Gene annotation
Transcriptome id Sobic.002G339000.1,Sobic.002G339000.2
Synonym Sb02g036360
Functional annotation OsFBX257 - F-box domain containing protein, expressed
UniProt C5XBJ9
Pfam PF00646
Panther DB PTHR34049
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G61340 : F-box family protein
RAP-DB (Rice) LOC_Os07g37400.1 : OsFBX257 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a048385 , Zm00025a014903
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G004500 lactate/malate dehydrogenase, putative, expressed K00016: LDH, L-lactate dehydrogenase
2 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
3 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
4 Sobic.003G148300 pectinesterase, putative, expressed K01051: pectinesterase
5 Sobic.001G195200 cytochrome P450, putative, expressed -
6 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
7 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
8 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
9 Sobic.007G214600 EF hand family protein, putative, expressed -
10 Sobic.008G187001 - K09422: transcription factor MYB, plant
11 Sobic.004G294400 expansin precursor, putative, expressed -
12 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
13 Sobic.001G108200 expressed protein -
14 Sobic.009G189501 - -
15 Sobic.004G308900 AP2 domain containing protein, expressed -
16 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
17 Sobic.009G036000 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
18 Sobic.003G260300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.001G481100 DUF581 domain containing protein, expressed -
20 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -


Gene co-expression network
sample Sobic002G339000 Sobic002G339000 Sobic004G004500 Sobic004G004500 Sobic002G339000--Sobic004G004500 Sobic001G256700 Sobic001G256700 Sobic002G339000--Sobic001G256700 Sobic007G036900 Sobic007G036900 Sobic002G339000--Sobic007G036900 Sobic003G148300 Sobic003G148300 Sobic002G339000--Sobic003G148300 Sobic001G195200 Sobic001G195200 Sobic002G339000--Sobic001G195200 Sobic004G169200 Sobic004G169200 Sobic002G339000--Sobic004G169200 Sobic004G108200 Sobic004G108200 Sobic002G339000--Sobic004G108200 Sobic002G395300 Sobic002G395300 Sobic002G339000--Sobic002G395300 Sobic007G214600 Sobic007G214600 Sobic002G339000--Sobic007G214600 Sobic004G004500--Sobic002G339000 Sobic004G004500--Sobic001G256700 Sobic004G004500--Sobic007G036900 Sobic004G004500--Sobic003G148300 Sobic004G004500--Sobic004G108200 Sobic004G004500--Sobic001G195200 Sobic009G189501 Sobic009G189501 Sobic004G004500--Sobic009G189501 Sobic004G294400 Sobic004G294400 Sobic004G004500--Sobic004G294400 Sobic004G229800 Sobic004G229800 Sobic004G004500--Sobic004G229800 Sobic008G187001 Sobic008G187001 Sobic001G256700--Sobic008G187001 Sobic001G256700--Sobic004G004500 Sobic002G388900 Sobic002G388900 Sobic001G256700--Sobic002G388900 Sobic001G256700--Sobic004G294400 Sobic004G219800 Sobic004G219800 Sobic001G256700--Sobic004G219800 Sobic001G256700--Sobic002G395300 Sobic001G256700--Sobic002G339000 Sobic001G330100 Sobic001G330100 Sobic001G256700--Sobic001G330100 Sobic001G256700--Sobic001G195200 Sobic007G036900--Sobic004G004500 Sobic007G036900--Sobic008G187001 Sobic007G036900--Sobic004G229800 Sobic007G036900--Sobic001G256700 Sobic004G141200 Sobic004G141200 Sobic007G036900--Sobic004G141200 Sobic007G036900--Sobic002G339000 Sobic003G364600 Sobic003G364600 Sobic007G036900--Sobic003G364600 Sobic001G108200 Sobic001G108200 Sobic007G036900--Sobic001G108200 Sobic001G079300 Sobic001G079300 Sobic007G036900--Sobic001G079300 Sobic003G148300--Sobic004G108200 Sobic003G148300--Sobic004G004500 Sobic004G086400 Sobic004G086400 Sobic003G148300--Sobic004G086400 Sobic009G144700 Sobic009G144700 Sobic003G148300--Sobic009G144700 Sobic003G148300--Sobic004G294400 Sobic003G148300--Sobic001G256700 Sobic003G148300--Sobic001G330100 Sobic003G148300--Sobic002G339000 Sobic010G212800 Sobic010G212800 Sobic003G148300--Sobic010G212800 Sobic001G195200--Sobic004G294400 Sobic001G195200--Sobic001G256700 Sobic004G308900 Sobic004G308900 Sobic001G195200--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic001G195200--Sobic002G358300 Sobic007G122800 Sobic007G122800 Sobic001G195200--Sobic007G122800 Sobic001G195200--Sobic004G004500 Sobic001G195200--Sobic004G108200 Sobic001G195200--Sobic002G395300 Sobic004G191300 Sobic004G191300 Sobic001G195200--Sobic004G191300 Sobic004G169200--Sobic002G395300 Sobic004G169200--Sobic002G358300 Sobic003G428700 Sobic003G428700 Sobic004G169200--Sobic003G428700 Sobic006G263600 Sobic006G263600 Sobic004G169200--Sobic006G263600 Sobic004G191400 Sobic004G191400 Sobic004G169200--Sobic004G191400 Sobic009G122400 Sobic009G122400 Sobic004G169200--Sobic009G122400 Sobic010G209200 Sobic010G209200 Sobic004G169200--Sobic010G209200 Sobic002G220000 Sobic002G220000 Sobic004G169200--Sobic002G220000 Sobic004G169200--Sobic002G339000 Sobic004G108200--Sobic003G148300 Sobic004G108200--Sobic009G144700 Sobic004G108200--Sobic004G294400 Sobic004G108200--Sobic001G256700 Sobic004G108200--Sobic001G330100 Sobic004G108200--Sobic004G004500 Sobic004G108200--Sobic002G395300 Sobic004G108200--Sobic001G195200 Sobic002G234400 Sobic002G234400 Sobic004G108200--Sobic002G234400 Sobic002G395300--Sobic001G256700 Sobic002G395300--Sobic001G330100 Sobic002G395300--Sobic004G169200 Sobic002G395300--Sobic004G294400 Sobic002G395300--Sobic002G388900 Sobic002G395300--Sobic004G108200 Sobic002G395300--Sobic001G195200 Sobic002G395300--Sobic009G144700 Sobic009G032000 Sobic009G032000 Sobic002G395300--Sobic009G032000 Sobic003G355100 Sobic003G355100 Sobic007G214600--Sobic003G355100 Sobic003G197200 Sobic003G197200 Sobic007G214600--Sobic003G197200 Sobic004G109600 Sobic004G109600 Sobic007G214600--Sobic004G109600 Sobic003G148600 Sobic003G148600 Sobic007G214600--Sobic003G148600 Sobic001G481300 Sobic001G481300 Sobic007G214600--Sobic001G481300 Sobic010G198500 Sobic010G198500 Sobic007G214600--Sobic010G198500 Sobic001G371800 Sobic001G371800 Sobic007G214600--Sobic001G371800 Sobic003G394400 Sobic003G394400 Sobic007G214600--Sobic003G394400 Sobic004G166200 Sobic004G166200 Sobic007G214600--Sobic004G166200
Octagon: transcription factors


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