Gene annotation
Transcriptome id Sobic.003G430600.1
Synonym Sb03g046230
Functional annotation OsCML19 - Calmodulin-related calcium sensor protein, expressed
UniProt C5XIH7
Pfam PF13499 PF13833
Panther DB PTHR10891 PTHR10891:SF613
NCBI CDD KOG0027; Calmodulin and related proteins (EF-Hand superfamily)
KEGG Orthology K13448; calcium-binding protein CML
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76640 : Calcium-binding EF-hand family protein
RAP-DB (Rice) LOC_Os01g72550.1 : OsCML19 - Calmodulin-related calcium sensor protein, expressed
MaizeGDB (Corn) Zm00025a039103
Brachypodium -
Barley -
Wheat TraesCS3B02G554100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
2 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.010G084300 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
5 Sobic.007G066932 - -
6 Sobic.002G195400 "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
7 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
8 Sobic.009G128700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
9 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.003G252800 hypothetical protein -
11 Sobic.003G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@WRKY27, expressed -
12 Sobic.003G437200 sulfotransferase domain containing protein, expressed -
13 Sobic.009G240600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed -
14 Sobic.003G417800 down-regulated TF in developmental senescence(PubMedID : 27586543)@histone-like transcription factor and archaeal histone, putative, expressed -
15 Sobic.007G067350 - -
16 Sobic.003G426300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.007G155100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
18 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
19 Sobic.010G185000 VQ domain containing protein, putative, expressed -
20 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G430600 Sobic003G430600 Sobic007G067600 Sobic007G067600 Sobic003G430600--Sobic007G067600 Sobic007G227300 Sobic007G227300 Sobic003G430600--Sobic007G227300 Sobic003G426000 Sobic003G426000 Sobic003G430600--Sobic003G426000 Sobic010G084300 Sobic010G084300 Sobic003G430600--Sobic010G084300 Sobic007G066932 Sobic007G066932 Sobic003G430600--Sobic007G066932 Sobic002G195400 Sobic002G195400 Sobic003G430600--Sobic002G195400 Sobic005G101800 Sobic005G101800 Sobic003G430600--Sobic005G101800 Sobic009G128700 Sobic009G128700 Sobic003G430600--Sobic009G128700 Sobic006G099900 Sobic006G099900 Sobic003G430600--Sobic006G099900 Sobic007G067600--Sobic002G195400 Sobic007G067600--Sobic007G066932 Sobic001G319700 Sobic001G319700 Sobic007G067600--Sobic001G319700 Sobic010G102300 Sobic010G102300 Sobic007G067600--Sobic010G102300 Sobic007G067600--Sobic005G101800 Sobic010G117900 Sobic010G117900 Sobic007G067600--Sobic010G117900 Sobic007G067600--Sobic003G430600 Sobic007G067600--Sobic003G426000 Sobic001G495164 Sobic001G495164 Sobic007G067600--Sobic001G495164 Sobic007G227300--Sobic006G099900 Sobic003G200700 Sobic003G200700 Sobic007G227300--Sobic003G200700 Sobic001G400800 Sobic001G400800 Sobic007G227300--Sobic001G400800 Sobic003G252800 Sobic003G252800 Sobic007G227300--Sobic003G252800 Sobic006G268800 Sobic006G268800 Sobic007G227300--Sobic006G268800 Sobic006G277600 Sobic006G277600 Sobic007G227300--Sobic006G277600 Sobic004G148200 Sobic004G148200 Sobic007G227300--Sobic004G148200 Sobic009G240600 Sobic009G240600 Sobic007G227300--Sobic009G240600 Sobic005G206601 Sobic005G206601 Sobic007G227300--Sobic005G206601 Sobic003G426000--Sobic002G195400 Sobic003G426000--Sobic009G128700 Sobic003G426000--Sobic007G067600 Sobic004G304300 Sobic004G304300 Sobic003G426000--Sobic004G304300 Sobic003G426000--Sobic003G430600 Sobic003G426300 Sobic003G426300 Sobic003G426000--Sobic003G426300 Sobic003G426000--Sobic005G101800 Sobic003G426000--Sobic001G319700 Sobic003G426000--Sobic003G200700 Sobic007G067350 Sobic007G067350 Sobic010G084300--Sobic007G067350 Sobic010G084300--Sobic003G430600 Sobic006G084600 Sobic006G084600 Sobic010G084300--Sobic006G084600 Sobic010G084300--Sobic003G200700 Sobic010G084300--Sobic007G066932 Sobic010G084300--Sobic007G227300 Sobic007G067400 Sobic007G067400 Sobic010G084300--Sobic007G067400 Sobic010G084300--Sobic009G240600 Sobic010G084300--Sobic007G067600 Sobic007G066932--Sobic007G067350 Sobic003G426100 Sobic003G426100 Sobic007G066932--Sobic003G426100 Sobic007G066932--Sobic002G195400 Sobic007G066932--Sobic010G102300 Sobic007G066932--Sobic007G067600 Sobic007G066932--Sobic004G304300 Sobic007G066932--Sobic001G319700 Sobic007G066932--Sobic006G084600 Sobic007G135201 Sobic007G135201 Sobic007G066932--Sobic007G135201 Sobic002G195400--Sobic007G067600 Sobic002G195400--Sobic001G319700 Sobic002G195400--Sobic003G426100 Sobic002G195400--Sobic007G066932 Sobic002G195400--Sobic010G102300 Sobic002G195400--Sobic003G426000 Sobic002G195400--Sobic007G067350 Sobic001G317000 Sobic001G317000 Sobic002G195400--Sobic001G317000 Sobic002G195400--Sobic004G304300 Sobic010G084400 Sobic010G084400 Sobic005G101800--Sobic010G084400 Sobic005G101800--Sobic010G117900 Sobic005G101800--Sobic003G252800 Sobic005G101800--Sobic007G227300 Sobic001G317200 Sobic001G317200 Sobic005G101800--Sobic001G317200 Sobic005G101800--Sobic003G426300 Sobic005G101800--Sobic006G099900 Sobic005G101800--Sobic009G128700 Sobic005G101800--Sobic001G400800 Sobic009G128700--Sobic010G084400 Sobic009G128700--Sobic003G252800 Sobic009G128700--Sobic003G426300 Sobic009G128700--Sobic005G101800 Sobic010G239300 Sobic010G239300 Sobic009G128700--Sobic010G239300 Sobic002G415100 Sobic002G415100 Sobic009G128700--Sobic002G415100 Sobic009G128700--Sobic003G426000 Sobic009G128700--Sobic006G099900 Sobic003G280200 Sobic003G280200 Sobic009G128700--Sobic003G280200 Sobic006G099900--Sobic007G227300 Sobic006G099900--Sobic003G252800 Sobic006G099900--Sobic001G317200 Sobic003G286600 Sobic003G286600 Sobic006G099900--Sobic003G286600 Sobic006G099900--Sobic010G084400 Sobic004G189400 Sobic004G189400 Sobic006G099900--Sobic004G189400 Sobic008G050600 Sobic008G050600 Sobic006G099900--Sobic008G050600 Sobic005G091500 Sobic005G091500 Sobic006G099900--Sobic005G091500 Sobic006G099900--Sobic006G277600
Octagon: transcription factors


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