Gene annotation
Transcriptome id Sobic.004G222500.1
Synonym ATGA2OX8, GA2OX8
Functional annotation gibberellin 2-beta-dioxygenase 7, putative, expressed
UniProt A0A194YR22
Pfam PF14226 PF03171
Panther DB PTHR10209 PTHR10209:SF177
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology K04125; gibberellin 2beta-dioxygenase
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G21200 : gibberellin 2-oxidase 8
RAP-DB (Rice) LOC_Os02g41954.1 : gibberellin 2-beta-dioxygenase 7, putative, expressed
MaizeGDB (Corn) Zm00025a021077 , Zm00025a044841
Brachypodium KQJ83649 , KQK00433
Barley -
Wheat TraesCS6D02G213100 , TraesCS4B02G376100 , TraesCS6A02G221900 , TraesCS4B02G376200 , TraesCS6B02G259200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.003G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
3 Sobic.003G092900 expressed protein -
4 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.006G183400 OsRhmbd11 - Putative Rhomboid homologue, expressed -
6 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
7 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -
8 Sobic.002G220000 expressed protein -
9 Sobic.006G179500 protein kinase APK1B, chloroplast precursor, putative, expressed -
10 Sobic.009G122400 expressed protein -
11 Sobic.003G430400 OsCML31 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
12 Sobic.004G341800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin family protein, putative, expressed -
13 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
14 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
15 Sobic.006G066200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@prephenate dehydratase domain containing protein, expressed K05359: ADT, arogenate/prephenate dehydratase
16 Sobic.001G267600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
17 Sobic.003G050300 peroxidases (PubMedID : 28944535)@peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
19 Sobic.003G380900 Not investigated(PubMedID : 23766026)@"SERF1(Ortholog in rice:Schmidt et al., 2013)"(PubMedID : 31659872)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
20 Sobic.010G209200 WRKY28, expressed -


Gene co-expression network
sample Sobic004G222500 Sobic004G222500 Sobic002G140300 Sobic002G140300 Sobic004G222500--Sobic002G140300 Sobic003G093000 Sobic003G093000 Sobic004G222500--Sobic003G093000 Sobic003G092900 Sobic003G092900 Sobic004G222500--Sobic003G092900 Sobic003G428700 Sobic003G428700 Sobic004G222500--Sobic003G428700 Sobic006G183400 Sobic006G183400 Sobic004G222500--Sobic006G183400 Sobic009G247900 Sobic009G247900 Sobic004G222500--Sobic009G247900 Sobic001G035100 Sobic001G035100 Sobic004G222500--Sobic001G035100 Sobic002G220000 Sobic002G220000 Sobic004G222500--Sobic002G220000 Sobic006G179500 Sobic006G179500 Sobic004G222500--Sobic006G179500 Sobic002G140300--Sobic006G179500 Sobic001G040200 Sobic001G040200 Sobic002G140300--Sobic001G040200 Sobic006G165100 Sobic006G165100 Sobic002G140300--Sobic006G165100 Sobic002G140300--Sobic004G222500 Sobic001G538866 Sobic001G538866 Sobic002G140300--Sobic001G538866 Sobic009G036100 Sobic009G036100 Sobic002G140300--Sobic009G036100 Sobic002G140300--Sobic006G183400 Sobic003G324400 Sobic003G324400 Sobic002G140300--Sobic003G324400 Sobic002G140300--Sobic009G247900 Sobic003G093000--Sobic002G220000 Sobic003G093000--Sobic003G092900 Sobic002G189100 Sobic002G189100 Sobic003G093000--Sobic002G189100 Sobic003G093000--Sobic004G222500 Sobic003G093000--Sobic003G428700 Sobic004G191400 Sobic004G191400 Sobic003G093000--Sobic004G191400 Sobic003G228900 Sobic003G228900 Sobic003G093000--Sobic003G228900 Sobic009G122400 Sobic009G122400 Sobic003G093000--Sobic009G122400 Sobic010G259300 Sobic010G259300 Sobic003G093000--Sobic010G259300 Sobic003G092900--Sobic003G093000 Sobic003G092900--Sobic004G222500 Sobic003G092900--Sobic002G220000 Sobic001G247300 Sobic001G247300 Sobic003G092900--Sobic001G247300 Sobic003G092900--Sobic002G140300 Sobic003G430400 Sobic003G430400 Sobic003G092900--Sobic003G430400 Sobic003G092900--Sobic009G247900 Sobic001G267600 Sobic001G267600 Sobic003G092900--Sobic001G267600 Sobic003G092900--Sobic002G189100 Sobic003G428700--Sobic009G122400 Sobic010G209200 Sobic010G209200 Sobic003G428700--Sobic010G209200 Sobic003G428700--Sobic004G191400 Sobic004G169200 Sobic004G169200 Sobic003G428700--Sobic004G169200 Sobic003G428700--Sobic003G093000 Sobic003G428700--Sobic004G222500 Sobic003G428700--Sobic009G247900 Sobic003G428700--Sobic002G220000 Sobic003G428700--Sobic001G035100 Sobic006G183400--Sobic006G179500 Sobic006G183400--Sobic002G140300 Sobic005G196800 Sobic005G196800 Sobic006G183400--Sobic005G196800 Sobic006G183400--Sobic001G247300 Sobic006G183400--Sobic004G222500 Sobic003G037800 Sobic003G037800 Sobic006G183400--Sobic003G037800 Sobic006G183400--Sobic009G247900 Sobic002G359300 Sobic002G359300 Sobic006G183400--Sobic002G359300 Sobic003G264500 Sobic003G264500 Sobic006G183400--Sobic003G264500 Sobic007G074000 Sobic007G074000 Sobic009G247900--Sobic007G074000 Sobic003G202200 Sobic003G202200 Sobic009G247900--Sobic003G202200 Sobic001G383700 Sobic001G383700 Sobic009G247900--Sobic001G383700 Sobic009G247900--Sobic003G228900 Sobic009G247900--Sobic003G428700 Sobic009G247900--Sobic010G209200 Sobic009G247900--Sobic009G036100 Sobic009G036000 Sobic009G036000 Sobic009G247900--Sobic009G036000 Sobic004G341800 Sobic004G341800 Sobic009G247900--Sobic004G341800 Sobic001G035100--Sobic002G220000 Sobic001G035100--Sobic003G093000 Sobic001G035100--Sobic003G428700 Sobic004G219800 Sobic004G219800 Sobic001G035100--Sobic004G219800 Sobic001G035100--Sobic004G169200 Sobic004G097100 Sobic004G097100 Sobic001G035100--Sobic004G097100 Sobic001G035100--Sobic004G222500 Sobic009G241801 Sobic009G241801 Sobic001G035100--Sobic009G241801 Sobic001G471200 Sobic001G471200 Sobic001G035100--Sobic001G471200 Sobic002G220000--Sobic003G093000 Sobic002G220000--Sobic001G035100 Sobic001G330400 Sobic001G330400 Sobic002G220000--Sobic001G330400 Sobic002G220000--Sobic003G428700 Sobic002G220000--Sobic003G092900 Sobic002G220000--Sobic009G122400 Sobic002G220000--Sobic004G169200 Sobic002G220000--Sobic002G189100 Sobic002G220000--Sobic004G219800 Sobic006G179500--Sobic002G140300 Sobic006G179500--Sobic002G359300 Sobic006G179500--Sobic006G183400 Sobic006G179500--Sobic001G040200 Sobic006G179500--Sobic004G222500 Sobic003G300800 Sobic003G300800 Sobic006G179500--Sobic003G300800 Sobic006G179500--Sobic003G430400 Sobic006G179500--Sobic006G165100 Sobic006G089300 Sobic006G089300 Sobic006G179500--Sobic006G089300
Octagon: transcription factors


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