Gene annotation
Transcriptome id Sobic.006G268800.1
Synonym Sb06g033060
Functional annotation transporter family protein, putative, expressed
UniProt A0A1Z5RFR3
Pfam PF00083
Panther DB PTHR23500 PTHR23500:SF155
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G20780 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g58230.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a009280 , Zm00025a009278
Brachypodium KQJ85315 , KQJ85317 , KQJ85316 , KQJ85318
Barley HORVU2Hr1G118870.4 , HORVU2Hr1G118870.3 , HORVU2Hr1G118870.2 , HORVU2Hr1G118870.1 , HORVU4Hr1G071000.2 , HORVU4Hr1G071000.1 , HORVU1Hr1G035360.4 , HORVU1Hr1G035360.2 , HORVU1Hr1G035360.3 , HORVU1Hr1G035360.1
Wheat TraesCS2B02G593500 , TraesCS2A02G590400 , TraesCS4A02G042100 , TraesCS2D02G564100 , TraesCS2D02G564400 , TraesCS2B02G594000 , TraesCS4D02G263000 , TraesCS4B02G262900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.003G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@WRKY27, expressed -
4 Sobic.004G148200 Cupin domain containing protein, expressed -
5 Sobic.001G402200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed -
6 Sobic.010G211900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.001G318600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.001G331200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
10 Sobic.001G187200 expressed protein -
11 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
12 Sobic.006G277600 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.001G400800 pathogenesis-related Bet v I family protein, putative, expressed -
14 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
15 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.001G318500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.005G011200 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.003G007600 expressed protein -
19 Sobic.005G051500 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic006G268800 Sobic006G268800 Sobic006G103000 Sobic006G103000 Sobic006G268800--Sobic006G103000 Sobic007G227300 Sobic007G227300 Sobic006G268800--Sobic007G227300 Sobic003G200700 Sobic003G200700 Sobic006G268800--Sobic003G200700 Sobic004G148200 Sobic004G148200 Sobic006G268800--Sobic004G148200 Sobic001G402200 Sobic001G402200 Sobic006G268800--Sobic001G402200 Sobic010G211900 Sobic010G211900 Sobic006G268800--Sobic010G211900 Sobic001G318600 Sobic001G318600 Sobic006G268800--Sobic001G318600 Sobic009G145500 Sobic009G145500 Sobic006G268800--Sobic009G145500 Sobic001G331200 Sobic001G331200 Sobic006G268800--Sobic001G331200 Sobic006G103000--Sobic001G402200 Sobic006G103000--Sobic006G268800 Sobic001G231700 Sobic001G231700 Sobic006G103000--Sobic001G231700 Sobic001G367600 Sobic001G367600 Sobic006G103000--Sobic001G367600 Sobic009G240600 Sobic009G240600 Sobic006G103000--Sobic009G240600 Sobic006G103000--Sobic010G211900 Sobic003G007600 Sobic003G007600 Sobic006G103000--Sobic003G007600 Sobic006G103000--Sobic007G227300 Sobic001G500000 Sobic001G500000 Sobic006G103000--Sobic001G500000 Sobic006G099900 Sobic006G099900 Sobic007G227300--Sobic006G099900 Sobic007G227300--Sobic003G200700 Sobic001G400800 Sobic001G400800 Sobic007G227300--Sobic001G400800 Sobic003G252800 Sobic003G252800 Sobic007G227300--Sobic003G252800 Sobic007G227300--Sobic006G268800 Sobic006G277600 Sobic006G277600 Sobic007G227300--Sobic006G277600 Sobic007G227300--Sobic004G148200 Sobic007G227300--Sobic009G240600 Sobic005G206601 Sobic005G206601 Sobic007G227300--Sobic005G206601 Sobic003G200700--Sobic007G227300 Sobic003G200700--Sobic006G268800 Sobic003G200700--Sobic010G211900 Sobic003G200700--Sobic004G148200 Sobic003G264400 Sobic003G264400 Sobic003G200700--Sobic003G264400 Sobic003G200700--Sobic006G099900 Sobic001G231400 Sobic001G231400 Sobic003G200700--Sobic001G231400 Sobic005G101800 Sobic005G101800 Sobic003G200700--Sobic005G101800 Sobic004G243100 Sobic004G243100 Sobic003G200700--Sobic004G243100 Sobic005G029200 Sobic005G029200 Sobic004G148200--Sobic005G029200 Sobic002G055700 Sobic002G055700 Sobic004G148200--Sobic002G055700 Sobic004G189500 Sobic004G189500 Sobic004G148200--Sobic004G189500 Sobic004G148200--Sobic007G227300 Sobic004G189400 Sobic004G189400 Sobic004G148200--Sobic004G189400 Sobic003G303100 Sobic003G303100 Sobic004G148200--Sobic003G303100 Sobic004G148200--Sobic006G268800 Sobic004G148200--Sobic009G145500 Sobic004G148200--Sobic003G200700 Sobic001G402200--Sobic001G231700 Sobic001G402200--Sobic006G103000 Sobic007G155100 Sobic007G155100 Sobic001G402200--Sobic007G155100 Sobic001G402200--Sobic010G211900 Sobic001G402200--Sobic001G367600 Sobic010G042500 Sobic010G042500 Sobic001G402200--Sobic010G042500 Sobic001G402200--Sobic006G268800 Sobic001G402200--Sobic007G227300 Sobic001G018300 Sobic001G018300 Sobic001G402200--Sobic001G018300 Sobic010G211900--Sobic001G402200 Sobic010G211900--Sobic003G200700 Sobic010G211900--Sobic007G227300 Sobic010G211900--Sobic006G103000 Sobic010G211900--Sobic006G268800 Sobic010G211900--Sobic004G243100 Sobic010G211900--Sobic001G018300 Sobic010G211900--Sobic001G367600 Sobic010G211900--Sobic010G042500 Sobic005G101700 Sobic005G101700 Sobic001G318600--Sobic005G101700 Sobic005G101600 Sobic005G101600 Sobic001G318600--Sobic005G101600 Sobic001G318600--Sobic006G268800 Sobic001G318600--Sobic007G227300 Sobic001G318600--Sobic003G200700 Sobic001G318600--Sobic004G148200 Sobic001G318600--Sobic001G400800 Sobic010G084400 Sobic010G084400 Sobic001G318600--Sobic010G084400 Sobic010G084100 Sobic010G084100 Sobic001G318600--Sobic010G084100 Sobic003G043600 Sobic003G043600 Sobic009G145500--Sobic003G043600 Sobic003G073380 Sobic003G073380 Sobic009G145500--Sobic003G073380 Sobic009G145500--Sobic004G148200 Sobic009G145500--Sobic001G231400 Sobic003G268600 Sobic003G268600 Sobic009G145500--Sobic003G268600 Sobic002G338500 Sobic002G338500 Sobic009G145500--Sobic002G338500 Sobic006G235000 Sobic006G235000 Sobic009G145500--Sobic006G235000 Sobic009G145600 Sobic009G145600 Sobic009G145500--Sobic009G145600 Sobic009G145500--Sobic006G268800 Sobic001G331200--Sobic004G148200 Sobic001G331200--Sobic006G268800 Sobic002G017800 Sobic002G017800 Sobic001G331200--Sobic002G017800 Sobic001G331200--Sobic007G227300 Sobic002G247600 Sobic002G247600 Sobic001G331200--Sobic002G247600 Sobic001G331200--Sobic006G103000 Sobic009G111000 Sobic009G111000 Sobic001G331200--Sobic009G111000 Sobic001G318500 Sobic001G318500 Sobic001G331200--Sobic001G318500 Sobic005G091500 Sobic005G091500 Sobic001G331200--Sobic005G091500
Octagon: transcription factors


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