Gene annotation
Transcriptome id Sobic.003G142300.1
Synonym AtMYB78, MYB78, Sb03g012310
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5XI40
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF659
NCBI CDD KOG0048; Transcription factor, Myb superfamily
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G48000 : myb domain protein 112
RAP-DB (Rice) LOC_Os01g19330.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a036037 , Zm00025a024262 , Zm00025a015471 , Zm00025a052506 , Zm00025a002214
Brachypodium KQK04064 , KQK07949
Barley HORVU2Hr1G027600.3 , HORVU2Hr1G027600.2 , HORVU2Hr1G027600.4 , HORVU4Hr1G028780.3 , HORVU4Hr1G028780.1 , HORVU4Hr1G028780.7 , HORVU4Hr1G028780.6 , HORVU4Hr1G028780.5 , HORVU4Hr1G028780.4 , HORVU4Hr1G028780.8 , HORVU1Hr1G016420.1 , HORVU1Hr1G079040.6 , HORVU1Hr1G079040.5 , HORVU1Hr1G079040.4 , HORVU1Hr1G079040.3 , HORVU1Hr1G079040.2 , HORVU1Hr1G079040.1
Wheat TraesCS1D02G078600 , TraesCS2D02G158200 , TraesCS1D02G371800 , TraesCS1A02G076200 , TraesCS1A02G366200 , TraesCSU02G069000 , TraesCS4D02G142900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
2 Sobic.009G192600 Protein tyrosine/DOPA decarboxylase 1 (Os)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
3 Sobic.003G362700 cytochrome P450, putative, expressed -
4 Sobic.001G259400 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
5 Sobic.006G101100 expressed protein -
6 Sobic.004G064500 class I glutamine amidotransferase, putative, expressed -
7 Sobic.003G313800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
8 Sobic.001G259600 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
9 Sobic.008G066401 - -
10 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
11 Sobic.010G209200 WRKY28, expressed -
12 Sobic.007G122800 expressed protein -
13 Sobic.006G007900 SbOMT3 is involved in the biosynthesis of the allelochemical sorgoleone. Highly expressed in rrot hairs.(PubMedID : 17998204)@"Catalyse the A ringspecific 3,5-bis-O-methylation of resveratrol, yielding pterostilbene, preference for alkylresorcinolic-type substrates"(PubMedID : 21902799)@Produced pinostilbene as the major product besides a very small amount of pterostilbene from resveratrol in E.coli.(PubMedID : 24267561)@"Methylation activity in the A ring hydroxyl group against resveratrol as well as 3,5-dihydroxy-4'-methoxystilbene"(PubMedID : 25033820)@Catalytic activity for transferring one methyl group to the hydroxyl group at the 3- or 5-position in resveratrol in E.coli. Weak activity for methylation of both hydroxyl groups to generate pterostilbene in E.coli.(PubMedID : 25715927)@O-methyltransferase, putative, expressed -
14 Sobic.002G282300 expressed protein -
15 Sobic.003G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
16 Sobic.002G012500 DUF538 domain containing protein, putative, expressed -
17 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.004G004400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00016: LDH, L-lactate dehydrogenase
19 Sobic.002G358300 expressed protein -
20 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -


Gene co-expression network
sample Sobic003G142300 Sobic003G142300 Sobic002G189100 Sobic002G189100 Sobic003G142300--Sobic002G189100 Sobic009G192600 Sobic009G192600 Sobic003G142300--Sobic009G192600 Sobic003G362700 Sobic003G362700 Sobic003G142300--Sobic003G362700 Sobic001G259400 Sobic001G259400 Sobic003G142300--Sobic001G259400 Sobic006G101100 Sobic006G101100 Sobic003G142300--Sobic006G101100 Sobic004G064500 Sobic004G064500 Sobic003G142300--Sobic004G064500 Sobic003G313800 Sobic003G313800 Sobic003G142300--Sobic003G313800 Sobic001G259600 Sobic001G259600 Sobic003G142300--Sobic001G259600 Sobic008G066401 Sobic008G066401 Sobic003G142300--Sobic008G066401 Sobic003G228900 Sobic003G228900 Sobic002G189100--Sobic003G228900 Sobic003G093000 Sobic003G093000 Sobic002G189100--Sobic003G093000 Sobic002G189100--Sobic009G192600 Sobic009G184000 Sobic009G184000 Sobic002G189100--Sobic009G184000 Sobic002G189100--Sobic003G142300 Sobic010G209200 Sobic010G209200 Sobic002G189100--Sobic010G209200 Sobic002G220000 Sobic002G220000 Sobic002G189100--Sobic002G220000 Sobic004G191400 Sobic004G191400 Sobic002G189100--Sobic004G191400 Sobic001G267600 Sobic001G267600 Sobic002G189100--Sobic001G267600 Sobic009G192600--Sobic002G189100 Sobic009G192600--Sobic004G064500 Sobic009G192600--Sobic003G142300 Sobic009G192600--Sobic006G101100 Sobic009G192600--Sobic004G191400 Sobic003G428700 Sobic003G428700 Sobic009G192600--Sobic003G428700 Sobic001G259900 Sobic001G259900 Sobic009G192600--Sobic001G259900 Sobic009G192600--Sobic001G267600 Sobic009G192600--Sobic003G093000 Sobic003G362700--Sobic008G066401 Sobic003G362700--Sobic009G184000 Sobic003G362700--Sobic002G189100 Sobic001G112200 Sobic001G112200 Sobic003G362700--Sobic001G112200 Sobic003G362700--Sobic010G209200 Sobic007G169700 Sobic007G169700 Sobic003G362700--Sobic007G169700 Sobic001G138600 Sobic001G138600 Sobic003G362700--Sobic001G138600 Sobic009G145700 Sobic009G145700 Sobic003G362700--Sobic009G145700 Sobic003G362700--Sobic003G142300 Sobic002G012500 Sobic002G012500 Sobic001G259400--Sobic002G012500 Sobic006G007900 Sobic006G007900 Sobic001G259400--Sobic006G007900 Sobic001G259400--Sobic008G066401 Sobic005G086600 Sobic005G086600 Sobic001G259400--Sobic005G086600 Sobic001G259400--Sobic004G064500 Sobic003G079200 Sobic003G079200 Sobic001G259400--Sobic003G079200 Sobic008G066200 Sobic008G066200 Sobic001G259400--Sobic008G066200 Sobic006G008000 Sobic006G008000 Sobic001G259400--Sobic006G008000 Sobic008G158600 Sobic008G158600 Sobic001G259400--Sobic008G158600 Sobic006G101100--Sobic009G192600 Sobic006G101300 Sobic006G101300 Sobic006G101100--Sobic006G101300 Sobic006G101100--Sobic008G066200 Sobic006G101100--Sobic001G259900 Sobic003G313100 Sobic003G313100 Sobic006G101100--Sobic003G313100 Sobic010G082600 Sobic010G082600 Sobic006G101100--Sobic010G082600 Sobic006G101100--Sobic002G012500 Sobic006G101100--Sobic001G259400 Sobic006G101100--Sobic003G142300 Sobic004G064500--Sobic009G192600 Sobic004G064500--Sobic001G259400 Sobic007G122800 Sobic007G122800 Sobic004G064500--Sobic007G122800 Sobic004G064500--Sobic005G086600 Sobic003G268600 Sobic003G268600 Sobic004G064500--Sobic003G268600 Sobic004G064500--Sobic002G189100 Sobic003G269000 Sobic003G269000 Sobic004G064500--Sobic003G269000 Sobic004G064500--Sobic001G267600 Sobic004G064500--Sobic006G007900 Sobic003G313800--Sobic001G259600 Sobic009G179500 Sobic009G179500 Sobic003G313800--Sobic009G179500 Sobic007G213800 Sobic007G213800 Sobic003G313800--Sobic007G213800 Sobic002G282300 Sobic002G282300 Sobic003G313800--Sobic002G282300 Sobic003G324400 Sobic003G324400 Sobic003G313800--Sobic003G324400 Sobic002G036100 Sobic002G036100 Sobic003G313800--Sobic002G036100 Sobic001G077400 Sobic001G077400 Sobic003G313800--Sobic001G077400 Sobic006G165100 Sobic006G165100 Sobic003G313800--Sobic006G165100 Sobic005G037000 Sobic005G037000 Sobic003G313800--Sobic005G037000 Sobic001G259700 Sobic001G259700 Sobic001G259600--Sobic001G259700 Sobic001G259600--Sobic003G313800 Sobic010G209100 Sobic010G209100 Sobic001G259600--Sobic010G209100 Sobic001G259600--Sobic002G282300 Sobic006G263600 Sobic006G263600 Sobic001G259600--Sobic006G263600 Sobic001G259600--Sobic007G213800 Sobic001G259600--Sobic003G324400 Sobic004G169200 Sobic004G169200 Sobic001G259600--Sobic004G169200 Sobic001G259600--Sobic005G037000 Sobic008G066401--Sobic009G145700 Sobic009G145600 Sobic009G145600 Sobic008G066401--Sobic009G145600 Sobic008G066401--Sobic008G066200 Sobic008G066401--Sobic002G012500 Sobic008G066401--Sobic007G169700 Sobic008G066401--Sobic009G184000 Sobic008G066401--Sobic006G008000 Sobic003G043500 Sobic003G043500 Sobic008G066401--Sobic003G043500 Sobic008G066401--Sobic003G362700
Octagon: transcription factors


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