Gene annotation
Transcriptome id Sobic.003G197200.1
Synonym ACC oxidase 1, Sb03g026000, ACO1, ATACO1
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
Decreased expression in phyB-1 mutant (PubMedID : 26893475)
1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed
UniProt A0A1W0VY40
Pfam PF14226 PF03171
Panther DB PTHR10209 PTHR10209:SF103
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology K05933; aminocyclopropanecarboxylate oxidase
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT2G19590 : ACC oxidase 1
RAP-DB (Rice) LOC_Os01g39860.1 : 1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed
MaizeGDB (Corn) Zm00025a033063 , Zm00025a055410 , Zm00025a055405 , Zm00025a038390 , Zm00025a034057 , Zm00025a034056 , Zm00025a047223
Brachypodium KQJ90477 , KQK08434 , PNT72253
Barley HORVU5Hr1G067530.1 , HORVU5Hr1G067530.2 , HORVU5Hr1G067530.3 , HORVU5Hr1G067530.4 , HORVU5Hr1G067490.4 , HORVU5Hr1G067490.3 , HORVU5Hr1G067490.2 , HORVU5Hr1G067490.1 , HORVU7Hr1G116830.1 , HORVU7Hr1G116830.2 , HORVU7Hr1G116830.3 , HORVU7Hr1G116830.4 , HORVU7Hr1G116830.5 , HORVU7Hr1G116830.6 , HORVU7Hr1G116830.7
Wheat TraesCS7B02G444900 , TraesCS5D02G241000 , TraesCS7D02G516200 , TraesCS5A02G234300 , TraesCS5B02G232700 , TraesCS5D02G241100 , TraesCS5A02G234200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
2 Sobic.007G214600 EF hand family protein, putative, expressed -
3 Sobic.003G355100 expressed protein -
4 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
5 Sobic.001G443800 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
6 Sobic.001G481300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
7 Sobic.001G201200 - -
8 Sobic.004G109600 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.003G123600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G371800 expressed protein -
11 Sobic.001G107800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.010G198500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.004G166200 expressed protein -
14 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
15 Sobic.003G394400 ubiquitin family protein, putative, expressed -
16 Sobic.009G169000 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K01568: PDC, pyruvate decarboxylase
17 Sobic.001G320900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
18 Sobic.007G147700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR33 - Auxin-responsive SAUR gene family member, expressed -
19 Sobic.001G391500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.001G076100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G197200 Sobic003G197200 Sobic003G148600 Sobic003G148600 Sobic003G197200--Sobic003G148600 Sobic007G214600 Sobic007G214600 Sobic003G197200--Sobic007G214600 Sobic003G355100 Sobic003G355100 Sobic003G197200--Sobic003G355100 Sobic003G144700 Sobic003G144700 Sobic003G197200--Sobic003G144700 Sobic001G443800 Sobic001G443800 Sobic003G197200--Sobic001G443800 Sobic001G481300 Sobic001G481300 Sobic003G197200--Sobic001G481300 Sobic001G201200 Sobic001G201200 Sobic003G197200--Sobic001G201200 Sobic004G109600 Sobic004G109600 Sobic003G197200--Sobic004G109600 Sobic003G123600 Sobic003G123600 Sobic003G197200--Sobic003G123600 Sobic003G148600--Sobic003G197200 Sobic003G148600--Sobic003G123600 Sobic003G148600--Sobic003G144700 Sobic003G148600--Sobic003G355100 Sobic003G148600--Sobic007G214600 Sobic004G166200 Sobic004G166200 Sobic003G148600--Sobic004G166200 Sobic001G107800 Sobic001G107800 Sobic003G148600--Sobic001G107800 Sobic001G405500 Sobic001G405500 Sobic003G148600--Sobic001G405500 Sobic003G394400 Sobic003G394400 Sobic003G148600--Sobic003G394400 Sobic007G214600--Sobic003G355100 Sobic007G214600--Sobic003G197200 Sobic007G214600--Sobic004G109600 Sobic007G214600--Sobic003G148600 Sobic007G214600--Sobic001G481300 Sobic010G198500 Sobic010G198500 Sobic007G214600--Sobic010G198500 Sobic001G371800 Sobic001G371800 Sobic007G214600--Sobic001G371800 Sobic007G214600--Sobic003G394400 Sobic007G214600--Sobic004G166200 Sobic003G355100--Sobic007G214600 Sobic003G355100--Sobic003G197200 Sobic003G355100--Sobic001G481300 Sobic003G355100--Sobic003G148600 Sobic003G355100--Sobic004G109600 Sobic003G355100--Sobic003G394400 Sobic001G108200 Sobic001G108200 Sobic003G355100--Sobic001G108200 Sobic003G355100--Sobic003G144700 Sobic003G355100--Sobic004G166200 Sobic003G144700--Sobic003G197200 Sobic003G144700--Sobic003G148600 Sobic007G213800 Sobic007G213800 Sobic003G144700--Sobic007G213800 Sobic001G320900 Sobic001G320900 Sobic003G144700--Sobic001G320900 Sobic003G144700--Sobic003G355100 Sobic001G391500 Sobic001G391500 Sobic003G144700--Sobic001G391500 Sobic009G169000 Sobic009G169000 Sobic003G144700--Sobic009G169000 Sobic003G144700--Sobic003G123600 Sobic006G230900 Sobic006G230900 Sobic003G144700--Sobic006G230900 Sobic001G443800--Sobic003G197200 Sobic001G443800--Sobic001G201200 Sobic001G076100 Sobic001G076100 Sobic001G443800--Sobic001G076100 Sobic001G443800--Sobic003G148600 Sobic001G443800--Sobic001G371800 Sobic001G443800--Sobic010G198500 Sobic001G443800--Sobic003G123600 Sobic001G443800--Sobic007G214600 Sobic006G190100 Sobic006G190100 Sobic001G443800--Sobic006G190100 Sobic001G481300--Sobic003G355100 Sobic001G481300--Sobic004G109600 Sobic001G481300--Sobic003G197200 Sobic001G481300--Sobic007G214600 Sobic001G279350 Sobic001G279350 Sobic001G481300--Sobic001G279350 Sobic004G109700 Sobic004G109700 Sobic001G481300--Sobic004G109700 Sobic001G481300--Sobic003G148600 Sobic001G481300--Sobic001G371800 Sobic001G481300--Sobic010G198500 Sobic001G201200--Sobic001G443800 Sobic001G201200--Sobic001G371800 Sobic001G201200--Sobic003G197200 Sobic001G201200--Sobic010G198500 Sobic001G201200--Sobic001G076100 Sobic001G201200--Sobic007G214600 Sobic001G201200--Sobic001G107800 Sobic001G201200--Sobic003G148600 Sobic007G147700 Sobic007G147700 Sobic001G201200--Sobic007G147700 Sobic004G109600--Sobic001G481300 Sobic004G109600--Sobic003G355100 Sobic004G109600--Sobic007G214600 Sobic004G109600--Sobic004G109700 Sobic004G109600--Sobic003G197200 Sobic004G109600--Sobic010G198500 Sobic004G109600--Sobic003G148600 Sobic004G109600--Sobic001G371800 Sobic004G109600--Sobic001G201200 Sobic003G123600--Sobic003G148600 Sobic003G123600--Sobic001G107800 Sobic002G415600 Sobic002G415600 Sobic003G123600--Sobic002G415600 Sobic003G123600--Sobic003G197200 Sobic003G123600--Sobic003G144700 Sobic003G123600--Sobic001G076100 Sobic006G230800 Sobic006G230800 Sobic003G123600--Sobic006G230800 Sobic006G190500 Sobic006G190500 Sobic003G123600--Sobic006G190500 Sobic003G123600--Sobic001G443800
Octagon: transcription factors


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