Gene annotation
Transcriptome id Sobic.010G196600.1
Synonym Sb10g024580
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Z680
Pfam PF14009
Panther DB PTHR33052 PTHR33052:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76600 : -
RAP-DB (Rice) LOC_Os06g41940.1 : expressed protein
MaizeGDB (Corn) Zm00025a042107 , Zm00025a051496
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G194400 expressed protein -
2 Sobic.001G425500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
3 Sobic.004G109700 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.004G283500 MATE domain containing protein, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
5 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
6 Sobic.003G323201 - -
7 Sobic.008G187001 - K09422: transcription factor MYB, plant
8 Sobic.001G425600 "similar to 17.4 kDa class I heat shock protein 3, maped into a unique stay green QTL (QSTG11_1) involved in drought tolerance."(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@similar to 17.4 kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
9 Sobic.004G109600 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.007G155200 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
11 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
12 Sobic.001G481300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
14 Sobic.006G207000 expressed protein -
15 Sobic.001G426000 Up-reguralion under heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
16 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
17 Sobic.001G440200 senescence-associated protein, putative, expressed -
18 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
19 Sobic.010G223600 ubiquitin family protein, putative, expressed K08770: ubiquitin C
20 Sobic.009G144700 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic010G196600 Sobic010G196600 Sobic009G194400 Sobic009G194400 Sobic010G196600--Sobic009G194400 Sobic001G425500 Sobic001G425500 Sobic010G196600--Sobic001G425500 Sobic004G109700 Sobic004G109700 Sobic010G196600--Sobic004G109700 Sobic004G283500 Sobic004G283500 Sobic010G196600--Sobic004G283500 Sobic002G388900 Sobic002G388900 Sobic010G196600--Sobic002G388900 Sobic003G323201 Sobic003G323201 Sobic010G196600--Sobic003G323201 Sobic008G187001 Sobic008G187001 Sobic010G196600--Sobic008G187001 Sobic001G425600 Sobic001G425600 Sobic010G196600--Sobic001G425600 Sobic004G109600 Sobic004G109600 Sobic010G196600--Sobic004G109600 Sobic009G194400--Sobic010G196600 Sobic009G194400--Sobic001G425500 Sobic009G194400--Sobic003G323201 Sobic009G194400--Sobic001G425600 Sobic003G370600 Sobic003G370600 Sobic009G194400--Sobic003G370600 Sobic009G194400--Sobic004G109700 Sobic004G097100 Sobic004G097100 Sobic009G194400--Sobic004G097100 Sobic009G194400--Sobic002G388900 Sobic004G092800 Sobic004G092800 Sobic009G194400--Sobic004G092800 Sobic001G425500--Sobic001G425600 Sobic001G425500--Sobic004G109700 Sobic001G425500--Sobic009G194400 Sobic001G425500--Sobic010G196600 Sobic004G273300 Sobic004G273300 Sobic001G425500--Sobic004G273300 Sobic001G425500--Sobic003G323201 Sobic001G425500--Sobic004G092800 Sobic001G425500--Sobic004G109600 Sobic001G481300 Sobic001G481300 Sobic001G425500--Sobic001G481300 Sobic004G109700--Sobic004G109600 Sobic004G109700--Sobic001G425600 Sobic004G109700--Sobic001G425500 Sobic004G109700--Sobic001G481300 Sobic004G109700--Sobic010G196600 Sobic004G109700--Sobic009G194400 Sobic004G109700--Sobic003G323201 Sobic007G214600 Sobic007G214600 Sobic004G109700--Sobic007G214600 Sobic001G279350 Sobic001G279350 Sobic004G109700--Sobic001G279350 Sobic004G283500--Sobic010G196600 Sobic007G036900 Sobic007G036900 Sobic004G283500--Sobic007G036900 Sobic001G320900 Sobic001G320900 Sobic004G283500--Sobic001G320900 Sobic001G391500 Sobic001G391500 Sobic004G283500--Sobic001G391500 Sobic009G036000 Sobic009G036000 Sobic004G283500--Sobic009G036000 Sobic002G339000 Sobic002G339000 Sobic004G283500--Sobic002G339000 Sobic001G440200 Sobic001G440200 Sobic004G283500--Sobic001G440200 Sobic007G155200 Sobic007G155200 Sobic004G283500--Sobic007G155200 Sobic003G144700 Sobic003G144700 Sobic004G283500--Sobic003G144700 Sobic002G388900--Sobic008G187001 Sobic001G256700 Sobic001G256700 Sobic002G388900--Sobic001G256700 Sobic009G144700 Sobic009G144700 Sobic002G388900--Sobic009G144700 Sobic001G330100 Sobic001G330100 Sobic002G388900--Sobic001G330100 Sobic009G241801 Sobic009G241801 Sobic002G388900--Sobic009G241801 Sobic009G032000 Sobic009G032000 Sobic002G388900--Sobic009G032000 Sobic004G352000 Sobic004G352000 Sobic002G388900--Sobic004G352000 Sobic004G219800 Sobic004G219800 Sobic002G388900--Sobic004G219800 Sobic004G308900 Sobic004G308900 Sobic002G388900--Sobic004G308900 Sobic003G323201--Sobic009G194400 Sobic003G323201--Sobic010G196600 Sobic003G323201--Sobic001G425500 Sobic003G323201--Sobic004G109700 Sobic003G323201--Sobic001G425600 Sobic003G323201--Sobic004G308900 Sobic003G323201--Sobic004G109600 Sobic003G323201--Sobic002G388900 Sobic003G323201--Sobic009G144700 Sobic008G187001--Sobic002G388900 Sobic008G187001--Sobic001G256700 Sobic008G187001--Sobic007G036900 Sobic009G224100 Sobic009G224100 Sobic008G187001--Sobic009G224100 Sobic008G187001--Sobic004G219800 Sobic008G187001--Sobic009G032000 Sobic008G187001--Sobic001G330100 Sobic009G122400 Sobic009G122400 Sobic008G187001--Sobic009G122400 Sobic008G187001--Sobic004G352000 Sobic001G425600--Sobic001G425500 Sobic001G425600--Sobic004G109700 Sobic001G425600--Sobic004G273300 Sobic001G425600--Sobic009G194400 Sobic001G425600--Sobic004G109600 Sobic001G425600--Sobic001G481300 Sobic001G425600--Sobic010G196600 Sobic001G425600--Sobic001G279350 Sobic001G425600--Sobic003G323201 Sobic004G109600--Sobic001G481300 Sobic003G355100 Sobic003G355100 Sobic004G109600--Sobic003G355100 Sobic004G109600--Sobic007G214600 Sobic004G109600--Sobic004G109700 Sobic003G197200 Sobic003G197200 Sobic004G109600--Sobic003G197200 Sobic010G198500 Sobic010G198500 Sobic004G109600--Sobic010G198500 Sobic003G148600 Sobic003G148600 Sobic004G109600--Sobic003G148600 Sobic001G371800 Sobic001G371800 Sobic004G109600--Sobic001G371800 Sobic001G201200 Sobic001G201200 Sobic004G109600--Sobic001G201200
Octagon: transcription factors


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