Gene annotation
Transcriptome id Sobic.003G148600.1
Synonym SbERF36, HRE2, Sb03g012890,ethylene response factor 36
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5XIU7
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G47520 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os01g21120.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005317 , Zm00025a000952 , Zm00025a043851 , Zm00025a037299 , Zm00025a052430 , Zm00025a020464 , Zm00025a023615 , Zm00025a033098 , Zm00025a024332 , Zm00025a011662 , Zm00025a036079 , Zm00025a000949 , Zm00025a035559
Brachypodium KQK23284 , KQK04134 , PNT78026
Barley HORVU2Hr1G018830.1 , HORVU2Hr1G018830.2 , HORVU7Hr1G055290.34 , HORVU7Hr1G055290.33 , HORVU7Hr1G055290.30 , HORVU7Hr1G055290.31 , HORVU4Hr1G077310.1 , HORVU4Hr1G077310.2 , HORVU4Hr1G077310.3 , HORVU4Hr1G077310.4 , HORVU4Hr1G077310.7 , HORVU4Hr1G077310.8 , HORVU4Hr1G077360.1 , HORVU4Hr1G077310.5 , HORVU5Hr1G080790.6 , HORVU5Hr1G080790.4 , HORVU5Hr1G080790.3 , HORVU5Hr1G080790.2 , HORVU5Hr1G080790.1 , HORVU1Hr1G082310.1
Wheat TraesCS2B02G127800 , TraesCS4B02G299500 , TraesCS4B02G299400 , TraesCS7B02G162100 , TraesCS5A02G314600 , TraesCS2A02G109800 , TraesCS7D02G265000 , TraesCS5B02G315500 , TraesCS5D02G320800 , TraesCS7A02G264100 , TraesCS4D02G298400 , TraesCS5B02G315500 , TraesCS2D02G110000 , TraesCS2D02G110000
Populus -


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cDNA sequences
Sobic.003G148600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G197200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
2 Sobic.003G123600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
4 Sobic.003G355100 expressed protein -
5 Sobic.007G214600 EF hand family protein, putative, expressed -
6 Sobic.004G166200 expressed protein -
7 Sobic.001G107800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase
9 Sobic.003G394400 ubiquitin family protein, putative, expressed -
10 Sobic.001G371800 expressed protein -
11 Sobic.001G391500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.001G443800 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
13 Sobic.001G320900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
14 Sobic.003G377100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
15 Sobic.003G382800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
16 Sobic.007G026600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
17 Sobic.002G068600 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
18 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
19 Sobic.001G076100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G108200 expressed protein -


Gene co-expression network
sample Sobic003G148600 Sobic003G148600 Sobic003G197200 Sobic003G197200 Sobic003G148600--Sobic003G197200 Sobic003G123600 Sobic003G123600 Sobic003G148600--Sobic003G123600 Sobic003G144700 Sobic003G144700 Sobic003G148600--Sobic003G144700 Sobic003G355100 Sobic003G355100 Sobic003G148600--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic003G148600--Sobic007G214600 Sobic004G166200 Sobic004G166200 Sobic003G148600--Sobic004G166200 Sobic001G107800 Sobic001G107800 Sobic003G148600--Sobic001G107800 Sobic001G405500 Sobic001G405500 Sobic003G148600--Sobic001G405500 Sobic003G394400 Sobic003G394400 Sobic003G148600--Sobic003G394400 Sobic003G197200--Sobic003G148600 Sobic003G197200--Sobic007G214600 Sobic003G197200--Sobic003G355100 Sobic003G197200--Sobic003G144700 Sobic001G443800 Sobic001G443800 Sobic003G197200--Sobic001G443800 Sobic001G481300 Sobic001G481300 Sobic003G197200--Sobic001G481300 Sobic001G201200 Sobic001G201200 Sobic003G197200--Sobic001G201200 Sobic004G109600 Sobic004G109600 Sobic003G197200--Sobic004G109600 Sobic003G197200--Sobic003G123600 Sobic003G123600--Sobic003G148600 Sobic003G123600--Sobic001G107800 Sobic002G415600 Sobic002G415600 Sobic003G123600--Sobic002G415600 Sobic003G123600--Sobic003G197200 Sobic003G123600--Sobic003G144700 Sobic001G076100 Sobic001G076100 Sobic003G123600--Sobic001G076100 Sobic006G230800 Sobic006G230800 Sobic003G123600--Sobic006G230800 Sobic006G190500 Sobic006G190500 Sobic003G123600--Sobic006G190500 Sobic003G123600--Sobic001G443800 Sobic003G144700--Sobic003G197200 Sobic003G144700--Sobic003G148600 Sobic007G213800 Sobic007G213800 Sobic003G144700--Sobic007G213800 Sobic001G320900 Sobic001G320900 Sobic003G144700--Sobic001G320900 Sobic003G144700--Sobic003G355100 Sobic001G391500 Sobic001G391500 Sobic003G144700--Sobic001G391500 Sobic009G169000 Sobic009G169000 Sobic003G144700--Sobic009G169000 Sobic003G144700--Sobic003G123600 Sobic006G230900 Sobic006G230900 Sobic003G144700--Sobic006G230900 Sobic003G355100--Sobic007G214600 Sobic003G355100--Sobic003G197200 Sobic003G355100--Sobic001G481300 Sobic003G355100--Sobic003G148600 Sobic003G355100--Sobic004G109600 Sobic003G355100--Sobic003G394400 Sobic001G108200 Sobic001G108200 Sobic003G355100--Sobic001G108200 Sobic003G355100--Sobic003G144700 Sobic003G355100--Sobic004G166200 Sobic007G214600--Sobic003G355100 Sobic007G214600--Sobic003G197200 Sobic007G214600--Sobic004G109600 Sobic007G214600--Sobic003G148600 Sobic007G214600--Sobic001G481300 Sobic010G198500 Sobic010G198500 Sobic007G214600--Sobic010G198500 Sobic001G371800 Sobic001G371800 Sobic007G214600--Sobic001G371800 Sobic007G214600--Sobic003G394400 Sobic007G214600--Sobic004G166200 Sobic004G166200--Sobic003G394400 Sobic002G068600 Sobic002G068600 Sobic004G166200--Sobic002G068600 Sobic004G166200--Sobic003G148600 Sobic004G166200--Sobic001G371800 Sobic004G166200--Sobic007G214600 Sobic004G166200--Sobic001G107800 Sobic004G166200--Sobic003G355100 Sobic003G382800 Sobic003G382800 Sobic004G166200--Sobic003G382800 Sobic004G166200--Sobic003G197200 Sobic001G107800--Sobic003G123600 Sobic001G107800--Sobic003G394400 Sobic007G214400 Sobic007G214400 Sobic001G107800--Sobic007G214400 Sobic001G107800--Sobic003G148600 Sobic002G261200 Sobic002G261200 Sobic001G107800--Sobic002G261200 Sobic001G107800--Sobic001G371800 Sobic001G254100 Sobic001G254100 Sobic001G107800--Sobic001G254100 Sobic001G107800--Sobic003G197200 Sobic001G107800--Sobic002G068600 Sobic003G086600 Sobic003G086600 Sobic001G405500--Sobic003G086600 Sobic001G405500--Sobic003G148600 Sobic001G405500--Sobic003G394400 Sobic001G405500--Sobic001G108200 Sobic007G026600 Sobic007G026600 Sobic001G405500--Sobic007G026600 Sobic001G405500--Sobic003G144700 Sobic001G405500--Sobic003G355100 Sobic001G405500--Sobic003G382800 Sobic006G267200 Sobic006G267200 Sobic001G405500--Sobic006G267200 Sobic003G394400--Sobic002G068600 Sobic003G394400--Sobic007G214400 Sobic003G394400--Sobic003G086600 Sobic003G394400--Sobic001G371800 Sobic003G394400--Sobic004G166200 Sobic003G394400--Sobic001G107800 Sobic003G394400--Sobic003G355100 Sobic003G394400--Sobic003G148600 Sobic003G394400--Sobic007G214600
Octagon: transcription factors


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