Gene annotation
Transcriptome id Sobic.007G061300.1
Synonym
Functional annotation -
UniProt A0A1B6PFX2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G189400 expressed protein -
2 Sobic.002G263400 expressed protein -
3 Sobic.001G187200 expressed protein -
4 Sobic.004G148000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@Cupin domain containing protein, expressed -
5 Sobic.004G148200 Cupin domain containing protein, expressed -
6 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
7 Sobic.004G088551 - -
8 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
9 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.001G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.003G430400 OsCML31 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
12 Sobic.003G417700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
13 Sobic.002G117100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
14 Sobic.003G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@WRKY27, expressed -
15 Sobic.004G189500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.001G177800 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
17 Sobic.004G245800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.003G252800 hypothetical protein -
20 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -


Gene co-expression network
sample Sobic007G061300 Sobic007G061300 Sobic004G189400 Sobic004G189400 Sobic007G061300--Sobic004G189400 Sobic002G263400 Sobic002G263400 Sobic007G061300--Sobic002G263400 Sobic001G187200 Sobic001G187200 Sobic007G061300--Sobic001G187200 Sobic004G148000 Sobic004G148000 Sobic007G061300--Sobic004G148000 Sobic004G148200 Sobic004G148200 Sobic007G061300--Sobic004G148200 Sobic005G029200 Sobic005G029200 Sobic007G061300--Sobic005G029200 Sobic004G088551 Sobic004G088551 Sobic007G061300--Sobic004G088551 Sobic010G084400 Sobic010G084400 Sobic007G061300--Sobic010G084400 Sobic007G227300 Sobic007G227300 Sobic007G061300--Sobic007G227300 Sobic002G140400 Sobic002G140400 Sobic004G189400--Sobic002G140400 Sobic005G091500 Sobic005G091500 Sobic004G189400--Sobic005G091500 Sobic004G189400--Sobic002G263400 Sobic008G050600 Sobic008G050600 Sobic004G189400--Sobic008G050600 Sobic004G237800 Sobic004G237800 Sobic004G189400--Sobic004G237800 Sobic003G382600 Sobic003G382600 Sobic004G189400--Sobic003G382600 Sobic006G099900 Sobic006G099900 Sobic004G189400--Sobic006G099900 Sobic008G136400 Sobic008G136400 Sobic004G189400--Sobic008G136400 Sobic004G189400--Sobic005G029200 Sobic002G263400--Sobic002G140400 Sobic002G263400--Sobic004G189400 Sobic003G282901 Sobic003G282901 Sobic002G263400--Sobic003G282901 Sobic004G243100 Sobic004G243100 Sobic002G263400--Sobic004G243100 Sobic001G018300 Sobic001G018300 Sobic002G263400--Sobic001G018300 Sobic001G423800 Sobic001G423800 Sobic002G263400--Sobic001G423800 Sobic002G192000 Sobic002G192000 Sobic002G263400--Sobic002G192000 Sobic001G231400 Sobic001G231400 Sobic002G263400--Sobic001G231400 Sobic003G322900 Sobic003G322900 Sobic002G263400--Sobic003G322900 Sobic001G177800 Sobic001G177800 Sobic001G187200--Sobic001G177800 Sobic006G268800 Sobic006G268800 Sobic001G187200--Sobic006G268800 Sobic005G011200 Sobic005G011200 Sobic001G187200--Sobic005G011200 Sobic001G400800 Sobic001G400800 Sobic001G187200--Sobic001G400800 Sobic001G187200--Sobic007G227300 Sobic001G402200 Sobic001G402200 Sobic001G187200--Sobic001G402200 Sobic003G307801 Sobic003G307801 Sobic001G187200--Sobic003G307801 Sobic001G187200--Sobic004G148200 Sobic001G187200--Sobic007G061300 Sobic004G148000--Sobic002G263400 Sobic004G148000--Sobic004G189400 Sobic003G200700 Sobic003G200700 Sobic004G148000--Sobic003G200700 Sobic004G148000--Sobic004G148200 Sobic004G148000--Sobic007G061300 Sobic004G148000--Sobic008G136400 Sobic004G148000--Sobic003G322900 Sobic004G148000--Sobic002G140400 Sobic002G055600 Sobic002G055600 Sobic004G148000--Sobic002G055600 Sobic004G148200--Sobic005G029200 Sobic002G055700 Sobic002G055700 Sobic004G148200--Sobic002G055700 Sobic004G189500 Sobic004G189500 Sobic004G148200--Sobic004G189500 Sobic004G148200--Sobic007G227300 Sobic004G148200--Sobic004G189400 Sobic003G303100 Sobic003G303100 Sobic004G148200--Sobic003G303100 Sobic004G148200--Sobic006G268800 Sobic009G145500 Sobic009G145500 Sobic004G148200--Sobic009G145500 Sobic004G148200--Sobic003G200700 Sobic005G029200--Sobic004G189400 Sobic005G029200--Sobic004G148200 Sobic003G297600 Sobic003G297600 Sobic005G029200--Sobic003G297600 Sobic010G213700 Sobic010G213700 Sobic005G029200--Sobic010G213700 Sobic005G029200--Sobic002G055700 Sobic005G029200--Sobic003G303100 Sobic009G077800 Sobic009G077800 Sobic005G029200--Sobic009G077800 Sobic009G139400 Sobic009G139400 Sobic005G029200--Sobic009G139400 Sobic005G029200--Sobic001G423800 Sobic001G317000 Sobic001G317000 Sobic004G088551--Sobic001G317000 Sobic002G195400 Sobic002G195400 Sobic004G088551--Sobic002G195400 Sobic005G101800 Sobic005G101800 Sobic004G088551--Sobic005G101800 Sobic007G067600 Sobic007G067600 Sobic004G088551--Sobic007G067600 Sobic010G117900 Sobic010G117900 Sobic004G088551--Sobic010G117900 Sobic001G317200 Sobic001G317200 Sobic004G088551--Sobic001G317200 Sobic004G088551--Sobic001G423800 Sobic004G088551--Sobic007G061300 Sobic004G112300 Sobic004G112300 Sobic004G088551--Sobic004G112300 Sobic003G252800 Sobic003G252800 Sobic010G084400--Sobic003G252800 Sobic010G084400--Sobic005G101800 Sobic010G084400--Sobic006G099900 Sobic010G084400--Sobic001G317200 Sobic009G128700 Sobic009G128700 Sobic010G084400--Sobic009G128700 Sobic010G084400--Sobic007G227300 Sobic010G084400--Sobic010G117900 Sobic010G239300 Sobic010G239300 Sobic010G084400--Sobic010G239300 Sobic010G084400--Sobic004G189400 Sobic007G227300--Sobic006G099900 Sobic007G227300--Sobic003G200700 Sobic007G227300--Sobic001G400800 Sobic007G227300--Sobic003G252800 Sobic007G227300--Sobic006G268800 Sobic006G277600 Sobic006G277600 Sobic007G227300--Sobic006G277600 Sobic007G227300--Sobic004G148200 Sobic009G240600 Sobic009G240600 Sobic007G227300--Sobic009G240600 Sobic005G206601 Sobic005G206601 Sobic007G227300--Sobic005G206601
Octagon: transcription factors


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