Gene annotation
Transcriptome id Sobic.003G313800.1,Sobic.003G313800.2
Synonym ATCKX6, Sb03g036160, ATCKX5, CKX5
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cytokinin dehydrogenase precursor, putative, expressed
UniProt C5XLL8 , A0A1W0VZW0
Pfam PF01565 PF09265
Panther DB PTHR13878 PTHR13878:SF44
NCBI CDD KOG1231; Proteins containing the FAD binding domain
KEGG Orthology K00279; cytokinin dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0009690cytokinin metabolic process


Orthologs (automatic annotation)
TAIR AT1G75450 : cytokinin oxidase 5
RAP-DB (Rice) LOC_Os01g56810.1 : cytokinin dehydrogenase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a039908 , Zm00025a027334
Brachypodium KQK10018 , PNT66185 , PNT72961 , KQK03096
Barley HORVU3Hr1G075920.6 , HORVU3Hr1G075920.4 , HORVU3Hr1G075920.5 , HORVU3Hr1G075920.2 , HORVU3Hr1G075920.3 , HORVU3Hr1G075920.1
Wheat TraesCS3B02G344600 , TraesCS3A02G321100 , TraesCS3D02G310200 , TraesCS3D02G111300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G259600 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
2 Sobic.009G179500 expressed protein -
3 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
4 Sobic.002G282300 expressed protein -
5 Sobic.003G324400 Not investigated(PubMedID : 23766026)@Contribute to rice salt tolerance under a salt inducible abscisic acid 2 (ABA2) promoter(PubMedID : 28393269)@AP2 domain containing protein, expressed -
6 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
7 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
8 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
9 Sobic.005G037000 cytochrome P450, putative, expressed -
10 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
11 Sobic.009G036100 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
12 Sobic.002G356101 - -
13 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
14 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
15 Sobic.001G391500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.006G263600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.003G142300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.010G209200 WRKY28, expressed -
19 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase


Gene co-expression network
sample Sobic003G313800 Sobic003G313800 Sobic001G259600 Sobic001G259600 Sobic003G313800--Sobic001G259600 Sobic009G179500 Sobic009G179500 Sobic003G313800--Sobic009G179500 Sobic007G213800 Sobic007G213800 Sobic003G313800--Sobic007G213800 Sobic002G282300 Sobic002G282300 Sobic003G313800--Sobic002G282300 Sobic003G324400 Sobic003G324400 Sobic003G313800--Sobic003G324400 Sobic002G036100 Sobic002G036100 Sobic003G313800--Sobic002G036100 Sobic001G077400 Sobic001G077400 Sobic003G313800--Sobic001G077400 Sobic006G165100 Sobic006G165100 Sobic003G313800--Sobic006G165100 Sobic005G037000 Sobic005G037000 Sobic003G313800--Sobic005G037000 Sobic001G259700 Sobic001G259700 Sobic001G259600--Sobic001G259700 Sobic001G259600--Sobic003G313800 Sobic010G209100 Sobic010G209100 Sobic001G259600--Sobic010G209100 Sobic001G259600--Sobic002G282300 Sobic006G263600 Sobic006G263600 Sobic001G259600--Sobic006G263600 Sobic001G259600--Sobic007G213800 Sobic001G259600--Sobic003G324400 Sobic004G169200 Sobic004G169200 Sobic001G259600--Sobic004G169200 Sobic001G259600--Sobic005G037000 Sobic009G179500--Sobic003G313800 Sobic004G306300 Sobic004G306300 Sobic009G179500--Sobic004G306300 Sobic001G138600 Sobic001G138600 Sobic009G179500--Sobic001G138600 Sobic009G179500--Sobic007G213800 Sobic006G190100 Sobic006G190100 Sobic009G179500--Sobic006G190100 Sobic001G459800 Sobic001G459800 Sobic009G179500--Sobic001G459800 Sobic003G148600 Sobic003G148600 Sobic009G179500--Sobic003G148600 Sobic004G065500 Sobic004G065500 Sobic009G179500--Sobic004G065500 Sobic009G183300 Sobic009G183300 Sobic009G179500--Sobic009G183300 Sobic003G144700 Sobic003G144700 Sobic007G213800--Sobic003G144700 Sobic001G391500 Sobic001G391500 Sobic007G213800--Sobic001G391500 Sobic007G213800--Sobic002G282300 Sobic006G230900 Sobic006G230900 Sobic007G213800--Sobic006G230900 Sobic003G197200 Sobic003G197200 Sobic007G213800--Sobic003G197200 Sobic007G213800--Sobic001G138600 Sobic006G231200 Sobic006G231200 Sobic007G213800--Sobic006G231200 Sobic010G209200 Sobic010G209200 Sobic007G213800--Sobic010G209200 Sobic007G213800--Sobic001G459800 Sobic002G282300--Sobic006G230900 Sobic002G282300--Sobic007G213800 Sobic001G205350 Sobic001G205350 Sobic002G282300--Sobic001G205350 Sobic001G338600 Sobic001G338600 Sobic002G282300--Sobic001G338600 Sobic002G282300--Sobic003G144700 Sobic002G282300--Sobic003G197200 Sobic002G282300--Sobic006G231200 Sobic001G320900 Sobic001G320900 Sobic002G282300--Sobic001G320900 Sobic002G282300--Sobic004G169200 Sobic003G324400--Sobic006G165100 Sobic001G040200 Sobic001G040200 Sobic003G324400--Sobic001G040200 Sobic002G140300 Sobic002G140300 Sobic003G324400--Sobic002G140300 Sobic009G036100 Sobic009G036100 Sobic003G324400--Sobic009G036100 Sobic003G324400--Sobic006G263600 Sobic009G247900 Sobic009G247900 Sobic003G324400--Sobic009G247900 Sobic002G405600 Sobic002G405600 Sobic003G324400--Sobic002G405600 Sobic003G324400--Sobic003G313800 Sobic003G324400--Sobic002G282300 Sobic002G036100--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic002G036100--Sobic004G280900 Sobic001G538866 Sobic001G538866 Sobic002G036100--Sobic001G538866 Sobic002G036100--Sobic006G165100 Sobic002G036100--Sobic002G140300 Sobic002G036100--Sobic001G259600 Sobic002G036100--Sobic003G313800 Sobic002G036150 Sobic002G036150 Sobic002G036100--Sobic002G036150 Sobic002G036100--Sobic001G040200 Sobic001G077400--Sobic004G280900 Sobic001G077400--Sobic005G037000 Sobic001G209800 Sobic001G209800 Sobic001G077400--Sobic001G209800 Sobic001G441100 Sobic001G441100 Sobic001G077400--Sobic001G441100 Sobic009G217600 Sobic009G217600 Sobic001G077400--Sobic009G217600 Sobic001G035000 Sobic001G035000 Sobic001G077400--Sobic001G035000 Sobic001G077400--Sobic002G036100 Sobic001G077400--Sobic006G165100 Sobic001G341600 Sobic001G341600 Sobic001G077400--Sobic001G341600 Sobic006G165100--Sobic002G140300 Sobic006G165100--Sobic003G324400 Sobic006G165100--Sobic001G077400 Sobic001G052300 Sobic001G052300 Sobic006G165100--Sobic001G052300 Sobic006G165100--Sobic002G036100 Sobic006G165100--Sobic009G036100 Sobic009G255500 Sobic009G255500 Sobic006G165100--Sobic009G255500 Sobic006G165100--Sobic004G280900 Sobic009G200700 Sobic009G200700 Sobic006G165100--Sobic009G200700 Sobic005G037000--Sobic001G077400 Sobic005G037000--Sobic004G280900 Sobic005G037000--Sobic001G441100 Sobic005G037000--Sobic001G035000 Sobic005G037000--Sobic001G209800 Sobic005G037000--Sobic009G217600 Sobic007G126300 Sobic007G126300 Sobic005G037000--Sobic007G126300 Sobic005G037000--Sobic001G259600 Sobic005G037000--Sobic006G165100
Octagon: transcription factors


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