Gene annotation
Transcriptome id Sobic.001G192200.1
Synonym Sb01g016910, CYP76C2
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
cytochrome P450, putative, expressed
UniProt C5WVB4
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF75
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G45550 : cytochrome P450, family 76, subfamily C, polypeptide 4
RAP-DB (Rice) LOC_Os10g08540.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a017410 , Zm00025a006278
Brachypodium -
Barley HORVU2Hr1G116670.2 , HORVU2Hr1G116670.1
Wheat TraesCS2A02G546600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.002G251000 expressed protein -
3 Sobic.001G423800 DNA binding protein, putative, expressed -
4 Sobic.002G139400 AP2 domain containing protein, expressed -
5 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
7 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
8 Sobic.010G084100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
9 Sobic.003G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@WRKY27, expressed -
10 Sobic.009G240600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed -
11 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
13 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
14 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.003G282901 - -
17 Sobic.001G050100 Cupin domain containing protein, expressed -
18 Sobic.010G176600 - -
19 Sobic.004G301000 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
20 Sobic.003G264400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic001G192200 Sobic001G192200 Sobic004G243100 Sobic004G243100 Sobic001G192200--Sobic004G243100 Sobic002G251000 Sobic002G251000 Sobic001G192200--Sobic002G251000 Sobic001G423800 Sobic001G423800 Sobic001G192200--Sobic001G423800 Sobic002G139400 Sobic002G139400 Sobic001G192200--Sobic002G139400 Sobic007G227300 Sobic007G227300 Sobic001G192200--Sobic007G227300 Sobic009G224100 Sobic009G224100 Sobic001G192200--Sobic009G224100 Sobic010G084700 Sobic010G084700 Sobic001G192200--Sobic010G084700 Sobic010G084100 Sobic010G084100 Sobic001G192200--Sobic010G084100 Sobic003G200700 Sobic003G200700 Sobic001G192200--Sobic003G200700 Sobic001G018300 Sobic001G018300 Sobic004G243100--Sobic001G018300 Sobic001G231400 Sobic001G231400 Sobic004G243100--Sobic001G231400 Sobic004G243100--Sobic009G224100 Sobic004G243100--Sobic001G423800 Sobic004G243100--Sobic002G139400 Sobic002G192000 Sobic002G192000 Sobic004G243100--Sobic002G192000 Sobic004G243100--Sobic002G251000 Sobic003G282901 Sobic003G282901 Sobic004G243100--Sobic003G282901 Sobic002G263400 Sobic002G263400 Sobic004G243100--Sobic002G263400 Sobic002G251000--Sobic004G243100 Sobic001G318700 Sobic001G318700 Sobic002G251000--Sobic001G318700 Sobic002G251000--Sobic001G423800 Sobic002G251000--Sobic001G231400 Sobic002G251000--Sobic001G018300 Sobic002G251000--Sobic001G192200 Sobic002G251000--Sobic003G282901 Sobic002G140400 Sobic002G140400 Sobic002G251000--Sobic002G140400 Sobic004G189400 Sobic004G189400 Sobic002G251000--Sobic004G189400 Sobic001G423800--Sobic004G243100 Sobic001G423800--Sobic002G140400 Sobic001G038900 Sobic001G038900 Sobic001G423800--Sobic001G038900 Sobic001G119400 Sobic001G119400 Sobic001G423800--Sobic001G119400 Sobic001G423800--Sobic001G018300 Sobic007G155100 Sobic007G155100 Sobic001G423800--Sobic007G155100 Sobic008G136400 Sobic008G136400 Sobic001G423800--Sobic008G136400 Sobic002G393000 Sobic002G393000 Sobic001G423800--Sobic002G393000 Sobic001G423800--Sobic004G189400 Sobic002G139400--Sobic004G243100 Sobic002G139400--Sobic009G224100 Sobic002G184200 Sobic002G184200 Sobic002G139400--Sobic002G184200 Sobic002G139400--Sobic001G192200 Sobic002G139400--Sobic001G231400 Sobic002G139400--Sobic002G251000 Sobic002G139400--Sobic003G282901 Sobic002G139400--Sobic001G018300 Sobic002G139400--Sobic001G423800 Sobic006G099900 Sobic006G099900 Sobic007G227300--Sobic006G099900 Sobic007G227300--Sobic003G200700 Sobic001G400800 Sobic001G400800 Sobic007G227300--Sobic001G400800 Sobic003G252800 Sobic003G252800 Sobic007G227300--Sobic003G252800 Sobic006G268800 Sobic006G268800 Sobic007G227300--Sobic006G268800 Sobic006G277600 Sobic006G277600 Sobic007G227300--Sobic006G277600 Sobic004G148200 Sobic004G148200 Sobic007G227300--Sobic004G148200 Sobic009G240600 Sobic009G240600 Sobic007G227300--Sobic009G240600 Sobic005G206601 Sobic005G206601 Sobic007G227300--Sobic005G206601 Sobic009G224100--Sobic004G243100 Sobic009G224100--Sobic002G139400 Sobic009G224100--Sobic002G184200 Sobic008G187001 Sobic008G187001 Sobic009G224100--Sobic008G187001 Sobic007G155200 Sobic007G155200 Sobic009G224100--Sobic007G155200 Sobic009G224100--Sobic001G423800 Sobic002G388900 Sobic002G388900 Sobic009G224100--Sobic002G388900 Sobic009G224100--Sobic001G192200 Sobic001G330100 Sobic001G330100 Sobic009G224100--Sobic001G330100 Sobic004G221500 Sobic004G221500 Sobic010G084700--Sobic004G221500 Sobic010G084700--Sobic010G084100 Sobic010G117900 Sobic010G117900 Sobic010G084700--Sobic010G117900 Sobic010G084700--Sobic002G184200 Sobic010G176600 Sobic010G176600 Sobic010G084700--Sobic010G176600 Sobic003G286600 Sobic003G286600 Sobic010G084700--Sobic003G286600 Sobic001G348700 Sobic001G348700 Sobic010G084700--Sobic001G348700 Sobic010G084700--Sobic001G423800 Sobic010G084700--Sobic001G192200 Sobic010G084100--Sobic010G084700 Sobic004G071650 Sobic004G071650 Sobic010G084100--Sobic004G071650 Sobic005G045900 Sobic005G045900 Sobic010G084100--Sobic005G045900 Sobic010G084100--Sobic004G221500 Sobic010G084100--Sobic003G286600 Sobic010G084100--Sobic001G192200 Sobic010G084100--Sobic002G184200 Sobic007G067400 Sobic007G067400 Sobic010G084100--Sobic007G067400 Sobic010G084100--Sobic006G099900 Sobic003G200700--Sobic007G227300 Sobic003G200700--Sobic006G268800 Sobic010G211900 Sobic010G211900 Sobic003G200700--Sobic010G211900 Sobic003G200700--Sobic004G148200 Sobic003G264400 Sobic003G264400 Sobic003G200700--Sobic003G264400 Sobic003G200700--Sobic006G099900 Sobic003G200700--Sobic001G231400 Sobic005G101800 Sobic005G101800 Sobic003G200700--Sobic005G101800 Sobic003G200700--Sobic004G243100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.