Gene annotation
Transcriptome id Sobic.002G220000.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QCT8
Pfam -
Panther DB PTHR34268 PTHR34268:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31945 : -
RAP-DB (Rice) LOC_Os09g27410.1 : expressed protein
MaizeGDB (Corn) Zm00025a014055
Brachypodium -
Barley HORVU5Hr1G066950.1 , HORVU5Hr1G092750.1 , HORVU5Hr1G066950.3 , HORVU5Hr1G066920.2 , HORVU5Hr1G066920.3 , HORVU5Hr1G066920.4
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -
3 Sobic.001G330400 ZOS3-11 - C2H2 zinc finger protein, expressed -
4 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G092900 expressed protein -
6 Sobic.009G122400 expressed protein -
7 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
8 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
9 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.002G358300 expressed protein -
11 Sobic.004G191400 - -
12 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
13 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
14 Sobic.004G222500 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
15 Sobic.010G259300 transferase family protein, putative, expressed -
16 Sobic.010G209200 WRKY28, expressed -
17 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
18 Sobic.001G330200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS3-12 - C2H2 zinc finger protein, expressed -
19 Sobic.003G230100 expressed protein -
20 Sobic.001G481100 DUF581 domain containing protein, expressed -


Gene co-expression network
sample Sobic002G220000 Sobic002G220000 Sobic003G093000 Sobic003G093000 Sobic002G220000--Sobic003G093000 Sobic001G035100 Sobic001G035100 Sobic002G220000--Sobic001G035100 Sobic001G330400 Sobic001G330400 Sobic002G220000--Sobic001G330400 Sobic003G428700 Sobic003G428700 Sobic002G220000--Sobic003G428700 Sobic003G092900 Sobic003G092900 Sobic002G220000--Sobic003G092900 Sobic009G122400 Sobic009G122400 Sobic002G220000--Sobic009G122400 Sobic004G169200 Sobic004G169200 Sobic002G220000--Sobic004G169200 Sobic002G189100 Sobic002G189100 Sobic002G220000--Sobic002G189100 Sobic004G219800 Sobic004G219800 Sobic002G220000--Sobic004G219800 Sobic003G093000--Sobic002G220000 Sobic003G093000--Sobic003G092900 Sobic003G093000--Sobic002G189100 Sobic004G222500 Sobic004G222500 Sobic003G093000--Sobic004G222500 Sobic003G093000--Sobic003G428700 Sobic004G191400 Sobic004G191400 Sobic003G093000--Sobic004G191400 Sobic003G228900 Sobic003G228900 Sobic003G093000--Sobic003G228900 Sobic003G093000--Sobic009G122400 Sobic010G259300 Sobic010G259300 Sobic003G093000--Sobic010G259300 Sobic001G035100--Sobic002G220000 Sobic001G035100--Sobic003G093000 Sobic001G035100--Sobic003G428700 Sobic001G035100--Sobic004G219800 Sobic001G035100--Sobic004G169200 Sobic004G097100 Sobic004G097100 Sobic001G035100--Sobic004G097100 Sobic001G035100--Sobic004G222500 Sobic009G241801 Sobic009G241801 Sobic001G035100--Sobic009G241801 Sobic001G471200 Sobic001G471200 Sobic001G035100--Sobic001G471200 Sobic003G268600 Sobic003G268600 Sobic001G330400--Sobic003G268600 Sobic006G075400 Sobic006G075400 Sobic001G330400--Sobic006G075400 Sobic001G330400--Sobic004G219800 Sobic007G017500 Sobic007G017500 Sobic001G330400--Sobic007G017500 Sobic001G330400--Sobic009G122400 Sobic004G294400 Sobic004G294400 Sobic001G330400--Sobic004G294400 Sobic001G318700 Sobic001G318700 Sobic001G330400--Sobic001G318700 Sobic001G330400--Sobic002G220000 Sobic001G330100 Sobic001G330100 Sobic001G330400--Sobic001G330100 Sobic003G428700--Sobic009G122400 Sobic010G209200 Sobic010G209200 Sobic003G428700--Sobic010G209200 Sobic003G428700--Sobic004G191400 Sobic003G428700--Sobic004G169200 Sobic003G428700--Sobic003G093000 Sobic003G428700--Sobic004G222500 Sobic009G247900 Sobic009G247900 Sobic003G428700--Sobic009G247900 Sobic003G428700--Sobic002G220000 Sobic003G428700--Sobic001G035100 Sobic003G092900--Sobic003G093000 Sobic003G092900--Sobic004G222500 Sobic003G092900--Sobic002G220000 Sobic001G247300 Sobic001G247300 Sobic003G092900--Sobic001G247300 Sobic002G140300 Sobic002G140300 Sobic003G092900--Sobic002G140300 Sobic003G430400 Sobic003G430400 Sobic003G092900--Sobic003G430400 Sobic003G092900--Sobic009G247900 Sobic001G267600 Sobic001G267600 Sobic003G092900--Sobic001G267600 Sobic003G092900--Sobic002G189100 Sobic009G122400--Sobic004G191400 Sobic009G122400--Sobic010G209200 Sobic004G191300 Sobic004G191300 Sobic009G122400--Sobic004G191300 Sobic009G122400--Sobic003G428700 Sobic009G122400--Sobic003G228900 Sobic001G079300 Sobic001G079300 Sobic009G122400--Sobic001G079300 Sobic009G122400--Sobic001G330400 Sobic001G256700 Sobic001G256700 Sobic009G122400--Sobic001G256700 Sobic002G388900 Sobic002G388900 Sobic009G122400--Sobic002G388900 Sobic002G395300 Sobic002G395300 Sobic004G169200--Sobic002G395300 Sobic002G358300 Sobic002G358300 Sobic004G169200--Sobic002G358300 Sobic004G169200--Sobic003G428700 Sobic006G263600 Sobic006G263600 Sobic004G169200--Sobic006G263600 Sobic004G169200--Sobic004G191400 Sobic004G169200--Sobic009G122400 Sobic004G169200--Sobic010G209200 Sobic004G169200--Sobic002G220000 Sobic002G339000 Sobic002G339000 Sobic004G169200--Sobic002G339000 Sobic002G189100--Sobic003G228900 Sobic002G189100--Sobic003G093000 Sobic009G192600 Sobic009G192600 Sobic002G189100--Sobic009G192600 Sobic009G184000 Sobic009G184000 Sobic002G189100--Sobic009G184000 Sobic003G142300 Sobic003G142300 Sobic002G189100--Sobic003G142300 Sobic002G189100--Sobic010G209200 Sobic002G189100--Sobic002G220000 Sobic002G189100--Sobic004G191400 Sobic002G189100--Sobic001G267600 Sobic004G219800--Sobic001G256700 Sobic004G219800--Sobic001G330100 Sobic004G352000 Sobic004G352000 Sobic004G219800--Sobic004G352000 Sobic004G219800--Sobic001G330400 Sobic009G032000 Sobic009G032000 Sobic004G219800--Sobic009G032000 Sobic008G187001 Sobic008G187001 Sobic004G219800--Sobic008G187001 Sobic004G219800--Sobic002G388900 Sobic004G219800--Sobic007G017500 Sobic004G219800--Sobic006G075400
Octagon: transcription factors


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