Gene annotation
Transcriptome id Sobic.009G032000.1
Synonym MYB108, BOS1, AtMYB108, Sb09g002680
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt A0A1B6P6K7
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF494
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G48000 : myb domain protein 112
RAP-DB (Rice) LOC_Os05g04210.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a023641 , Zm00025a033716 , Zm00025a035541 , Zm00025a053397 , Zm00025a025444 , Zm00025a029124 , Zm00025a055298 , Zm00025a055299 , Zm00025a041179 , Zm00025a004957 , Zm00025a015471 , Zm00025a040888 , Zm00025a052506 , Zm00025a000572 , Zm00025a004179 , Zm00025a011116 , Zm00025a002214
Brachypodium KQK07738 , KQK04064 , KQJ86312 , KQK07949 , KQK11803 , KQK11802 , KQK21947 , KQK11806 , KQK11805 , KQK11804 , PNT73697 , PNT73696 , KQJ87229 , KQK23714 , KQJ83493
Barley HORVU0Hr1G006810.2 , HORVU0Hr1G006810.1 , HORVU4Hr1G049630.2 , HORVU4Hr1G049630.1 , HORVU2Hr1G120340.21 , HORVU2Hr1G120340.20 , HORVU2Hr1G120340.23 , HORVU2Hr1G120340.22 , HORVU2Hr1G120340.25 , HORVU2Hr1G120340.24 , HORVU2Hr1G120340.26 , HORVU2Hr1G120340.29 , HORVU2Hr1G120340.28 , HORVU4Hr1G084360.3 , HORVU4Hr1G084360.2 , HORVU4Hr1G084360.1 , HORVU2Hr1G016380.1 , HORVU6Hr1G057670.3 , HORVU6Hr1G057670.1 , HORVU3Hr1G004050.2 , HORVU3Hr1G004050.3 , HORVU3Hr1G004050.1 , HORVU2Hr1G120340.36 , HORVU2Hr1G120340.37 , HORVU2Hr1G120340.34 , HORVU2Hr1G120340.35 , HORVU2Hr1G120340.32 , HORVU2Hr1G120340.33 , HORVU2Hr1G120340.30 , HORVU2Hr1G120340.38 , HORVU2Hr1G120340.39 , HORVU2Hr1G120340.43 , HORVU2Hr1G120340.42 , HORVU2Hr1G120340.41 , HORVU2Hr1G120340.40 , HORVU2Hr1G120340.47 , HORVU2Hr1G120340.46 , HORVU2Hr1G120340.45 , HORVU2Hr1G120340.48 , HORVU4Hr1G052490.11 , HORVU4Hr1G052490.6 , HORVU4Hr1G052490.7 , HORVU4Hr1G052490.4 , HORVU4Hr1G052490.5 , HORVU4Hr1G052490.2 , HORVU4Hr1G052490.3 , HORVU4Hr1G052490.1 , HORVU4Hr1G052490.8 , HORVU4Hr1G052490.9 , HORVU1Hr1G008810.3 , HORVU1Hr1G008810.5 , HORVU2Hr1G016380.2 , HORVU2Hr1G016380.3 , HORVU3Hr1G092820.1 , HORVU3Hr1G092820.2 , HORVU3Hr1G092820.3 , HORVU2Hr1G120340.50 , HORVU2Hr1G120340.51 , HORVU2Hr1G120340.52 , HORVU2Hr1G120340.53 , HORVU2Hr1G120340.18 , HORVU2Hr1G120340.19 , HORVU2Hr1G120340.14 , HORVU2Hr1G120340.15 , HORVU2Hr1G120340.16 , HORVU2Hr1G120340.17 , HORVU2Hr1G120340.11 , HORVU2Hr1G120340.12 , HORVU2Hr1G120340.13 , HORVU2Hr1G120340.6 , HORVU2Hr1G120340.7 , HORVU2Hr1G120340.4 , HORVU2Hr1G120340.5 , HORVU2Hr1G120340.2 , HORVU2Hr1G120340.3 , HORVU2Hr1G120340.1 , HORVU2Hr1G120340.8
Wheat TraesCS4D02G339100 , TraesCS3D02G540600 , TraesCS1D02G043300 , TraesCS1D02G043300 , TraesCS4D02G181100 , TraesCS1A02G076200 , TraesCS3A02G535100 , TraesCS4B02G344000 , TraesCS1B02G055200 , TraesCS2A02G552400 , TraesCS2B02G583800 , TraesCS5A02G512700 , TraesCS3B02G039100 , TraesCS4B02G179500 , TraesCS6A02G227700 , TraesCS3A02G286600 , TraesCS4A02G124900 , TraesCS3B02G612200 , TraesCS1A02G042700 , TraesCS3A02G044700 , TraesCS3D02G036200 , TraesCS2D02G324800 , TraesCS2A02G338200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
2 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
3 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.002G358300 expressed protein -
5 Sobic.004G308900 AP2 domain containing protein, expressed -
6 Sobic.004G246600 expressed protein -
7 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
8 Sobic.005G013500 WRKY52, expressed -
9 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
10 Sobic.009G144700 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.004G294400 expansin precursor, putative, expressed -
12 Sobic.004G352000 cytochrome P450, putative, expressed -
13 Sobic.008G187001 - K09422: transcription factor MYB, plant
14 Sobic.001G195200 cytochrome P450, putative, expressed -
15 Sobic.007G122800 expressed protein -
16 Sobic.001G330400 ZOS3-11 - C2H2 zinc finger protein, expressed -
17 Sobic.002G184300 heat shock protein DnaJ, putative, expressed -
18 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
19 Sobic.004G097100 F-box family protein, putative, expressed -
20 Sobic.009G241801 - -


Gene co-expression network
sample Sobic009G032000 Sobic009G032000 Sobic001G256700 Sobic001G256700 Sobic009G032000--Sobic001G256700 Sobic002G388900 Sobic002G388900 Sobic009G032000--Sobic002G388900 Sobic004G219800 Sobic004G219800 Sobic009G032000--Sobic004G219800 Sobic002G358300 Sobic002G358300 Sobic009G032000--Sobic002G358300 Sobic004G308900 Sobic004G308900 Sobic009G032000--Sobic004G308900 Sobic004G246600 Sobic004G246600 Sobic009G032000--Sobic004G246600 Sobic001G330100 Sobic001G330100 Sobic009G032000--Sobic001G330100 Sobic005G013500 Sobic005G013500 Sobic009G032000--Sobic005G013500 Sobic002G395300 Sobic002G395300 Sobic009G032000--Sobic002G395300 Sobic008G187001 Sobic008G187001 Sobic001G256700--Sobic008G187001 Sobic004G004500 Sobic004G004500 Sobic001G256700--Sobic004G004500 Sobic001G256700--Sobic002G388900 Sobic004G294400 Sobic004G294400 Sobic001G256700--Sobic004G294400 Sobic001G256700--Sobic004G219800 Sobic001G256700--Sobic002G395300 Sobic002G339000 Sobic002G339000 Sobic001G256700--Sobic002G339000 Sobic001G256700--Sobic001G330100 Sobic001G195200 Sobic001G195200 Sobic001G256700--Sobic001G195200 Sobic002G388900--Sobic008G187001 Sobic002G388900--Sobic001G256700 Sobic009G144700 Sobic009G144700 Sobic002G388900--Sobic009G144700 Sobic002G388900--Sobic001G330100 Sobic009G241801 Sobic009G241801 Sobic002G388900--Sobic009G241801 Sobic002G388900--Sobic009G032000 Sobic004G352000 Sobic004G352000 Sobic002G388900--Sobic004G352000 Sobic002G388900--Sobic004G219800 Sobic002G388900--Sobic004G308900 Sobic004G219800--Sobic001G256700 Sobic004G219800--Sobic001G330100 Sobic004G219800--Sobic004G352000 Sobic001G330400 Sobic001G330400 Sobic004G219800--Sobic001G330400 Sobic004G219800--Sobic009G032000 Sobic004G219800--Sobic008G187001 Sobic004G219800--Sobic002G388900 Sobic007G017500 Sobic007G017500 Sobic004G219800--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic004G219800--Sobic006G075400 Sobic002G358300--Sobic004G308900 Sobic007G122800 Sobic007G122800 Sobic002G358300--Sobic007G122800 Sobic002G358300--Sobic001G195200 Sobic002G358300--Sobic009G032000 Sobic004G191400 Sobic004G191400 Sobic002G358300--Sobic004G191400 Sobic004G169200 Sobic004G169200 Sobic002G358300--Sobic004G169200 Sobic004G191300 Sobic004G191300 Sobic002G358300--Sobic004G191300 Sobic002G358300--Sobic002G395300 Sobic002G358300--Sobic004G294400 Sobic004G308900--Sobic002G358300 Sobic004G308900--Sobic007G122800 Sobic004G308900--Sobic001G195200 Sobic004G308900--Sobic001G256700 Sobic004G308900--Sobic004G191400 Sobic004G308900--Sobic009G032000 Sobic004G308900--Sobic004G246600 Sobic004G308900--Sobic002G388900 Sobic004G308900--Sobic004G191300 Sobic004G229500 Sobic004G229500 Sobic004G246600--Sobic004G229500 Sobic004G246600--Sobic009G032000 Sobic004G246600--Sobic004G308900 Sobic004G246600--Sobic005G013500 Sobic004G246600--Sobic002G358300 Sobic004G097100 Sobic004G097100 Sobic004G246600--Sobic004G097100 Sobic001G143100 Sobic001G143100 Sobic004G246600--Sobic001G143100 Sobic002G269100 Sobic002G269100 Sobic004G246600--Sobic002G269100 Sobic002G184300 Sobic002G184300 Sobic004G246600--Sobic002G184300 Sobic001G330200 Sobic001G330200 Sobic001G330100--Sobic001G330200 Sobic001G330100--Sobic009G144700 Sobic001G330100--Sobic002G388900 Sobic001G330100--Sobic001G256700 Sobic001G330100--Sobic004G219800 Sobic001G330100--Sobic002G395300 Sobic004G108200 Sobic004G108200 Sobic001G330100--Sobic004G108200 Sobic001G330100--Sobic004G352000 Sobic001G330100--Sobic004G294400 Sobic005G013500--Sobic004G229500 Sobic009G183900 Sobic009G183900 Sobic005G013500--Sobic009G183900 Sobic005G013500--Sobic004G246600 Sobic005G013500--Sobic009G032000 Sobic005G013500--Sobic009G144700 Sobic005G013500--Sobic004G097100 Sobic001G363400 Sobic001G363400 Sobic005G013500--Sobic001G363400 Sobic005G013500--Sobic004G294400 Sobic005G013500--Sobic004G108200 Sobic002G395300--Sobic001G256700 Sobic002G395300--Sobic001G330100 Sobic002G395300--Sobic004G169200 Sobic002G395300--Sobic004G294400 Sobic002G395300--Sobic002G388900 Sobic002G395300--Sobic004G108200 Sobic002G395300--Sobic001G195200 Sobic002G395300--Sobic009G144700 Sobic002G395300--Sobic009G032000
Octagon: transcription factors


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