Gene annotation
Transcriptome id Sobic.002G189100.1
Synonym Sb02g023660
Functional annotation beta-glucan-binding protein 4, putative, expressed
UniProt A0A1B6QC86
Pfam PF03639
Panther DB PTHR31983 PTHR31983:SF0
NCBI CDD -
KEGG Orthology K01180; endo-1,3(4)-beta-glucanase
Gene Ontology GO:0016998; cell wall macromolecule catabolic process


Orthologs (automatic annotation)
TAIR AT5G15870 : glycosyl hydrolase family 81 protein
RAP-DB (Rice) LOC_Os09g21210.1 : beta-glucan-binding protein 4, putative, expressed
MaizeGDB (Corn) Zm00025a046830 , Zm00025a050183
Brachypodium KQJ90094 , KQJ90095 , KQJ90093
Barley -
Wheat TraesCS5D02G205100
Populus -


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cDNA sequences
Sobic.002G189100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
2 Sobic.003G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
3 Sobic.009G192600 Protein tyrosine/DOPA decarboxylase 1 (Os)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
4 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
5 Sobic.003G142300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.010G209200 WRKY28, expressed -
7 Sobic.002G220000 expressed protein -
8 Sobic.004G191400 - -
9 Sobic.001G267600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
10 Sobic.010G259300 transferase family protein, putative, expressed -
11 Sobic.003G362700 cytochrome P450, putative, expressed -
12 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.009G122400 expressed protein -
14 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
15 Sobic.007G169700 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed K01240: uridine nucleosidase
16 Sobic.010G082600 EF hand family protein, putative, expressed -
17 Sobic.003G260300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.008G066401 - -
19 Sobic.001G079300 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.007G122800 expressed protein -


Gene co-expression network
sample Sobic002G189100 Sobic002G189100 Sobic003G228900 Sobic003G228900 Sobic002G189100--Sobic003G228900 Sobic003G093000 Sobic003G093000 Sobic002G189100--Sobic003G093000 Sobic009G192600 Sobic009G192600 Sobic002G189100--Sobic009G192600 Sobic009G184000 Sobic009G184000 Sobic002G189100--Sobic009G184000 Sobic003G142300 Sobic003G142300 Sobic002G189100--Sobic003G142300 Sobic010G209200 Sobic010G209200 Sobic002G189100--Sobic010G209200 Sobic002G220000 Sobic002G220000 Sobic002G189100--Sobic002G220000 Sobic004G191400 Sobic004G191400 Sobic002G189100--Sobic004G191400 Sobic001G267600 Sobic001G267600 Sobic002G189100--Sobic001G267600 Sobic006G075400 Sobic006G075400 Sobic003G228900--Sobic006G075400 Sobic003G228900--Sobic010G209200 Sobic003G228900--Sobic009G184000 Sobic003G228900--Sobic004G191400 Sobic003G432700 Sobic003G432700 Sobic003G228900--Sobic003G432700 Sobic003G260300 Sobic003G260300 Sobic003G228900--Sobic003G260300 Sobic007G017500 Sobic007G017500 Sobic003G228900--Sobic007G017500 Sobic009G122400 Sobic009G122400 Sobic003G228900--Sobic009G122400 Sobic001G079300 Sobic001G079300 Sobic003G228900--Sobic001G079300 Sobic003G093000--Sobic002G220000 Sobic003G092900 Sobic003G092900 Sobic003G093000--Sobic003G092900 Sobic003G093000--Sobic002G189100 Sobic004G222500 Sobic004G222500 Sobic003G093000--Sobic004G222500 Sobic003G428700 Sobic003G428700 Sobic003G093000--Sobic003G428700 Sobic003G093000--Sobic004G191400 Sobic003G093000--Sobic003G228900 Sobic003G093000--Sobic009G122400 Sobic010G259300 Sobic010G259300 Sobic003G093000--Sobic010G259300 Sobic009G192600--Sobic002G189100 Sobic004G064500 Sobic004G064500 Sobic009G192600--Sobic004G064500 Sobic009G192600--Sobic003G142300 Sobic006G101100 Sobic006G101100 Sobic009G192600--Sobic006G101100 Sobic009G192600--Sobic004G191400 Sobic009G192600--Sobic003G428700 Sobic001G259900 Sobic001G259900 Sobic009G192600--Sobic001G259900 Sobic009G192600--Sobic001G267600 Sobic009G192600--Sobic003G093000 Sobic001G112200 Sobic001G112200 Sobic009G184000--Sobic001G112200 Sobic007G169700 Sobic007G169700 Sobic009G184000--Sobic007G169700 Sobic006G235100 Sobic006G235100 Sobic009G184000--Sobic006G235100 Sobic001G502400 Sobic001G502400 Sobic009G184000--Sobic001G502400 Sobic009G184000--Sobic003G228900 Sobic009G184000--Sobic003G432700 Sobic001G138600 Sobic001G138600 Sobic009G184000--Sobic001G138600 Sobic008G066401 Sobic008G066401 Sobic009G184000--Sobic008G066401 Sobic009G184000--Sobic002G189100 Sobic003G142300--Sobic002G189100 Sobic003G142300--Sobic009G192600 Sobic003G362700 Sobic003G362700 Sobic003G142300--Sobic003G362700 Sobic001G259400 Sobic001G259400 Sobic003G142300--Sobic001G259400 Sobic003G142300--Sobic006G101100 Sobic003G142300--Sobic004G064500 Sobic003G313800 Sobic003G313800 Sobic003G142300--Sobic003G313800 Sobic001G259600 Sobic001G259600 Sobic003G142300--Sobic001G259600 Sobic003G142300--Sobic008G066401 Sobic010G209200--Sobic009G122400 Sobic010G209200--Sobic004G191400 Sobic010G209200--Sobic003G428700 Sobic010G209200--Sobic003G228900 Sobic010G209200--Sobic001G079300 Sobic004G191300 Sobic004G191300 Sobic010G209200--Sobic004G191300 Sobic010G209200--Sobic001G138600 Sobic007G213800 Sobic007G213800 Sobic010G209200--Sobic007G213800 Sobic010G209200--Sobic009G184000 Sobic002G220000--Sobic003G093000 Sobic001G035100 Sobic001G035100 Sobic002G220000--Sobic001G035100 Sobic001G330400 Sobic001G330400 Sobic002G220000--Sobic001G330400 Sobic002G220000--Sobic003G428700 Sobic002G220000--Sobic003G092900 Sobic002G220000--Sobic009G122400 Sobic004G169200 Sobic004G169200 Sobic002G220000--Sobic004G169200 Sobic002G220000--Sobic002G189100 Sobic004G219800 Sobic004G219800 Sobic002G220000--Sobic004G219800 Sobic004G191400--Sobic004G191300 Sobic004G191400--Sobic001G079300 Sobic004G191400--Sobic009G122400 Sobic004G191400--Sobic010G209200 Sobic007G122800 Sobic007G122800 Sobic004G191400--Sobic007G122800 Sobic004G191400--Sobic003G228900 Sobic004G308900 Sobic004G308900 Sobic004G191400--Sobic004G308900 Sobic004G191400--Sobic003G428700 Sobic004G294400 Sobic004G294400 Sobic004G191400--Sobic004G294400 Sobic001G267600--Sobic003G093000 Sobic001G267600--Sobic002G189100 Sobic003G064200 Sobic003G064200 Sobic001G267600--Sobic003G064200 Sobic003G268600 Sobic003G268600 Sobic001G267600--Sobic003G268600 Sobic001G247300 Sobic001G247300 Sobic001G267600--Sobic001G247300 Sobic001G267600--Sobic009G192600 Sobic001G267600--Sobic003G092900 Sobic003G050300 Sobic003G050300 Sobic001G267600--Sobic003G050300 Sobic001G267600--Sobic010G259300
Octagon: transcription factors


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