Gene annotation
Transcriptome id Sobic.003G144700.1,Sobic.003G144700.2
Synonym Sb03g012520
Functional annotation universal stress protein domain containing protein, putative, expressed
UniProt C5XI67 , A0A1W0VXB9
Pfam PF00582
Panther DB PTHR31964 PTHR31964:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR AT3G62550 : Adenine nucleotide alpha hydrolases-like superfamily protein
RAP-DB (Rice) LOC_Os01g19820.3,LOC_Os01g19820.4 : universal stress protein domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a036105
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G197200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
2 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
3 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
4 Sobic.001G320900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
5 Sobic.003G355100 expressed protein -
6 Sobic.001G391500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.009G169000 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K01568: PDC, pyruvate decarboxylase
8 Sobic.003G123600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
10 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
11 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase
12 Sobic.007G214600 EF hand family protein, putative, expressed -
13 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
15 Sobic.002G282300 expressed protein -
16 Sobic.006G267200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
17 Sobic.001G107800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.004G280200 tobamovirus multiplication protein, putative, expressed -
19 Sobic.006G231200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
20 Sobic.007G026600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -


Gene co-expression network
sample Sobic003G144700 Sobic003G144700 Sobic003G197200 Sobic003G197200 Sobic003G144700--Sobic003G197200 Sobic003G148600 Sobic003G148600 Sobic003G144700--Sobic003G148600 Sobic007G213800 Sobic007G213800 Sobic003G144700--Sobic007G213800 Sobic001G320900 Sobic001G320900 Sobic003G144700--Sobic001G320900 Sobic003G355100 Sobic003G355100 Sobic003G144700--Sobic003G355100 Sobic001G391500 Sobic001G391500 Sobic003G144700--Sobic001G391500 Sobic009G169000 Sobic009G169000 Sobic003G144700--Sobic009G169000 Sobic003G123600 Sobic003G123600 Sobic003G144700--Sobic003G123600 Sobic006G230900 Sobic006G230900 Sobic003G144700--Sobic006G230900 Sobic003G197200--Sobic003G148600 Sobic007G214600 Sobic007G214600 Sobic003G197200--Sobic007G214600 Sobic003G197200--Sobic003G355100 Sobic003G197200--Sobic003G144700 Sobic001G443800 Sobic001G443800 Sobic003G197200--Sobic001G443800 Sobic001G481300 Sobic001G481300 Sobic003G197200--Sobic001G481300 Sobic001G201200 Sobic001G201200 Sobic003G197200--Sobic001G201200 Sobic004G109600 Sobic004G109600 Sobic003G197200--Sobic004G109600 Sobic003G197200--Sobic003G123600 Sobic003G148600--Sobic003G197200 Sobic003G148600--Sobic003G123600 Sobic003G148600--Sobic003G144700 Sobic003G148600--Sobic003G355100 Sobic003G148600--Sobic007G214600 Sobic004G166200 Sobic004G166200 Sobic003G148600--Sobic004G166200 Sobic001G107800 Sobic001G107800 Sobic003G148600--Sobic001G107800 Sobic001G405500 Sobic001G405500 Sobic003G148600--Sobic001G405500 Sobic003G394400 Sobic003G394400 Sobic003G148600--Sobic003G394400 Sobic007G213800--Sobic003G144700 Sobic007G213800--Sobic001G391500 Sobic002G282300 Sobic002G282300 Sobic007G213800--Sobic002G282300 Sobic007G213800--Sobic006G230900 Sobic007G213800--Sobic003G197200 Sobic001G138600 Sobic001G138600 Sobic007G213800--Sobic001G138600 Sobic006G231200 Sobic006G231200 Sobic007G213800--Sobic006G231200 Sobic010G209200 Sobic010G209200 Sobic007G213800--Sobic010G209200 Sobic001G459800 Sobic001G459800 Sobic007G213800--Sobic001G459800 Sobic009G036000 Sobic009G036000 Sobic001G320900--Sobic009G036000 Sobic001G320900--Sobic003G144700 Sobic001G320900--Sobic009G169000 Sobic001G320900--Sobic001G391500 Sobic001G320900--Sobic003G148600 Sobic009G036100 Sobic009G036100 Sobic001G320900--Sobic009G036100 Sobic001G320900--Sobic003G197200 Sobic001G320900--Sobic003G355100 Sobic001G320900--Sobic001G405500 Sobic003G355100--Sobic007G214600 Sobic003G355100--Sobic003G197200 Sobic003G355100--Sobic001G481300 Sobic003G355100--Sobic003G148600 Sobic003G355100--Sobic004G109600 Sobic003G355100--Sobic003G394400 Sobic001G108200 Sobic001G108200 Sobic003G355100--Sobic001G108200 Sobic003G355100--Sobic003G144700 Sobic003G355100--Sobic004G166200 Sobic001G391500--Sobic001G459800 Sobic004G141200 Sobic004G141200 Sobic001G391500--Sobic004G141200 Sobic001G391500--Sobic003G144700 Sobic001G391500--Sobic007G213800 Sobic001G391500--Sobic001G320900 Sobic001G391500--Sobic003G148600 Sobic003G369100 Sobic003G369100 Sobic001G391500--Sobic003G369100 Sobic001G391500--Sobic001G138600 Sobic007G074000 Sobic007G074000 Sobic001G391500--Sobic007G074000 Sobic009G169000--Sobic001G320900 Sobic009G169000--Sobic003G144700 Sobic004G280200 Sobic004G280200 Sobic009G169000--Sobic004G280200 Sobic009G169000--Sobic003G197200 Sobic009G169000--Sobic003G355100 Sobic009G169000--Sobic007G214600 Sobic009G169000--Sobic003G148600 Sobic009G169000--Sobic001G107800 Sobic007G026600 Sobic007G026600 Sobic009G169000--Sobic007G026600 Sobic003G123600--Sobic003G148600 Sobic003G123600--Sobic001G107800 Sobic002G415600 Sobic002G415600 Sobic003G123600--Sobic002G415600 Sobic003G123600--Sobic003G197200 Sobic003G123600--Sobic003G144700 Sobic001G076100 Sobic001G076100 Sobic003G123600--Sobic001G076100 Sobic006G230800 Sobic006G230800 Sobic003G123600--Sobic006G230800 Sobic006G190500 Sobic006G190500 Sobic003G123600--Sobic006G190500 Sobic003G123600--Sobic001G443800 Sobic006G230900--Sobic006G231200 Sobic006G231100 Sobic006G231100 Sobic006G230900--Sobic006G231100 Sobic006G230900--Sobic002G282300 Sobic006G230900--Sobic007G213800 Sobic010G217800 Sobic010G217800 Sobic006G230900--Sobic010G217800 Sobic006G230900--Sobic002G415600 Sobic006G230900--Sobic003G144700 Sobic006G230900--Sobic003G123600 Sobic006G230900--Sobic003G197200
Octagon: transcription factors


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