Gene annotation
Transcriptome id Sobic.006G231332.1
Synonym -
Functional annotation -
UniProt A0A1Z5RFD4
Pfam PF12609
Panther DB PTHR33090
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G10265 : Wound-responsive family protein
RAP-DB (Rice) LOC_Os04g54240.1 : wound induced protein, putative, expressed
MaizeGDB (Corn) Zm00025a018162 , Zm00025a009631 , Zm00025a009630
Brachypodium KQK17212 , KQJ84834 , KQJ84832 , KQJ84831 , KQJ93436 , KQJ84830
Barley HORVU2Hr1G116830.1 , HORVU2Hr1G116780.1 , HORVU7Hr1G101580.1 , HORVU7Hr1G101580.2 , HORVU2Hr1G116800.1 , HORVU2Hr1G116800.2 , HORVU2Hr1G116800.3 , HORVU2Hr1G116800.4 , HORVU6Hr1G025830.1
Wheat TraesCS7B02G348300 , TraesCS7A02G449200 , TraesCS2D02G533400 , TraesCS7B02G348900 , TraesCS2D02G532000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G234600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
2 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
3 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
4 Sobic.006G231200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
5 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
6 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.009G111200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
8 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
9 Sobic.001G424200 protein kinase, putative, expressed -
10 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
11 Sobic.009G169000 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K01568: PDC, pyruvate decarboxylase
12 Sobic.001G481600 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.003G387000 expressed protein -
14 Sobic.008G074900 - -
15 Sobic.010G234700 expressed protein -
16 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
17 Sobic.002G248100 expressed protein -
18 Sobic.009G183300 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
19 Sobic.001G320900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
20 Sobic.001G338600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G231332 Sobic006G231332 Sobic010G234600 Sobic010G234600 Sobic006G231332--Sobic010G234600 Sobic002G415600 Sobic002G415600 Sobic006G231332--Sobic002G415600 Sobic006G231100 Sobic006G231100 Sobic006G231332--Sobic006G231100 Sobic006G231200 Sobic006G231200 Sobic006G231332--Sobic006G231200 Sobic008G177800 Sobic008G177800 Sobic006G231332--Sobic008G177800 Sobic010G217800 Sobic010G217800 Sobic006G231332--Sobic010G217800 Sobic009G111200 Sobic009G111200 Sobic006G231332--Sobic009G111200 Sobic006G230900 Sobic006G230900 Sobic006G231332--Sobic006G230900 Sobic001G424200 Sobic001G424200 Sobic006G231332--Sobic001G424200 Sobic010G234700 Sobic010G234700 Sobic010G234600--Sobic010G234700 Sobic010G234600--Sobic008G177800 Sobic001G077700 Sobic001G077700 Sobic010G234600--Sobic001G077700 Sobic010G234600--Sobic006G231100 Sobic002G294700 Sobic002G294700 Sobic010G234600--Sobic002G294700 Sobic010G234600--Sobic002G415600 Sobic010G234600--Sobic006G231332 Sobic009G071800 Sobic009G071800 Sobic010G234600--Sobic009G071800 Sobic002G248100 Sobic002G248100 Sobic010G234600--Sobic002G248100 Sobic002G415600--Sobic010G217800 Sobic003G123600 Sobic003G123600 Sobic002G415600--Sobic003G123600 Sobic002G415600--Sobic006G230900 Sobic003G144700 Sobic003G144700 Sobic002G415600--Sobic003G144700 Sobic002G415600--Sobic010G234700 Sobic006G190500 Sobic006G190500 Sobic002G415600--Sobic006G190500 Sobic002G415600--Sobic006G231100 Sobic002G415600--Sobic008G177800 Sobic002G415600--Sobic010G234600 Sobic006G231100--Sobic008G177800 Sobic006G231100--Sobic006G230900 Sobic006G231100--Sobic006G231200 Sobic006G231100--Sobic010G217800 Sobic006G231100--Sobic002G415600 Sobic006G231100--Sobic010G234600 Sobic004G286600 Sobic004G286600 Sobic006G231100--Sobic004G286600 Sobic006G231100--Sobic002G294700 Sobic002G282300 Sobic002G282300 Sobic006G231100--Sobic002G282300 Sobic006G231200--Sobic006G230900 Sobic006G231200--Sobic006G231100 Sobic007G213800 Sobic007G213800 Sobic006G231200--Sobic007G213800 Sobic001G459800 Sobic001G459800 Sobic006G231200--Sobic001G459800 Sobic006G231200--Sobic010G217800 Sobic006G231200--Sobic003G144700 Sobic006G267200 Sobic006G267200 Sobic006G231200--Sobic006G267200 Sobic006G231200--Sobic002G282300 Sobic001G320900 Sobic001G320900 Sobic006G231200--Sobic001G320900 Sobic008G177800--Sobic002G294700 Sobic008G177800--Sobic006G231100 Sobic008G177800--Sobic010G234600 Sobic008G177800--Sobic004G286600 Sobic008G177800--Sobic002G415600 Sobic008G177800--Sobic010G217800 Sobic009G255500 Sobic009G255500 Sobic008G177800--Sobic009G255500 Sobic008G177800--Sobic006G230900 Sobic008G177800--Sobic001G077700 Sobic010G217800--Sobic002G415600 Sobic010G217800--Sobic006G230900 Sobic010G217800--Sobic003G144700 Sobic010G217800--Sobic003G123600 Sobic010G217800--Sobic006G231200 Sobic010G217800--Sobic006G231100 Sobic010G217800--Sobic006G267200 Sobic010G220200 Sobic010G220200 Sobic010G217800--Sobic010G220200 Sobic010G217800--Sobic008G177800 Sobic009G111200--Sobic006G190500 Sobic009G111200--Sobic002G415600 Sobic006G230800 Sobic006G230800 Sobic009G111200--Sobic006G230800 Sobic001G481600 Sobic001G481600 Sobic009G111200--Sobic001G481600 Sobic009G111200--Sobic003G123600 Sobic005G010200 Sobic005G010200 Sobic009G111200--Sobic005G010200 Sobic009G111200--Sobic006G231200 Sobic005G103500 Sobic005G103500 Sobic009G111200--Sobic005G103500 Sobic009G111200--Sobic010G217800 Sobic006G230900--Sobic006G231200 Sobic006G230900--Sobic006G231100 Sobic006G230900--Sobic002G282300 Sobic006G230900--Sobic007G213800 Sobic006G230900--Sobic010G217800 Sobic006G230900--Sobic002G415600 Sobic006G230900--Sobic003G144700 Sobic006G230900--Sobic003G123600 Sobic003G197200 Sobic003G197200 Sobic006G230900--Sobic003G197200 Sobic003G094200 Sobic003G094200 Sobic001G424200--Sobic003G094200 Sobic001G424200--Sobic006G231332 Sobic003G300800 Sobic003G300800 Sobic001G424200--Sobic003G300800 Sobic010G178500 Sobic010G178500 Sobic001G424200--Sobic010G178500 Sobic001G424200--Sobic002G294700 Sobic004G249900 Sobic004G249900 Sobic001G424200--Sobic004G249900 Sobic004G048100 Sobic004G048100 Sobic001G424200--Sobic004G048100 Sobic001G424200--Sobic008G177800 Sobic004G036600 Sobic004G036600 Sobic001G424200--Sobic004G036600
Octagon: transcription factors


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