Gene annotation
Transcriptome id Sobic.001G481300.1
Synonym Sb01g045050, SbERF10, HRE1, ethylene response factor 10
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt A0A1B6QQ51
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G72360 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os03g08500.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a000952 , Zm00025a000950 , Zm00025a049596 , Zm00025a057002 , Zm00025a020881 , Zm00025a009843
Brachypodium PNT78026 , PNT61818 , KQK19045
Barley HORVU4Hr1G077360.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G355100 expressed protein -
2 Sobic.004G109600 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.003G197200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
4 Sobic.007G214600 EF hand family protein, putative, expressed -
5 Sobic.001G279350 - -
6 Sobic.004G109700 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
8 Sobic.001G371800 expressed protein -
9 Sobic.010G198500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G201200 - -
11 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
12 Sobic.007G147700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR33 - Auxin-responsive SAUR gene family member, expressed -
13 Sobic.003G394400 ubiquitin family protein, putative, expressed -
14 Sobic.001G425600 "similar to 17.4 kDa class I heat shock protein 3, maped into a unique stay green QTL (QSTG11_1) involved in drought tolerance."(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@similar to 17.4 kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
15 Sobic.009G169000 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K01568: PDC, pyruvate decarboxylase
16 Sobic.004G166200 expressed protein -
17 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G425500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
19 Sobic.001G443800 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
20 Sobic.001G108200 expressed protein -


Gene co-expression network
sample Sobic001G481300 Sobic001G481300 Sobic003G355100 Sobic003G355100 Sobic001G481300--Sobic003G355100 Sobic004G109600 Sobic004G109600 Sobic001G481300--Sobic004G109600 Sobic003G197200 Sobic003G197200 Sobic001G481300--Sobic003G197200 Sobic007G214600 Sobic007G214600 Sobic001G481300--Sobic007G214600 Sobic001G279350 Sobic001G279350 Sobic001G481300--Sobic001G279350 Sobic004G109700 Sobic004G109700 Sobic001G481300--Sobic004G109700 Sobic003G148600 Sobic003G148600 Sobic001G481300--Sobic003G148600 Sobic001G371800 Sobic001G371800 Sobic001G481300--Sobic001G371800 Sobic010G198500 Sobic010G198500 Sobic001G481300--Sobic010G198500 Sobic003G355100--Sobic007G214600 Sobic003G355100--Sobic003G197200 Sobic003G355100--Sobic001G481300 Sobic003G355100--Sobic003G148600 Sobic003G355100--Sobic004G109600 Sobic003G394400 Sobic003G394400 Sobic003G355100--Sobic003G394400 Sobic001G108200 Sobic001G108200 Sobic003G355100--Sobic001G108200 Sobic003G144700 Sobic003G144700 Sobic003G355100--Sobic003G144700 Sobic004G166200 Sobic004G166200 Sobic003G355100--Sobic004G166200 Sobic004G109600--Sobic001G481300 Sobic004G109600--Sobic003G355100 Sobic004G109600--Sobic007G214600 Sobic004G109600--Sobic004G109700 Sobic004G109600--Sobic003G197200 Sobic004G109600--Sobic010G198500 Sobic004G109600--Sobic003G148600 Sobic004G109600--Sobic001G371800 Sobic001G201200 Sobic001G201200 Sobic004G109600--Sobic001G201200 Sobic003G197200--Sobic003G148600 Sobic003G197200--Sobic007G214600 Sobic003G197200--Sobic003G355100 Sobic003G197200--Sobic003G144700 Sobic001G443800 Sobic001G443800 Sobic003G197200--Sobic001G443800 Sobic003G197200--Sobic001G481300 Sobic003G197200--Sobic001G201200 Sobic003G197200--Sobic004G109600 Sobic003G123600 Sobic003G123600 Sobic003G197200--Sobic003G123600 Sobic007G214600--Sobic003G355100 Sobic007G214600--Sobic003G197200 Sobic007G214600--Sobic004G109600 Sobic007G214600--Sobic003G148600 Sobic007G214600--Sobic001G481300 Sobic007G214600--Sobic010G198500 Sobic007G214600--Sobic001G371800 Sobic007G214600--Sobic003G394400 Sobic007G214600--Sobic004G166200 Sobic001G279350--Sobic001G481300 Sobic001G279350--Sobic004G109600 Sobic007G147700 Sobic007G147700 Sobic001G279350--Sobic007G147700 Sobic001G279350--Sobic003G355100 Sobic001G425600 Sobic001G425600 Sobic001G279350--Sobic001G425600 Sobic001G279350--Sobic004G109700 Sobic001G279350--Sobic003G197200 Sobic001G425500 Sobic001G425500 Sobic001G279350--Sobic001G425500 Sobic001G279350--Sobic007G214600 Sobic004G109700--Sobic004G109600 Sobic004G109700--Sobic001G425600 Sobic004G109700--Sobic001G425500 Sobic004G109700--Sobic001G481300 Sobic010G196600 Sobic010G196600 Sobic004G109700--Sobic010G196600 Sobic009G194400 Sobic009G194400 Sobic004G109700--Sobic009G194400 Sobic003G323201 Sobic003G323201 Sobic004G109700--Sobic003G323201 Sobic004G109700--Sobic007G214600 Sobic004G109700--Sobic001G279350 Sobic003G148600--Sobic003G197200 Sobic003G148600--Sobic003G123600 Sobic003G148600--Sobic003G144700 Sobic003G148600--Sobic003G355100 Sobic003G148600--Sobic007G214600 Sobic003G148600--Sobic004G166200 Sobic001G107800 Sobic001G107800 Sobic003G148600--Sobic001G107800 Sobic001G405500 Sobic001G405500 Sobic003G148600--Sobic001G405500 Sobic003G148600--Sobic003G394400 Sobic007G214400 Sobic007G214400 Sobic001G371800--Sobic007G214400 Sobic001G371800--Sobic003G394400 Sobic001G371800--Sobic001G201200 Sobic002G389000 Sobic002G389000 Sobic001G371800--Sobic002G389000 Sobic001G371800--Sobic004G166200 Sobic001G371800--Sobic001G107800 Sobic001G371800--Sobic007G214600 Sobic001G371800--Sobic003G197200 Sobic001G371800--Sobic003G148600 Sobic010G198500--Sobic007G214600 Sobic010G198500--Sobic001G201200 Sobic010G198500--Sobic003G197200 Sobic010G198500--Sobic007G147700 Sobic010G198500--Sobic001G443800 Sobic010G198500--Sobic004G109600 Sobic010G198500--Sobic001G371800 Sobic010G198500--Sobic003G355100 Sobic010G198500--Sobic001G481300
Octagon: transcription factors


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