Gene annotation
Transcriptome id Sobic.002G388900.1
Synonym P450 CYP709C1, CYP709B2, Sb02g040500
Functional annotation Upregulated in cold tolerant sorghum under stress (PubMedID : 26645959)
cytochrome P450 72A1, putative, expressed
UniProt C5X3A2
Pfam PF00067
Panther DB PTHR24282 PTHR24282:SF44
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G46950 : cytochrome P450, family 709, subfamily B, polypeptide 2
RAP-DB (Rice) LOC_Os07g23570.1 : cytochrome P450 72A1, putative, expressed
MaizeGDB (Corn) Zm00025a048892 , Zm00025a051370 , Zm00025a015288 , Zm00025a015287 , Zm00025a042420 , Zm00025a049716 , Zm00025a031104
Brachypodium KQK15033 , KQK15036 , KQK12899 , KQK19190
Barley HORVU2Hr1G027460.1 , HORVU2Hr1G027460.3 , HORVU2Hr1G027460.2 , HORVU7Hr1G031730.3 , HORVU7Hr1G031730.2 , HORVU7Hr1G031730.1 , HORVU7Hr1G031730.6 , HORVU7Hr1G031730.5 , HORVU5Hr1G114900.8 , HORVU3Hr1G056770.1 , HORVU2Hr1G027480.3 , HORVU2Hr1G027480.2 , HORVU2Hr1G027480.1 , HORVU2Hr1G027480.6 , HORVU2Hr1G027480.5 , HORVU2Hr1G027480.4 , HORVU2Hr1G027470.6 , HORVU2Hr1G027470.4 , HORVU2Hr1G027470.5 , HORVU2Hr1G027470.2 , HORVU2Hr1G027470.3 , HORVU2Hr1G027470.1
Wheat TraesCS7D02G155400 , TraesCS2B02G177500 , TraesCS2A02G152400 , TraesCS2D02G157400 , TraesCS7A02G155000 , TraesCS2D02G157800 , TraesCS2D02G157300 , TraesCS5D02G501600 , TraesCS2D02G157500 , TraesCS2A02G152200 , TraesCS2D02G157900 , TraesCS7B02G059100 , TraesCS2B02G177600 , TraesCS2B02G177300 , TraesCS2A02G152500 , TraesCS5B02G501100 , TraesCS7D02G155300 , TraesCS2A02G152300 , TraesCS2D02G157600 , TraesCS2B02G177400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G187001 - K09422: transcription factor MYB, plant
2 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
3 Sobic.009G144700 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
5 Sobic.009G241801 - -
6 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.004G352000 cytochrome P450, putative, expressed -
8 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.004G308900 AP2 domain containing protein, expressed -
10 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
11 Sobic.009G122400 expressed protein -
12 Sobic.009G144600 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
14 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
15 Sobic.001G195200 cytochrome P450, putative, expressed -
16 Sobic.004G294400 expansin precursor, putative, expressed -
17 Sobic.004G097100 F-box family protein, putative, expressed -
18 Sobic.001G330200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS3-12 - C2H2 zinc finger protein, expressed -
19 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
20 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G388900 Sobic002G388900 Sobic008G187001 Sobic008G187001 Sobic002G388900--Sobic008G187001 Sobic001G256700 Sobic001G256700 Sobic002G388900--Sobic001G256700 Sobic009G144700 Sobic009G144700 Sobic002G388900--Sobic009G144700 Sobic001G330100 Sobic001G330100 Sobic002G388900--Sobic001G330100 Sobic009G241801 Sobic009G241801 Sobic002G388900--Sobic009G241801 Sobic009G032000 Sobic009G032000 Sobic002G388900--Sobic009G032000 Sobic004G352000 Sobic004G352000 Sobic002G388900--Sobic004G352000 Sobic004G219800 Sobic004G219800 Sobic002G388900--Sobic004G219800 Sobic004G308900 Sobic004G308900 Sobic002G388900--Sobic004G308900 Sobic008G187001--Sobic002G388900 Sobic008G187001--Sobic001G256700 Sobic007G036900 Sobic007G036900 Sobic008G187001--Sobic007G036900 Sobic009G224100 Sobic009G224100 Sobic008G187001--Sobic009G224100 Sobic008G187001--Sobic004G219800 Sobic008G187001--Sobic009G032000 Sobic008G187001--Sobic001G330100 Sobic009G122400 Sobic009G122400 Sobic008G187001--Sobic009G122400 Sobic008G187001--Sobic004G352000 Sobic001G256700--Sobic008G187001 Sobic004G004500 Sobic004G004500 Sobic001G256700--Sobic004G004500 Sobic001G256700--Sobic002G388900 Sobic004G294400 Sobic004G294400 Sobic001G256700--Sobic004G294400 Sobic001G256700--Sobic004G219800 Sobic002G395300 Sobic002G395300 Sobic001G256700--Sobic002G395300 Sobic002G339000 Sobic002G339000 Sobic001G256700--Sobic002G339000 Sobic001G256700--Sobic001G330100 Sobic001G195200 Sobic001G195200 Sobic001G256700--Sobic001G195200 Sobic004G108200 Sobic004G108200 Sobic009G144700--Sobic004G108200 Sobic009G144700--Sobic001G330100 Sobic009G144700--Sobic002G388900 Sobic009G144700--Sobic004G352000 Sobic009G144700--Sobic001G256700 Sobic001G330200 Sobic001G330200 Sobic009G144700--Sobic001G330200 Sobic003G148300 Sobic003G148300 Sobic009G144700--Sobic003G148300 Sobic009G144700--Sobic004G294400 Sobic009G144700--Sobic002G395300 Sobic001G330100--Sobic001G330200 Sobic001G330100--Sobic009G144700 Sobic001G330100--Sobic002G388900 Sobic001G330100--Sobic001G256700 Sobic001G330100--Sobic004G219800 Sobic001G330100--Sobic002G395300 Sobic001G330100--Sobic004G108200 Sobic001G330100--Sobic004G352000 Sobic001G330100--Sobic004G294400 Sobic009G241801--Sobic002G388900 Sobic009G241801--Sobic001G330100 Sobic009G241801--Sobic008G187001 Sobic004G097100 Sobic004G097100 Sobic009G241801--Sobic004G097100 Sobic009G241801--Sobic009G144700 Sobic009G241801--Sobic001G256700 Sobic009G241801--Sobic004G219800 Sobic009G241801--Sobic009G032000 Sobic009G241801--Sobic004G308900 Sobic009G032000--Sobic001G256700 Sobic009G032000--Sobic002G388900 Sobic009G032000--Sobic004G219800 Sobic002G358300 Sobic002G358300 Sobic009G032000--Sobic002G358300 Sobic009G032000--Sobic004G308900 Sobic004G246600 Sobic004G246600 Sobic009G032000--Sobic004G246600 Sobic009G032000--Sobic001G330100 Sobic005G013500 Sobic005G013500 Sobic009G032000--Sobic005G013500 Sobic009G032000--Sobic002G395300 Sobic003G370600 Sobic003G370600 Sobic004G352000--Sobic003G370600 Sobic004G352000--Sobic009G144700 Sobic004G352000--Sobic004G219800 Sobic004G352000--Sobic001G256700 Sobic004G352000--Sobic001G330100 Sobic004G352000--Sobic002G388900 Sobic004G352000--Sobic004G108200 Sobic004G352000--Sobic009G032000 Sobic004G352000--Sobic008G187001 Sobic004G219800--Sobic001G256700 Sobic004G219800--Sobic001G330100 Sobic004G219800--Sobic004G352000 Sobic001G330400 Sobic001G330400 Sobic004G219800--Sobic001G330400 Sobic004G219800--Sobic009G032000 Sobic004G219800--Sobic008G187001 Sobic004G219800--Sobic002G388900 Sobic007G017500 Sobic007G017500 Sobic004G219800--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic004G219800--Sobic006G075400 Sobic004G308900--Sobic002G358300 Sobic007G122800 Sobic007G122800 Sobic004G308900--Sobic007G122800 Sobic004G308900--Sobic001G195200 Sobic004G308900--Sobic001G256700 Sobic004G191400 Sobic004G191400 Sobic004G308900--Sobic004G191400 Sobic004G308900--Sobic009G032000 Sobic004G308900--Sobic004G246600 Sobic004G308900--Sobic002G388900 Sobic004G191300 Sobic004G191300 Sobic004G308900--Sobic004G191300
Octagon: transcription factors


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