Gene annotation
Transcriptome id Sobic.001G050100.1
Synonym GLP4, Sb01g004590
Functional annotation Cupin domain containing protein, expressed
UniProt C5WX01
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF46
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G18970 : germin-like protein 4
RAP-DB (Rice) LOC_Os03g58980.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a007679 , Zm00025a008627 , Zm00025a007677
Brachypodium -
Barley HORVU5Hr1G109190.1 , HORVU5Hr1G109190.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G063100 expressed protein -
2 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.005G018700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
5 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
6 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.001G192200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
8 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
9 Sobic.010G176600 - -
10 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
11 Sobic.009G234100 WRKY49, expressed -
12 Sobic.003G429000 NADPH quinone oxidoreductase, putative, expressed -
13 Sobic.004G189400 expressed protein -
14 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
16 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
17 Sobic.003G116800 cinnamoyl CoA reductase, putative, expressed K09753: cinnamoyl-CoA reductase
18 Sobic.009G151600 AP2 domain containing protein, expressed -
19 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
20 Sobic.003G117600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -


Gene co-expression network
sample Sobic001G050100 Sobic001G050100 Sobic005G063100 Sobic005G063100 Sobic001G050100--Sobic005G063100 Sobic001G367600 Sobic001G367600 Sobic001G050100--Sobic001G367600 Sobic002G140400 Sobic002G140400 Sobic001G050100--Sobic002G140400 Sobic005G018700 Sobic005G018700 Sobic001G050100--Sobic005G018700 Sobic004G237800 Sobic004G237800 Sobic001G050100--Sobic004G237800 Sobic006G103000 Sobic006G103000 Sobic001G050100--Sobic006G103000 Sobic001G192200 Sobic001G192200 Sobic001G050100--Sobic001G192200 Sobic005G091500 Sobic005G091500 Sobic001G050100--Sobic005G091500 Sobic010G176600 Sobic010G176600 Sobic001G050100--Sobic010G176600 Sobic008G050600 Sobic008G050600 Sobic005G063100--Sobic008G050600 Sobic003G345100 Sobic003G345100 Sobic005G063100--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic005G063100--Sobic003G286600 Sobic001G140900 Sobic001G140900 Sobic005G063100--Sobic001G140900 Sobic005G099000 Sobic005G099000 Sobic005G063100--Sobic005G099000 Sobic009G234100 Sobic009G234100 Sobic005G063100--Sobic009G234100 Sobic005G063100--Sobic005G091500 Sobic004G208700 Sobic004G208700 Sobic005G063100--Sobic004G208700 Sobic001G435000 Sobic001G435000 Sobic005G063100--Sobic001G435000 Sobic002G192000 Sobic002G192000 Sobic001G367600--Sobic002G192000 Sobic001G367600--Sobic001G140900 Sobic001G038900 Sobic001G038900 Sobic001G367600--Sobic001G038900 Sobic001G231700 Sobic001G231700 Sobic001G367600--Sobic001G231700 Sobic002G017800 Sobic002G017800 Sobic001G367600--Sobic002G017800 Sobic004G100700 Sobic004G100700 Sobic001G367600--Sobic004G100700 Sobic001G367600--Sobic006G103000 Sobic002G055700 Sobic002G055700 Sobic001G367600--Sobic002G055700 Sobic002G353900 Sobic002G353900 Sobic001G367600--Sobic002G353900 Sobic002G140400--Sobic001G038900 Sobic002G263400 Sobic002G263400 Sobic002G140400--Sobic002G263400 Sobic004G189400 Sobic004G189400 Sobic002G140400--Sobic004G189400 Sobic001G423800 Sobic001G423800 Sobic002G140400--Sobic001G423800 Sobic008G136400 Sobic008G136400 Sobic002G140400--Sobic008G136400 Sobic007G074000 Sobic007G074000 Sobic002G140400--Sobic007G074000 Sobic002G140400--Sobic004G237800 Sobic002G140400--Sobic008G050600 Sobic002G140400--Sobic003G286600 Sobic002G245100 Sobic002G245100 Sobic005G018700--Sobic002G245100 Sobic005G018700--Sobic002G017800 Sobic005G018700--Sobic006G103000 Sobic010G185000 Sobic010G185000 Sobic005G018700--Sobic010G185000 Sobic003G429000 Sobic003G429000 Sobic005G018700--Sobic003G429000 Sobic003G037800 Sobic003G037800 Sobic005G018700--Sobic003G037800 Sobic004G340900 Sobic004G340900 Sobic005G018700--Sobic004G340900 Sobic005G018700--Sobic001G050100 Sobic003G192100 Sobic003G192100 Sobic005G018700--Sobic003G192100 Sobic004G237800--Sobic007G074000 Sobic004G321300 Sobic004G321300 Sobic004G237800--Sobic004G321300 Sobic002G336600 Sobic002G336600 Sobic004G237800--Sobic002G336600 Sobic004G237800--Sobic004G189400 Sobic004G237800--Sobic002G055700 Sobic004G237800--Sobic002G140400 Sobic004G237800--Sobic005G091500 Sobic001G112200 Sobic001G112200 Sobic004G237800--Sobic001G112200 Sobic004G237800--Sobic005G063100 Sobic001G402200 Sobic001G402200 Sobic006G103000--Sobic001G402200 Sobic006G268800 Sobic006G268800 Sobic006G103000--Sobic006G268800 Sobic006G103000--Sobic001G231700 Sobic006G103000--Sobic001G367600 Sobic009G240600 Sobic009G240600 Sobic006G103000--Sobic009G240600 Sobic010G211900 Sobic010G211900 Sobic006G103000--Sobic010G211900 Sobic003G007600 Sobic003G007600 Sobic006G103000--Sobic003G007600 Sobic007G227300 Sobic007G227300 Sobic006G103000--Sobic007G227300 Sobic001G500000 Sobic001G500000 Sobic006G103000--Sobic001G500000 Sobic004G243100 Sobic004G243100 Sobic001G192200--Sobic004G243100 Sobic002G251000 Sobic002G251000 Sobic001G192200--Sobic002G251000 Sobic001G192200--Sobic001G423800 Sobic002G139400 Sobic002G139400 Sobic001G192200--Sobic002G139400 Sobic001G192200--Sobic007G227300 Sobic009G224100 Sobic009G224100 Sobic001G192200--Sobic009G224100 Sobic010G084700 Sobic010G084700 Sobic001G192200--Sobic010G084700 Sobic010G084100 Sobic010G084100 Sobic001G192200--Sobic010G084100 Sobic003G200700 Sobic003G200700 Sobic001G192200--Sobic003G200700 Sobic005G091500--Sobic004G189400 Sobic005G091500--Sobic004G237800 Sobic005G091500--Sobic005G063100 Sobic005G091500--Sobic008G050600 Sobic005G091500--Sobic002G055700 Sobic006G099900 Sobic006G099900 Sobic005G091500--Sobic006G099900 Sobic003G382600 Sobic003G382600 Sobic005G091500--Sobic003G382600 Sobic009G159400 Sobic009G159400 Sobic005G091500--Sobic009G159400 Sobic005G091500--Sobic003G286600 Sobic010G176600--Sobic003G286600 Sobic010G176600--Sobic005G063100 Sobic010G176600--Sobic002G140400 Sobic010G176600--Sobic008G050600 Sobic010G176600--Sobic001G423800 Sobic010G176600--Sobic009G234100 Sobic010G176600--Sobic010G084700 Sobic003G116800 Sobic003G116800 Sobic010G176600--Sobic003G116800 Sobic010G176600--Sobic004G189400
Octagon: transcription factors


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