Gene annotation
Transcriptome id Sobic.009G241801.1
Synonym -
Functional annotation -
UniProt A0A1Z5R401
Pfam -
Panther DB PTHR33702 PTHR33702:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g50100.1 : expressed protein
MaizeGDB (Corn) Zm00025a036676 , Zm00025a044674
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
2 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
3 Sobic.008G187001 - K09422: transcription factor MYB, plant
4 Sobic.004G097100 F-box family protein, putative, expressed -
5 Sobic.009G144700 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
7 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.004G308900 AP2 domain containing protein, expressed -
10 Sobic.009G144600 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -
12 Sobic.004G352000 cytochrome P450, putative, expressed -
13 Sobic.001G330200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS3-12 - C2H2 zinc finger protein, expressed -
14 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
15 Sobic.002G184300 heat shock protein DnaJ, putative, expressed -
16 Sobic.009G122400 expressed protein -
17 Sobic.002G358300 expressed protein -
18 Sobic.002G220000 expressed protein -
19 Sobic.003G230100 expressed protein -
20 Sobic.003G349600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-14 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic009G241801 Sobic009G241801 Sobic002G388900 Sobic002G388900 Sobic009G241801--Sobic002G388900 Sobic001G330100 Sobic001G330100 Sobic009G241801--Sobic001G330100 Sobic008G187001 Sobic008G187001 Sobic009G241801--Sobic008G187001 Sobic004G097100 Sobic004G097100 Sobic009G241801--Sobic004G097100 Sobic009G144700 Sobic009G144700 Sobic009G241801--Sobic009G144700 Sobic001G256700 Sobic001G256700 Sobic009G241801--Sobic001G256700 Sobic004G219800 Sobic004G219800 Sobic009G241801--Sobic004G219800 Sobic009G032000 Sobic009G032000 Sobic009G241801--Sobic009G032000 Sobic004G308900 Sobic004G308900 Sobic009G241801--Sobic004G308900 Sobic002G388900--Sobic008G187001 Sobic002G388900--Sobic001G256700 Sobic002G388900--Sobic009G144700 Sobic002G388900--Sobic001G330100 Sobic002G388900--Sobic009G241801 Sobic002G388900--Sobic009G032000 Sobic004G352000 Sobic004G352000 Sobic002G388900--Sobic004G352000 Sobic002G388900--Sobic004G219800 Sobic002G388900--Sobic004G308900 Sobic001G330200 Sobic001G330200 Sobic001G330100--Sobic001G330200 Sobic001G330100--Sobic009G144700 Sobic001G330100--Sobic002G388900 Sobic001G330100--Sobic001G256700 Sobic001G330100--Sobic004G219800 Sobic002G395300 Sobic002G395300 Sobic001G330100--Sobic002G395300 Sobic004G108200 Sobic004G108200 Sobic001G330100--Sobic004G108200 Sobic001G330100--Sobic004G352000 Sobic004G294400 Sobic004G294400 Sobic001G330100--Sobic004G294400 Sobic008G187001--Sobic002G388900 Sobic008G187001--Sobic001G256700 Sobic007G036900 Sobic007G036900 Sobic008G187001--Sobic007G036900 Sobic009G224100 Sobic009G224100 Sobic008G187001--Sobic009G224100 Sobic008G187001--Sobic004G219800 Sobic008G187001--Sobic009G032000 Sobic008G187001--Sobic001G330100 Sobic009G122400 Sobic009G122400 Sobic008G187001--Sobic009G122400 Sobic008G187001--Sobic004G352000 Sobic003G230100 Sobic003G230100 Sobic004G097100--Sobic003G230100 Sobic004G229500 Sobic004G229500 Sobic004G097100--Sobic004G229500 Sobic004G246600 Sobic004G246600 Sobic004G097100--Sobic004G246600 Sobic006G187900 Sobic006G187900 Sobic004G097100--Sobic006G187900 Sobic004G097100--Sobic009G241801 Sobic005G013500 Sobic005G013500 Sobic004G097100--Sobic005G013500 Sobic004G097100--Sobic002G388900 Sobic004G097100--Sobic004G308900 Sobic002G184300 Sobic002G184300 Sobic004G097100--Sobic002G184300 Sobic009G144700--Sobic004G108200 Sobic009G144700--Sobic001G330100 Sobic009G144700--Sobic002G388900 Sobic009G144700--Sobic004G352000 Sobic009G144700--Sobic001G256700 Sobic009G144700--Sobic001G330200 Sobic003G148300 Sobic003G148300 Sobic009G144700--Sobic003G148300 Sobic009G144700--Sobic004G294400 Sobic009G144700--Sobic002G395300 Sobic001G256700--Sobic008G187001 Sobic004G004500 Sobic004G004500 Sobic001G256700--Sobic004G004500 Sobic001G256700--Sobic002G388900 Sobic001G256700--Sobic004G294400 Sobic001G256700--Sobic004G219800 Sobic001G256700--Sobic002G395300 Sobic002G339000 Sobic002G339000 Sobic001G256700--Sobic002G339000 Sobic001G256700--Sobic001G330100 Sobic001G195200 Sobic001G195200 Sobic001G256700--Sobic001G195200 Sobic004G219800--Sobic001G256700 Sobic004G219800--Sobic001G330100 Sobic004G219800--Sobic004G352000 Sobic001G330400 Sobic001G330400 Sobic004G219800--Sobic001G330400 Sobic004G219800--Sobic009G032000 Sobic004G219800--Sobic008G187001 Sobic004G219800--Sobic002G388900 Sobic007G017500 Sobic007G017500 Sobic004G219800--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic004G219800--Sobic006G075400 Sobic009G032000--Sobic001G256700 Sobic009G032000--Sobic002G388900 Sobic009G032000--Sobic004G219800 Sobic002G358300 Sobic002G358300 Sobic009G032000--Sobic002G358300 Sobic009G032000--Sobic004G308900 Sobic009G032000--Sobic004G246600 Sobic009G032000--Sobic001G330100 Sobic009G032000--Sobic005G013500 Sobic009G032000--Sobic002G395300 Sobic004G308900--Sobic002G358300 Sobic007G122800 Sobic007G122800 Sobic004G308900--Sobic007G122800 Sobic004G308900--Sobic001G195200 Sobic004G308900--Sobic001G256700 Sobic004G191400 Sobic004G191400 Sobic004G308900--Sobic004G191400 Sobic004G308900--Sobic009G032000 Sobic004G308900--Sobic004G246600 Sobic004G308900--Sobic002G388900 Sobic004G191300 Sobic004G191300 Sobic004G308900--Sobic004G191300
Octagon: transcription factors


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