Gene annotation
Transcriptome id Sobic.001G195200.1
Synonym Sb01g017170
Functional annotation cytochrome P450, putative, expressed
UniProt C5WVE9
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF88
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G64940 : cytochrome P450, family 87, subfamily A, polypeptide 6
RAP-DB (Rice) LOC_Os10g37110.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a014968 , Zm00025a006324 , Zm00025a006320 , Zm00025a010446
Brachypodium PNT66391 , KQJ97398
Barley HORVU1Hr1G080340.1 , HORVU1Hr1G086920.2 , HORVU1Hr1G086920.3 , HORVU1Hr1G086920.1 , HORVU4Hr1G089230.2 , HORVU4Hr1G089230.3 , HORVU4Hr1G089230.1 , HORVU1Hr1G047030.7 , HORVU1Hr1G047030.6 , HORVU1Hr1G047030.3 , HORVU1Hr1G047030.2 , HORVU1Hr1G047030.1 , HORVU1Hr1G047030.9 , HORVU1Hr1G047030.8 , HORVU1Hr1G047030.10 , HORVU1Hr1G047090.1 , HORVU1Hr1G047090.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G294400 expansin precursor, putative, expressed -
2 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
3 Sobic.004G308900 AP2 domain containing protein, expressed -
4 Sobic.002G358300 expressed protein -
5 Sobic.007G122800 expressed protein -
6 Sobic.004G004500 lactate/malate dehydrogenase, putative, expressed K00016: LDH, L-lactate dehydrogenase
7 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
8 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
9 Sobic.004G191300 - -
10 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
11 Sobic.003G260300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
14 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
15 Sobic.004G191400 - -
16 Sobic.009G122400 expressed protein -
17 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
18 Sobic.008G187001 - K09422: transcription factor MYB, plant
19 Sobic.007G017500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
20 Sobic.001G079300 helix-loop-helix DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic001G195200 Sobic001G195200 Sobic004G294400 Sobic004G294400 Sobic001G195200--Sobic004G294400 Sobic001G256700 Sobic001G256700 Sobic001G195200--Sobic001G256700 Sobic004G308900 Sobic004G308900 Sobic001G195200--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic001G195200--Sobic002G358300 Sobic007G122800 Sobic007G122800 Sobic001G195200--Sobic007G122800 Sobic004G004500 Sobic004G004500 Sobic001G195200--Sobic004G004500 Sobic004G108200 Sobic004G108200 Sobic001G195200--Sobic004G108200 Sobic002G395300 Sobic002G395300 Sobic001G195200--Sobic002G395300 Sobic004G191300 Sobic004G191300 Sobic001G195200--Sobic004G191300 Sobic007G017500 Sobic007G017500 Sobic004G294400--Sobic007G017500 Sobic004G294400--Sobic001G256700 Sobic006G075400 Sobic006G075400 Sobic004G294400--Sobic006G075400 Sobic004G294400--Sobic004G108200 Sobic004G294400--Sobic001G195200 Sobic004G294400--Sobic007G122800 Sobic003G228900 Sobic003G228900 Sobic004G294400--Sobic003G228900 Sobic004G294400--Sobic002G395300 Sobic004G294400--Sobic004G191300 Sobic008G187001 Sobic008G187001 Sobic001G256700--Sobic008G187001 Sobic001G256700--Sobic004G004500 Sobic002G388900 Sobic002G388900 Sobic001G256700--Sobic002G388900 Sobic001G256700--Sobic004G294400 Sobic004G219800 Sobic004G219800 Sobic001G256700--Sobic004G219800 Sobic001G256700--Sobic002G395300 Sobic002G339000 Sobic002G339000 Sobic001G256700--Sobic002G339000 Sobic001G330100 Sobic001G330100 Sobic001G256700--Sobic001G330100 Sobic001G256700--Sobic001G195200 Sobic004G308900--Sobic002G358300 Sobic004G308900--Sobic007G122800 Sobic004G308900--Sobic001G195200 Sobic004G308900--Sobic001G256700 Sobic004G191400 Sobic004G191400 Sobic004G308900--Sobic004G191400 Sobic009G032000 Sobic009G032000 Sobic004G308900--Sobic009G032000 Sobic004G246600 Sobic004G246600 Sobic004G308900--Sobic004G246600 Sobic004G308900--Sobic002G388900 Sobic004G308900--Sobic004G191300 Sobic002G358300--Sobic004G308900 Sobic002G358300--Sobic007G122800 Sobic002G358300--Sobic001G195200 Sobic002G358300--Sobic009G032000 Sobic002G358300--Sobic004G191400 Sobic004G169200 Sobic004G169200 Sobic002G358300--Sobic004G169200 Sobic002G358300--Sobic004G191300 Sobic002G358300--Sobic002G395300 Sobic002G358300--Sobic004G294400 Sobic007G122800--Sobic002G358300 Sobic007G122800--Sobic004G308900 Sobic007G122800--Sobic004G191400 Sobic007G122800--Sobic004G294400 Sobic007G122800--Sobic004G191300 Sobic007G122800--Sobic001G195200 Sobic006G007900 Sobic006G007900 Sobic007G122800--Sobic006G007900 Sobic009G122400 Sobic009G122400 Sobic007G122800--Sobic009G122400 Sobic003G268600 Sobic003G268600 Sobic007G122800--Sobic003G268600 Sobic004G004500--Sobic002G339000 Sobic004G004500--Sobic001G256700 Sobic007G036900 Sobic007G036900 Sobic004G004500--Sobic007G036900 Sobic003G148300 Sobic003G148300 Sobic004G004500--Sobic003G148300 Sobic004G004500--Sobic004G108200 Sobic004G004500--Sobic001G195200 Sobic009G189501 Sobic009G189501 Sobic004G004500--Sobic009G189501 Sobic004G004500--Sobic004G294400 Sobic004G229800 Sobic004G229800 Sobic004G004500--Sobic004G229800 Sobic004G108200--Sobic003G148300 Sobic009G144700 Sobic009G144700 Sobic004G108200--Sobic009G144700 Sobic004G108200--Sobic004G294400 Sobic004G108200--Sobic001G256700 Sobic004G108200--Sobic001G330100 Sobic004G108200--Sobic004G004500 Sobic004G108200--Sobic002G395300 Sobic004G108200--Sobic001G195200 Sobic002G234400 Sobic002G234400 Sobic004G108200--Sobic002G234400 Sobic002G395300--Sobic001G256700 Sobic002G395300--Sobic001G330100 Sobic002G395300--Sobic004G169200 Sobic002G395300--Sobic004G294400 Sobic002G395300--Sobic002G388900 Sobic002G395300--Sobic004G108200 Sobic002G395300--Sobic001G195200 Sobic002G395300--Sobic009G144700 Sobic002G395300--Sobic009G032000 Sobic004G191300--Sobic004G191400 Sobic004G191300--Sobic009G122400 Sobic001G079300 Sobic001G079300 Sobic004G191300--Sobic001G079300 Sobic010G209200 Sobic010G209200 Sobic004G191300--Sobic010G209200 Sobic004G191300--Sobic007G122800 Sobic004G191300--Sobic004G294400 Sobic004G191300--Sobic004G308900 Sobic004G191300--Sobic002G358300 Sobic004G191300--Sobic001G195200
Octagon: transcription factors


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