Gene annotation
Transcriptome id Sobic.002G395300.1
Synonym AtCXE18, CXE18, Sb02g041050
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt C5X3Z2
Pfam PF12695
Panther DB PTHR23024 PTHR23024:SF152
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23530 : carboxyesterase 18
RAP-DB (Rice) LOC_Os07g44910.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a048958
Brachypodium KQK14956 , KQK14954 , KQK14951
Barley HORVU1Hr1G037570.1 , HORVU1Hr1G037570.2 , HORVU2Hr1G025300.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
2 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
3 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
4 Sobic.004G294400 expansin precursor, putative, expressed -
5 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
6 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
7 Sobic.001G195200 cytochrome P450, putative, expressed -
8 Sobic.009G144700 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.004G004500 lactate/malate dehydrogenase, putative, expressed K00016: LDH, L-lactate dehydrogenase
12 Sobic.001G481100 DUF581 domain containing protein, expressed -
13 Sobic.002G358300 expressed protein -
14 Sobic.004G308900 AP2 domain containing protein, expressed -
15 Sobic.008G187001 - K09422: transcription factor MYB, plant
16 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
17 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
18 Sobic.004G352000 cytochrome P450, putative, expressed -
19 Sobic.003G148300 pectinesterase, putative, expressed K01051: pectinesterase
20 Sobic.004G191400 - -


Gene co-expression network
sample Sobic002G395300 Sobic002G395300 Sobic001G256700 Sobic001G256700 Sobic002G395300--Sobic001G256700 Sobic001G330100 Sobic001G330100 Sobic002G395300--Sobic001G330100 Sobic004G169200 Sobic004G169200 Sobic002G395300--Sobic004G169200 Sobic004G294400 Sobic004G294400 Sobic002G395300--Sobic004G294400 Sobic002G388900 Sobic002G388900 Sobic002G395300--Sobic002G388900 Sobic004G108200 Sobic004G108200 Sobic002G395300--Sobic004G108200 Sobic001G195200 Sobic001G195200 Sobic002G395300--Sobic001G195200 Sobic009G144700 Sobic009G144700 Sobic002G395300--Sobic009G144700 Sobic009G032000 Sobic009G032000 Sobic002G395300--Sobic009G032000 Sobic008G187001 Sobic008G187001 Sobic001G256700--Sobic008G187001 Sobic004G004500 Sobic004G004500 Sobic001G256700--Sobic004G004500 Sobic001G256700--Sobic002G388900 Sobic001G256700--Sobic004G294400 Sobic004G219800 Sobic004G219800 Sobic001G256700--Sobic004G219800 Sobic001G256700--Sobic002G395300 Sobic002G339000 Sobic002G339000 Sobic001G256700--Sobic002G339000 Sobic001G256700--Sobic001G330100 Sobic001G256700--Sobic001G195200 Sobic001G330200 Sobic001G330200 Sobic001G330100--Sobic001G330200 Sobic001G330100--Sobic009G144700 Sobic001G330100--Sobic002G388900 Sobic001G330100--Sobic001G256700 Sobic001G330100--Sobic004G219800 Sobic001G330100--Sobic002G395300 Sobic001G330100--Sobic004G108200 Sobic004G352000 Sobic004G352000 Sobic001G330100--Sobic004G352000 Sobic001G330100--Sobic004G294400 Sobic004G169200--Sobic002G395300 Sobic002G358300 Sobic002G358300 Sobic004G169200--Sobic002G358300 Sobic003G428700 Sobic003G428700 Sobic004G169200--Sobic003G428700 Sobic006G263600 Sobic006G263600 Sobic004G169200--Sobic006G263600 Sobic004G191400 Sobic004G191400 Sobic004G169200--Sobic004G191400 Sobic009G122400 Sobic009G122400 Sobic004G169200--Sobic009G122400 Sobic010G209200 Sobic010G209200 Sobic004G169200--Sobic010G209200 Sobic002G220000 Sobic002G220000 Sobic004G169200--Sobic002G220000 Sobic004G169200--Sobic002G339000 Sobic007G017500 Sobic007G017500 Sobic004G294400--Sobic007G017500 Sobic004G294400--Sobic001G256700 Sobic006G075400 Sobic006G075400 Sobic004G294400--Sobic006G075400 Sobic004G294400--Sobic004G108200 Sobic004G294400--Sobic001G195200 Sobic007G122800 Sobic007G122800 Sobic004G294400--Sobic007G122800 Sobic003G228900 Sobic003G228900 Sobic004G294400--Sobic003G228900 Sobic004G294400--Sobic002G395300 Sobic004G191300 Sobic004G191300 Sobic004G294400--Sobic004G191300 Sobic002G388900--Sobic008G187001 Sobic002G388900--Sobic001G256700 Sobic002G388900--Sobic009G144700 Sobic002G388900--Sobic001G330100 Sobic009G241801 Sobic009G241801 Sobic002G388900--Sobic009G241801 Sobic002G388900--Sobic009G032000 Sobic002G388900--Sobic004G352000 Sobic002G388900--Sobic004G219800 Sobic004G308900 Sobic004G308900 Sobic002G388900--Sobic004G308900 Sobic003G148300 Sobic003G148300 Sobic004G108200--Sobic003G148300 Sobic004G108200--Sobic009G144700 Sobic004G108200--Sobic004G294400 Sobic004G108200--Sobic001G256700 Sobic004G108200--Sobic001G330100 Sobic004G108200--Sobic004G004500 Sobic004G108200--Sobic002G395300 Sobic004G108200--Sobic001G195200 Sobic002G234400 Sobic002G234400 Sobic004G108200--Sobic002G234400 Sobic001G195200--Sobic004G294400 Sobic001G195200--Sobic001G256700 Sobic001G195200--Sobic004G308900 Sobic001G195200--Sobic002G358300 Sobic001G195200--Sobic007G122800 Sobic001G195200--Sobic004G004500 Sobic001G195200--Sobic004G108200 Sobic001G195200--Sobic002G395300 Sobic001G195200--Sobic004G191300 Sobic009G144700--Sobic004G108200 Sobic009G144700--Sobic001G330100 Sobic009G144700--Sobic002G388900 Sobic009G144700--Sobic004G352000 Sobic009G144700--Sobic001G256700 Sobic009G144700--Sobic001G330200 Sobic009G144700--Sobic003G148300 Sobic009G144700--Sobic004G294400 Sobic009G144700--Sobic002G395300 Sobic009G032000--Sobic001G256700 Sobic009G032000--Sobic002G388900 Sobic009G032000--Sobic004G219800 Sobic009G032000--Sobic002G358300 Sobic009G032000--Sobic004G308900 Sobic004G246600 Sobic004G246600 Sobic009G032000--Sobic004G246600 Sobic009G032000--Sobic001G330100 Sobic005G013500 Sobic005G013500 Sobic009G032000--Sobic005G013500 Sobic009G032000--Sobic002G395300
Octagon: transcription factors


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