Gene annotation
Transcriptome id Sobic.003G430400.1
Synonym Sb03g046210
Functional annotation OsCML31 - Calmodulin-related calcium sensor protein, expressed
UniProt C5XIH5
Pfam PF13833
Panther DB PTHR10891 PTHR10891:SF613
NCBI CDD KOG0027; Calmodulin and related proteins (EF-Hand superfamily)
KEGG Orthology K13448; calcium-binding protein CML
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76640 : Calcium-binding EF-hand family protein
RAP-DB (Rice) LOC_Os01g72530.1 : OsCML31 - Calmodulin-related calcium sensor protein, expressed
MaizeGDB (Corn) Zm00025a025935
Brachypodium KQK11607
Barley HORVU3Hr1G109230.1 , HORVU3Hr1G109180.1 , HORVU3Hr1G109220.1 , HORVU3Hr1G109220.2 , HORVU3Hr1G107090.2 , HORVU3Hr1G107090.3
Wheat TraesCS3D02G499800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G263400 expressed protein -
2 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -
4 Sobic.006G066200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@prephenate dehydratase domain containing protein, expressed K05359: ADT, arogenate/prephenate dehydratase
5 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
7 Sobic.003G092900 expressed protein -
8 Sobic.002G356101 - -
9 Sobic.004G222500 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
10 Sobic.002G245100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
11 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
12 Sobic.002G359300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-07 - C2H2 zinc finger protein, expressed -
13 Sobic.006G179500 protein kinase APK1B, chloroplast precursor, putative, expressed -
14 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
15 Sobic.001G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
16 Sobic.010G238600 transferase family protein, putative, expressed -
17 Sobic.009G036100 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
18 Sobic.003G334600 NAC domain transcription factor, putative, expressed -
19 Sobic.004G189400 expressed protein -
20 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G430400 Sobic003G430400 Sobic002G263400 Sobic002G263400 Sobic003G430400--Sobic002G263400 Sobic002G140400 Sobic002G140400 Sobic003G430400--Sobic002G140400 Sobic001G040200 Sobic001G040200 Sobic003G430400--Sobic001G040200 Sobic006G066200 Sobic006G066200 Sobic003G430400--Sobic006G066200 Sobic002G140300 Sobic002G140300 Sobic003G430400--Sobic002G140300 Sobic007G074000 Sobic007G074000 Sobic003G430400--Sobic007G074000 Sobic003G092900 Sobic003G092900 Sobic003G430400--Sobic003G092900 Sobic002G356101 Sobic002G356101 Sobic003G430400--Sobic002G356101 Sobic004G222500 Sobic004G222500 Sobic003G430400--Sobic004G222500 Sobic002G263400--Sobic002G140400 Sobic004G189400 Sobic004G189400 Sobic002G263400--Sobic004G189400 Sobic003G282901 Sobic003G282901 Sobic002G263400--Sobic003G282901 Sobic004G243100 Sobic004G243100 Sobic002G263400--Sobic004G243100 Sobic001G018300 Sobic001G018300 Sobic002G263400--Sobic001G018300 Sobic001G423800 Sobic001G423800 Sobic002G263400--Sobic001G423800 Sobic002G192000 Sobic002G192000 Sobic002G263400--Sobic002G192000 Sobic001G231400 Sobic001G231400 Sobic002G263400--Sobic001G231400 Sobic003G322900 Sobic003G322900 Sobic002G263400--Sobic003G322900 Sobic001G038900 Sobic001G038900 Sobic002G140400--Sobic001G038900 Sobic002G140400--Sobic002G263400 Sobic002G140400--Sobic004G189400 Sobic002G140400--Sobic001G423800 Sobic008G136400 Sobic008G136400 Sobic002G140400--Sobic008G136400 Sobic002G140400--Sobic007G074000 Sobic004G237800 Sobic004G237800 Sobic002G140400--Sobic004G237800 Sobic008G050600 Sobic008G050600 Sobic002G140400--Sobic008G050600 Sobic003G286600 Sobic003G286600 Sobic002G140400--Sobic003G286600 Sobic001G040200--Sobic002G140300 Sobic002G359300 Sobic002G359300 Sobic001G040200--Sobic002G359300 Sobic003G324400 Sobic003G324400 Sobic001G040200--Sobic003G324400 Sobic001G040200--Sobic003G430400 Sobic001G538866 Sobic001G538866 Sobic001G040200--Sobic001G538866 Sobic009G036100 Sobic009G036100 Sobic001G040200--Sobic009G036100 Sobic003G158500 Sobic003G158500 Sobic001G040200--Sobic003G158500 Sobic006G179500 Sobic006G179500 Sobic001G040200--Sobic006G179500 Sobic002G245800 Sobic002G245800 Sobic001G040200--Sobic002G245800 Sobic006G066200--Sobic003G430400 Sobic006G066200--Sobic002G140300 Sobic006G066200--Sobic004G222500 Sobic009G247900 Sobic009G247900 Sobic006G066200--Sobic009G247900 Sobic004G341800 Sobic004G341800 Sobic006G066200--Sobic004G341800 Sobic006G066200--Sobic001G040200 Sobic006G066200--Sobic003G092900 Sobic002G131800 Sobic002G131800 Sobic006G066200--Sobic002G131800 Sobic006G066200--Sobic006G179500 Sobic002G140300--Sobic006G179500 Sobic002G140300--Sobic001G040200 Sobic006G165100 Sobic006G165100 Sobic002G140300--Sobic006G165100 Sobic002G140300--Sobic004G222500 Sobic002G140300--Sobic001G538866 Sobic002G140300--Sobic009G036100 Sobic006G183400 Sobic006G183400 Sobic002G140300--Sobic006G183400 Sobic002G140300--Sobic003G324400 Sobic002G140300--Sobic009G247900 Sobic003G369100 Sobic003G369100 Sobic007G074000--Sobic003G369100 Sobic004G141200 Sobic004G141200 Sobic007G074000--Sobic004G141200 Sobic007G074000--Sobic004G237800 Sobic007G074000--Sobic002G140400 Sobic003G228900 Sobic003G228900 Sobic007G074000--Sobic003G228900 Sobic002G336600 Sobic002G336600 Sobic007G074000--Sobic002G336600 Sobic003G364600 Sobic003G364600 Sobic007G074000--Sobic003G364600 Sobic001G138600 Sobic001G138600 Sobic007G074000--Sobic001G138600 Sobic007G074000--Sobic009G247900 Sobic003G093000 Sobic003G093000 Sobic003G092900--Sobic003G093000 Sobic003G092900--Sobic004G222500 Sobic002G220000 Sobic002G220000 Sobic003G092900--Sobic002G220000 Sobic001G247300 Sobic001G247300 Sobic003G092900--Sobic001G247300 Sobic003G092900--Sobic002G140300 Sobic003G092900--Sobic003G430400 Sobic003G092900--Sobic009G247900 Sobic001G267600 Sobic001G267600 Sobic003G092900--Sobic001G267600 Sobic002G189100 Sobic002G189100 Sobic003G092900--Sobic002G189100 Sobic010G086200 Sobic010G086200 Sobic002G356101--Sobic010G086200 Sobic002G356101--Sobic007G074000 Sobic004G065500 Sobic004G065500 Sobic002G356101--Sobic004G065500 Sobic002G356101--Sobic001G247300 Sobic002G356101--Sobic009G247900 Sobic002G356101--Sobic003G430400 Sobic009G184000 Sobic009G184000 Sobic002G356101--Sobic009G184000 Sobic005G196800 Sobic005G196800 Sobic002G356101--Sobic005G196800 Sobic009G200700 Sobic009G200700 Sobic002G356101--Sobic009G200700 Sobic004G222500--Sobic002G140300 Sobic004G222500--Sobic003G093000 Sobic004G222500--Sobic003G092900 Sobic003G428700 Sobic003G428700 Sobic004G222500--Sobic003G428700 Sobic004G222500--Sobic006G183400 Sobic004G222500--Sobic009G247900 Sobic001G035100 Sobic001G035100 Sobic004G222500--Sobic001G035100 Sobic004G222500--Sobic002G220000 Sobic004G222500--Sobic006G179500
Octagon: transcription factors


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