Gene annotation
Transcriptome id Sobic.001G402200.1
Synonym Sb01g038050
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed
UniProt Q2EFE7 , C5WNF1
Pfam PF13561
Panther DB PTHR24322 PTHR24322:SF309
NCBI CDD KOG0725; Reductases with broad range of substrate specificities
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51680 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os03g18740.1 : oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed
MaizeGDB (Corn) Zm00025a002053 , Zm00025a052619
Brachypodium KQK22073
Barley HORVU2Hr1G015150.1 , HORVU2Hr1G015180.3 , HORVU2Hr1G015180.2 , HORVU2Hr1G015180.1 , HORVU4Hr1G054980.1
Wheat TraesCS2B02G106400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
2 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.007G155100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
4 Sobic.010G211900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G042500 expressed protein -
7 Sobic.006G268800 transporter family protein, putative, expressed -
8 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.001G018300 cytochrome P450 71E1, putative, expressed -
10 Sobic.010G259500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
11 Sobic.002G017800 expressed protein -
12 Sobic.006G234800 expressed protein -
13 Sobic.006G277600 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.009G240600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed -
15 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
17 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
18 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
19 Sobic.001G187200 expressed protein -
20 Sobic.003G007600 expressed protein -


Gene co-expression network
sample Sobic001G402200 Sobic001G402200 Sobic001G231700 Sobic001G231700 Sobic001G402200--Sobic001G231700 Sobic006G103000 Sobic006G103000 Sobic001G402200--Sobic006G103000 Sobic007G155100 Sobic007G155100 Sobic001G402200--Sobic007G155100 Sobic010G211900 Sobic010G211900 Sobic001G402200--Sobic010G211900 Sobic001G367600 Sobic001G367600 Sobic001G402200--Sobic001G367600 Sobic010G042500 Sobic010G042500 Sobic001G402200--Sobic010G042500 Sobic006G268800 Sobic006G268800 Sobic001G402200--Sobic006G268800 Sobic007G227300 Sobic007G227300 Sobic001G402200--Sobic007G227300 Sobic001G018300 Sobic001G018300 Sobic001G402200--Sobic001G018300 Sobic006G277600 Sobic006G277600 Sobic001G231700--Sobic006G277600 Sobic001G231700--Sobic001G402200 Sobic001G231700--Sobic001G367600 Sobic001G231700--Sobic006G103000 Sobic009G240600 Sobic009G240600 Sobic001G231700--Sobic009G240600 Sobic006G234800 Sobic006G234800 Sobic001G231700--Sobic006G234800 Sobic001G481400 Sobic001G481400 Sobic001G231700--Sobic001G481400 Sobic001G500000 Sobic001G500000 Sobic001G231700--Sobic001G500000 Sobic002G188900 Sobic002G188900 Sobic001G231700--Sobic002G188900 Sobic006G103000--Sobic001G402200 Sobic006G103000--Sobic006G268800 Sobic006G103000--Sobic001G231700 Sobic006G103000--Sobic001G367600 Sobic006G103000--Sobic009G240600 Sobic006G103000--Sobic010G211900 Sobic003G007600 Sobic003G007600 Sobic006G103000--Sobic003G007600 Sobic006G103000--Sobic007G227300 Sobic006G103000--Sobic001G500000 Sobic001G423800 Sobic001G423800 Sobic007G155100--Sobic001G423800 Sobic007G155100--Sobic001G402200 Sobic007G155100--Sobic001G018300 Sobic001G365100 Sobic001G365100 Sobic007G155100--Sobic001G365100 Sobic004G243100 Sobic004G243100 Sobic007G155100--Sobic004G243100 Sobic006G084600 Sobic006G084600 Sobic007G155100--Sobic006G084600 Sobic010G066700 Sobic010G066700 Sobic007G155100--Sobic010G066700 Sobic004G221500 Sobic004G221500 Sobic007G155100--Sobic004G221500 Sobic002G184200 Sobic002G184200 Sobic007G155100--Sobic002G184200 Sobic010G211900--Sobic001G402200 Sobic003G200700 Sobic003G200700 Sobic010G211900--Sobic003G200700 Sobic010G211900--Sobic007G227300 Sobic010G211900--Sobic006G103000 Sobic010G211900--Sobic006G268800 Sobic010G211900--Sobic004G243100 Sobic010G211900--Sobic001G018300 Sobic010G211900--Sobic001G367600 Sobic010G211900--Sobic010G042500 Sobic002G192000 Sobic002G192000 Sobic001G367600--Sobic002G192000 Sobic001G140900 Sobic001G140900 Sobic001G367600--Sobic001G140900 Sobic001G038900 Sobic001G038900 Sobic001G367600--Sobic001G038900 Sobic001G367600--Sobic001G231700 Sobic002G017800 Sobic002G017800 Sobic001G367600--Sobic002G017800 Sobic004G100700 Sobic004G100700 Sobic001G367600--Sobic004G100700 Sobic001G367600--Sobic006G103000 Sobic002G055700 Sobic002G055700 Sobic001G367600--Sobic002G055700 Sobic002G353900 Sobic002G353900 Sobic001G367600--Sobic002G353900 Sobic010G042500--Sobic004G243100 Sobic010G042500--Sobic001G018300 Sobic010G042500--Sobic001G402200 Sobic010G042500--Sobic010G211900 Sobic010G042500--Sobic007G155100 Sobic001G231400 Sobic001G231400 Sobic010G042500--Sobic001G231400 Sobic010G042500--Sobic003G200700 Sobic002G139400 Sobic002G139400 Sobic010G042500--Sobic002G139400 Sobic009G224100 Sobic009G224100 Sobic010G042500--Sobic009G224100 Sobic006G268800--Sobic006G103000 Sobic006G268800--Sobic007G227300 Sobic006G268800--Sobic003G200700 Sobic004G148200 Sobic004G148200 Sobic006G268800--Sobic004G148200 Sobic006G268800--Sobic001G402200 Sobic006G268800--Sobic010G211900 Sobic001G318600 Sobic001G318600 Sobic006G268800--Sobic001G318600 Sobic009G145500 Sobic009G145500 Sobic006G268800--Sobic009G145500 Sobic001G331200 Sobic001G331200 Sobic006G268800--Sobic001G331200 Sobic006G099900 Sobic006G099900 Sobic007G227300--Sobic006G099900 Sobic007G227300--Sobic003G200700 Sobic001G400800 Sobic001G400800 Sobic007G227300--Sobic001G400800 Sobic003G252800 Sobic003G252800 Sobic007G227300--Sobic003G252800 Sobic007G227300--Sobic006G268800 Sobic007G227300--Sobic006G277600 Sobic007G227300--Sobic004G148200 Sobic007G227300--Sobic009G240600 Sobic005G206601 Sobic005G206601 Sobic007G227300--Sobic005G206601 Sobic001G018300--Sobic004G243100 Sobic001G018300--Sobic001G231400 Sobic001G018300--Sobic002G192000 Sobic001G318700 Sobic001G318700 Sobic001G018300--Sobic001G318700 Sobic001G018300--Sobic001G423800 Sobic002G263400 Sobic002G263400 Sobic001G018300--Sobic002G263400 Sobic004G229800 Sobic004G229800 Sobic001G018300--Sobic004G229800 Sobic001G018300--Sobic001G367600 Sobic001G018300--Sobic007G155100
Octagon: transcription factors


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