Gene annotation
Transcriptome id Sobic.006G231100.1
Synonym Sb06g029880
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
wound induced protein, putative, expressed
UniProt C5YGQ4
Pfam PF12609
Panther DB PTHR33090
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G10270 : Wound-responsive family protein
RAP-DB (Rice) LOC_Os04g54240.1 : wound induced protein, putative, expressed
MaizeGDB (Corn) Zm00025a018162 , Zm00025a009631 , Zm00025a009630
Brachypodium KQK17212 , KQJ84834 , KQJ84833 , KQJ93436 , KQJ84831 , KQJ84830
Barley HORVU2Hr1G108780.1 , HORVU7Hr1G101580.2 , HORVU2Hr1G116830.1 , HORVU2Hr1G108730.1 , HORVU6Hr1G025830.1 , HORVU2Hr1G116800.1 , HORVU2Hr1G116780.1 , HORVU2Hr1G116800.3 , HORVU2Hr1G116800.4 , HORVU7Hr1G101580.1
Wheat TraesCS7B02G348300 , TraesCS7A02G449200 , TraesCS7B02G348900 , TraesCS2D02G532000
Populus -


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cDNA sequences
Sobic.006G231100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
2 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
3 Sobic.006G231200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
4 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
6 Sobic.010G234600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
7 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
8 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
9 Sobic.002G282300 expressed protein -
10 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
11 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.003G324400 Not investigated(PubMedID : 23766026)@Contribute to rice salt tolerance under a salt inducible abscisic acid 2 (ABA2) promoter(PubMedID : 28393269)@AP2 domain containing protein, expressed -
13 Sobic.009G183300 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
14 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
15 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
16 Sobic.006G231332 - -
17 Sobic.006G267200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
18 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
19 Sobic.002G356101 - -
20 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase


Gene co-expression network
sample Sobic006G231100 Sobic006G231100 Sobic008G177800 Sobic008G177800 Sobic006G231100--Sobic008G177800 Sobic006G230900 Sobic006G230900 Sobic006G231100--Sobic006G230900 Sobic006G231200 Sobic006G231200 Sobic006G231100--Sobic006G231200 Sobic010G217800 Sobic010G217800 Sobic006G231100--Sobic010G217800 Sobic002G415600 Sobic002G415600 Sobic006G231100--Sobic002G415600 Sobic010G234600 Sobic010G234600 Sobic006G231100--Sobic010G234600 Sobic004G286600 Sobic004G286600 Sobic006G231100--Sobic004G286600 Sobic002G294700 Sobic002G294700 Sobic006G231100--Sobic002G294700 Sobic002G282300 Sobic002G282300 Sobic006G231100--Sobic002G282300 Sobic008G177800--Sobic002G294700 Sobic008G177800--Sobic006G231100 Sobic008G177800--Sobic010G234600 Sobic008G177800--Sobic004G286600 Sobic008G177800--Sobic002G415600 Sobic008G177800--Sobic010G217800 Sobic009G255500 Sobic009G255500 Sobic008G177800--Sobic009G255500 Sobic008G177800--Sobic006G230900 Sobic001G077700 Sobic001G077700 Sobic008G177800--Sobic001G077700 Sobic006G230900--Sobic006G231200 Sobic006G230900--Sobic006G231100 Sobic006G230900--Sobic002G282300 Sobic007G213800 Sobic007G213800 Sobic006G230900--Sobic007G213800 Sobic006G230900--Sobic010G217800 Sobic006G230900--Sobic002G415600 Sobic003G144700 Sobic003G144700 Sobic006G230900--Sobic003G144700 Sobic003G123600 Sobic003G123600 Sobic006G230900--Sobic003G123600 Sobic003G197200 Sobic003G197200 Sobic006G230900--Sobic003G197200 Sobic006G231200--Sobic006G230900 Sobic006G231200--Sobic006G231100 Sobic006G231200--Sobic007G213800 Sobic001G459800 Sobic001G459800 Sobic006G231200--Sobic001G459800 Sobic006G231200--Sobic010G217800 Sobic006G231200--Sobic003G144700 Sobic006G267200 Sobic006G267200 Sobic006G231200--Sobic006G267200 Sobic006G231200--Sobic002G282300 Sobic001G320900 Sobic001G320900 Sobic006G231200--Sobic001G320900 Sobic010G217800--Sobic002G415600 Sobic010G217800--Sobic006G230900 Sobic010G217800--Sobic003G144700 Sobic010G217800--Sobic003G123600 Sobic010G217800--Sobic006G231200 Sobic010G217800--Sobic006G231100 Sobic010G217800--Sobic006G267200 Sobic010G220200 Sobic010G220200 Sobic010G217800--Sobic010G220200 Sobic010G217800--Sobic008G177800 Sobic002G415600--Sobic010G217800 Sobic002G415600--Sobic003G123600 Sobic002G415600--Sobic006G230900 Sobic002G415600--Sobic003G144700 Sobic010G234700 Sobic010G234700 Sobic002G415600--Sobic010G234700 Sobic006G190500 Sobic006G190500 Sobic002G415600--Sobic006G190500 Sobic002G415600--Sobic006G231100 Sobic002G415600--Sobic008G177800 Sobic002G415600--Sobic010G234600 Sobic010G234600--Sobic010G234700 Sobic010G234600--Sobic008G177800 Sobic010G234600--Sobic001G077700 Sobic010G234600--Sobic006G231100 Sobic010G234600--Sobic002G294700 Sobic010G234600--Sobic002G415600 Sobic006G231332 Sobic006G231332 Sobic010G234600--Sobic006G231332 Sobic009G071800 Sobic009G071800 Sobic010G234600--Sobic009G071800 Sobic002G248100 Sobic002G248100 Sobic010G234600--Sobic002G248100 Sobic004G286600--Sobic008G177800 Sobic004G286600--Sobic006G231100 Sobic004G286600--Sobic002G294700 Sobic004G286600--Sobic001G077700 Sobic004G286600--Sobic010G234600 Sobic002G036100 Sobic002G036100 Sobic004G286600--Sobic002G036100 Sobic004G286600--Sobic002G248100 Sobic006G179500 Sobic006G179500 Sobic004G286600--Sobic006G179500 Sobic002G140300 Sobic002G140300 Sobic004G286600--Sobic002G140300 Sobic002G294700--Sobic008G177800 Sobic002G294700--Sobic010G234600 Sobic002G294700--Sobic006G231100 Sobic002G374100 Sobic002G374100 Sobic002G294700--Sobic002G374100 Sobic002G294700--Sobic004G286600 Sobic002G294700--Sobic001G077700 Sobic010G246000 Sobic010G246000 Sobic002G294700--Sobic010G246000 Sobic004G036600 Sobic004G036600 Sobic002G294700--Sobic004G036600 Sobic002G278500 Sobic002G278500 Sobic002G294700--Sobic002G278500 Sobic002G282300--Sobic006G230900 Sobic002G282300--Sobic007G213800 Sobic001G205350 Sobic001G205350 Sobic002G282300--Sobic001G205350 Sobic001G338600 Sobic001G338600 Sobic002G282300--Sobic001G338600 Sobic002G282300--Sobic003G144700 Sobic002G282300--Sobic003G197200 Sobic002G282300--Sobic006G231200 Sobic002G282300--Sobic001G320900 Sobic004G169200 Sobic004G169200 Sobic002G282300--Sobic004G169200
Octagon: transcription factors


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