Gene annotation
Transcriptome id Sobic.001G187200.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QJQ6
Pfam PF03647
Panther DB PTHR12668 PTHR12668:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT3G20510 : Transmembrane proteins 14C
RAP-DB (Rice) LOC_Os03g37090.1 : expressed protein
MaizeGDB (Corn) Zm00025a017384 , Zm00025a007070
Brachypodium KQK14371
Barley -
Wheat TraesCS7D02G191200 , TraesCS7B02G095100 , TraesCS7A02G190000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G177800 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
2 Sobic.006G268800 transporter family protein, putative, expressed -
3 Sobic.005G011200 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.001G400800 pathogenesis-related Bet v I family protein, putative, expressed -
5 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.001G402200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed -
7 Sobic.003G307801 - -
8 Sobic.004G148200 Cupin domain containing protein, expressed -
9 Sobic.007G061300 - -
10 Sobic.010G009300 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
11 Sobic.004G245800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.004G189400 expressed protein -
13 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.005G051500 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
16 Sobic.001G318500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.003G252800 hypothetical protein -
18 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.006G277600 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase


Gene co-expression network
sample Sobic001G187200 Sobic001G187200 Sobic001G177800 Sobic001G177800 Sobic001G187200--Sobic001G177800 Sobic006G268800 Sobic006G268800 Sobic001G187200--Sobic006G268800 Sobic005G011200 Sobic005G011200 Sobic001G187200--Sobic005G011200 Sobic001G400800 Sobic001G400800 Sobic001G187200--Sobic001G400800 Sobic007G227300 Sobic007G227300 Sobic001G187200--Sobic007G227300 Sobic001G402200 Sobic001G402200 Sobic001G187200--Sobic001G402200 Sobic003G307801 Sobic003G307801 Sobic001G187200--Sobic003G307801 Sobic004G148200 Sobic004G148200 Sobic001G187200--Sobic004G148200 Sobic007G061300 Sobic007G061300 Sobic001G187200--Sobic007G061300 Sobic007G184600 Sobic007G184600 Sobic001G177800--Sobic007G184600 Sobic009G139400 Sobic009G139400 Sobic001G177800--Sobic009G139400 Sobic001G374700 Sobic001G374700 Sobic001G177800--Sobic001G374700 Sobic001G402050 Sobic001G402050 Sobic001G177800--Sobic001G402050 Sobic001G177800--Sobic007G227300 Sobic002G200600 Sobic002G200600 Sobic001G177800--Sobic002G200600 Sobic004G189400 Sobic004G189400 Sobic001G177800--Sobic004G189400 Sobic006G099900 Sobic006G099900 Sobic001G177800--Sobic006G099900 Sobic010G009300 Sobic010G009300 Sobic001G177800--Sobic010G009300 Sobic006G103000 Sobic006G103000 Sobic006G268800--Sobic006G103000 Sobic006G268800--Sobic007G227300 Sobic003G200700 Sobic003G200700 Sobic006G268800--Sobic003G200700 Sobic006G268800--Sobic004G148200 Sobic006G268800--Sobic001G402200 Sobic010G211900 Sobic010G211900 Sobic006G268800--Sobic010G211900 Sobic001G318600 Sobic001G318600 Sobic006G268800--Sobic001G318600 Sobic009G145500 Sobic009G145500 Sobic006G268800--Sobic009G145500 Sobic001G331200 Sobic001G331200 Sobic006G268800--Sobic001G331200 Sobic001G333400 Sobic001G333400 Sobic005G011200--Sobic001G333400 Sobic005G051500 Sobic005G051500 Sobic005G011200--Sobic005G051500 Sobic005G011200--Sobic001G187200 Sobic005G011200--Sobic006G268800 Sobic002G004900 Sobic002G004900 Sobic005G011200--Sobic002G004900 Sobic010G052700 Sobic010G052700 Sobic005G011200--Sobic010G052700 Sobic005G011200--Sobic001G400800 Sobic003G252800 Sobic003G252800 Sobic005G011200--Sobic003G252800 Sobic002G336700 Sobic002G336700 Sobic005G011200--Sobic002G336700 Sobic001G400800--Sobic007G227300 Sobic001G400700 Sobic001G400700 Sobic001G400800--Sobic001G400700 Sobic004G245800 Sobic004G245800 Sobic001G400800--Sobic004G245800 Sobic005G101800 Sobic005G101800 Sobic001G400800--Sobic005G101800 Sobic001G400800--Sobic003G252800 Sobic001G400800--Sobic001G177800 Sobic001G400800--Sobic006G099900 Sobic010G084400 Sobic010G084400 Sobic001G400800--Sobic010G084400 Sobic001G400800--Sobic001G187200 Sobic007G227300--Sobic006G099900 Sobic007G227300--Sobic003G200700 Sobic007G227300--Sobic001G400800 Sobic007G227300--Sobic003G252800 Sobic007G227300--Sobic006G268800 Sobic006G277600 Sobic006G277600 Sobic007G227300--Sobic006G277600 Sobic007G227300--Sobic004G148200 Sobic009G240600 Sobic009G240600 Sobic007G227300--Sobic009G240600 Sobic005G206601 Sobic005G206601 Sobic007G227300--Sobic005G206601 Sobic001G231700 Sobic001G231700 Sobic001G402200--Sobic001G231700 Sobic001G402200--Sobic006G103000 Sobic007G155100 Sobic007G155100 Sobic001G402200--Sobic007G155100 Sobic001G402200--Sobic010G211900 Sobic001G367600 Sobic001G367600 Sobic001G402200--Sobic001G367600 Sobic010G042500 Sobic010G042500 Sobic001G402200--Sobic010G042500 Sobic001G402200--Sobic006G268800 Sobic001G402200--Sobic007G227300 Sobic001G018300 Sobic001G018300 Sobic001G402200--Sobic001G018300 Sobic003G307801--Sobic005G051500 Sobic010G259500 Sobic010G259500 Sobic003G307801--Sobic010G259500 Sobic003G307801--Sobic001G187200 Sobic002G263400 Sobic002G263400 Sobic003G307801--Sobic002G263400 Sobic003G307801--Sobic009G145500 Sobic003G307801--Sobic006G268800 Sobic001G231400 Sobic001G231400 Sobic003G307801--Sobic001G231400 Sobic003G307801--Sobic001G018300 Sobic003G307801--Sobic001G402200 Sobic005G029200 Sobic005G029200 Sobic004G148200--Sobic005G029200 Sobic002G055700 Sobic002G055700 Sobic004G148200--Sobic002G055700 Sobic004G189500 Sobic004G189500 Sobic004G148200--Sobic004G189500 Sobic004G148200--Sobic007G227300 Sobic004G148200--Sobic004G189400 Sobic003G303100 Sobic003G303100 Sobic004G148200--Sobic003G303100 Sobic004G148200--Sobic006G268800 Sobic004G148200--Sobic009G145500 Sobic004G148200--Sobic003G200700 Sobic007G061300--Sobic004G189400 Sobic007G061300--Sobic002G263400 Sobic007G061300--Sobic001G187200 Sobic004G148000 Sobic004G148000 Sobic007G061300--Sobic004G148000 Sobic007G061300--Sobic004G148200 Sobic007G061300--Sobic005G029200 Sobic004G088551 Sobic004G088551 Sobic007G061300--Sobic004G088551 Sobic007G061300--Sobic010G084400 Sobic007G061300--Sobic007G227300
Octagon: transcription factors


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