Gene annotation
Transcriptome id Sobic.003G200700.1
Synonym WRKY9, ATWRKY9, Sb03g026280
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
WRKY27, expressed
UniProt C5XPF8
Pfam PF03106
Panther DB PTHR31429 PTHR31429:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G68150 : WRKY DNA-binding protein 9
RAP-DB (Rice) LOC_Os01g40430.1 : WRKY27, expressed
MaizeGDB (Corn) Zm00025a023096 , Zm00025a038416
Brachypodium -
Barley HORVU7Hr1G021260.1 , HORVU7Hr1G021260.2 , HORVU7Hr1G021260.3 , HORVU7Hr1G021260.6
Wheat TraesCS1B02G434300 , TraesCS7D02G092600 , TraesCS1D02G412500 , TraesCSU02G001200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.006G268800 transporter family protein, putative, expressed -
3 Sobic.010G211900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.004G148200 Cupin domain containing protein, expressed -
5 Sobic.003G264400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
8 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
9 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
10 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
11 Sobic.001G192200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.001G318600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.002G263400 expressed protein -
14 Sobic.010G084300 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
15 Sobic.002G139400 AP2 domain containing protein, expressed -
16 Sobic.004G148000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@Cupin domain containing protein, expressed -
17 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G018300 cytochrome P450 71E1, putative, expressed -
19 Sobic.004G189400 expressed protein -
20 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic003G200700 Sobic003G200700 Sobic007G227300 Sobic007G227300 Sobic003G200700--Sobic007G227300 Sobic006G268800 Sobic006G268800 Sobic003G200700--Sobic006G268800 Sobic010G211900 Sobic010G211900 Sobic003G200700--Sobic010G211900 Sobic004G148200 Sobic004G148200 Sobic003G200700--Sobic004G148200 Sobic003G264400 Sobic003G264400 Sobic003G200700--Sobic003G264400 Sobic006G099900 Sobic006G099900 Sobic003G200700--Sobic006G099900 Sobic001G231400 Sobic001G231400 Sobic003G200700--Sobic001G231400 Sobic005G101800 Sobic005G101800 Sobic003G200700--Sobic005G101800 Sobic004G243100 Sobic004G243100 Sobic003G200700--Sobic004G243100 Sobic007G227300--Sobic006G099900 Sobic007G227300--Sobic003G200700 Sobic001G400800 Sobic001G400800 Sobic007G227300--Sobic001G400800 Sobic003G252800 Sobic003G252800 Sobic007G227300--Sobic003G252800 Sobic007G227300--Sobic006G268800 Sobic006G277600 Sobic006G277600 Sobic007G227300--Sobic006G277600 Sobic007G227300--Sobic004G148200 Sobic009G240600 Sobic009G240600 Sobic007G227300--Sobic009G240600 Sobic005G206601 Sobic005G206601 Sobic007G227300--Sobic005G206601 Sobic006G103000 Sobic006G103000 Sobic006G268800--Sobic006G103000 Sobic006G268800--Sobic007G227300 Sobic006G268800--Sobic003G200700 Sobic006G268800--Sobic004G148200 Sobic001G402200 Sobic001G402200 Sobic006G268800--Sobic001G402200 Sobic006G268800--Sobic010G211900 Sobic001G318600 Sobic001G318600 Sobic006G268800--Sobic001G318600 Sobic009G145500 Sobic009G145500 Sobic006G268800--Sobic009G145500 Sobic001G331200 Sobic001G331200 Sobic006G268800--Sobic001G331200 Sobic010G211900--Sobic001G402200 Sobic010G211900--Sobic003G200700 Sobic010G211900--Sobic007G227300 Sobic010G211900--Sobic006G103000 Sobic010G211900--Sobic006G268800 Sobic010G211900--Sobic004G243100 Sobic001G018300 Sobic001G018300 Sobic010G211900--Sobic001G018300 Sobic001G367600 Sobic001G367600 Sobic010G211900--Sobic001G367600 Sobic010G042500 Sobic010G042500 Sobic010G211900--Sobic010G042500 Sobic005G029200 Sobic005G029200 Sobic004G148200--Sobic005G029200 Sobic002G055700 Sobic002G055700 Sobic004G148200--Sobic002G055700 Sobic004G189500 Sobic004G189500 Sobic004G148200--Sobic004G189500 Sobic004G148200--Sobic007G227300 Sobic004G189400 Sobic004G189400 Sobic004G148200--Sobic004G189400 Sobic003G303100 Sobic003G303100 Sobic004G148200--Sobic003G303100 Sobic004G148200--Sobic006G268800 Sobic004G148200--Sobic009G145500 Sobic004G148200--Sobic003G200700 Sobic003G264400--Sobic003G200700 Sobic003G264400--Sobic009G240600 Sobic003G264400--Sobic007G227300 Sobic001G192200 Sobic001G192200 Sobic003G264400--Sobic001G192200 Sobic001G231700 Sobic001G231700 Sobic003G264400--Sobic001G231700 Sobic003G264400--Sobic004G243100 Sobic003G264400--Sobic006G277600 Sobic008G063400 Sobic008G063400 Sobic003G264400--Sobic008G063400 Sobic001G114800 Sobic001G114800 Sobic003G264400--Sobic001G114800 Sobic006G099900--Sobic007G227300 Sobic006G099900--Sobic003G252800 Sobic001G317200 Sobic001G317200 Sobic006G099900--Sobic001G317200 Sobic003G286600 Sobic003G286600 Sobic006G099900--Sobic003G286600 Sobic010G084400 Sobic010G084400 Sobic006G099900--Sobic010G084400 Sobic006G099900--Sobic004G189400 Sobic008G050600 Sobic008G050600 Sobic006G099900--Sobic008G050600 Sobic005G091500 Sobic005G091500 Sobic006G099900--Sobic005G091500 Sobic006G099900--Sobic006G277600 Sobic001G231400--Sobic001G018300 Sobic001G231400--Sobic004G243100 Sobic002G192000 Sobic002G192000 Sobic001G231400--Sobic002G192000 Sobic002G251000 Sobic002G251000 Sobic001G231400--Sobic002G251000 Sobic001G318700 Sobic001G318700 Sobic001G231400--Sobic001G318700 Sobic002G263400 Sobic002G263400 Sobic001G231400--Sobic002G263400 Sobic001G231400--Sobic009G145500 Sobic001G231400--Sobic001G367600 Sobic002G139400 Sobic002G139400 Sobic001G231400--Sobic002G139400 Sobic005G101800--Sobic010G084400 Sobic010G117900 Sobic010G117900 Sobic005G101800--Sobic010G117900 Sobic005G101800--Sobic003G252800 Sobic005G101800--Sobic007G227300 Sobic005G101800--Sobic001G317200 Sobic003G426300 Sobic003G426300 Sobic005G101800--Sobic003G426300 Sobic005G101800--Sobic006G099900 Sobic009G128700 Sobic009G128700 Sobic005G101800--Sobic009G128700 Sobic005G101800--Sobic001G400800 Sobic004G243100--Sobic001G018300 Sobic004G243100--Sobic001G231400 Sobic009G224100 Sobic009G224100 Sobic004G243100--Sobic009G224100 Sobic001G423800 Sobic001G423800 Sobic004G243100--Sobic001G423800 Sobic004G243100--Sobic002G139400 Sobic004G243100--Sobic002G192000 Sobic004G243100--Sobic002G251000 Sobic003G282901 Sobic003G282901 Sobic004G243100--Sobic003G282901 Sobic004G243100--Sobic002G263400
Octagon: transcription factors


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