Gene annotation
Transcriptome id Sobic.009G144600.1
Synonym Sb09g020960
Functional annotation peroxidase precursor, putative, expressed
UniProt C5YY92
Pfam PF00141
Panther DB PTHR31388 PTHR31388:SF38
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT5G06730 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os03g13180.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a018007 , Zm00025a019999 , Zm00025a024385
Brachypodium KQJ86402 , KQJ86398 , KQK03757 , KQK16275 , KQK01984
Barley HORVU3Hr1G036790.1 , HORVU3Hr1G036790.3 , HORVU3Hr1G027850.7 , HORVU3Hr1G027850.1 , HORVU3Hr1G027850.5 , HORVU3Hr1G027850.6 , HORVU3Hr1G027850.3 , HORVU3Hr1G027850.4
Wheat TraesCS6B02G071200 , TraesCS6A02G118300 , TraesCS2A02G108300 , TraesCS1D02G174200 , TraesCS5D02G256400 , TraesCS2A02G108500 , TraesCS4B02G385000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
2 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.008G187001 - K09422: transcription factor MYB, plant
4 Sobic.009G241801 - -
5 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
6 Sobic.004G352000 cytochrome P450, putative, expressed -
7 Sobic.002G139400 AP2 domain containing protein, expressed -
8 Sobic.002G184300 heat shock protein DnaJ, putative, expressed -
9 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
10 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.003G265000 expressed protein -
12 Sobic.010G063033 - -
13 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
15 Sobic.009G144700 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
17 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
18 Sobic.009G122400 expressed protein -
19 Sobic.003G230100 expressed protein -
20 Sobic.001G018300 cytochrome P450 71E1, putative, expressed -


Gene co-expression network
sample Sobic009G144600 Sobic009G144600 Sobic002G388900 Sobic002G388900 Sobic009G144600--Sobic002G388900 Sobic004G219800 Sobic004G219800 Sobic009G144600--Sobic004G219800 Sobic008G187001 Sobic008G187001 Sobic009G144600--Sobic008G187001 Sobic009G241801 Sobic009G241801 Sobic009G144600--Sobic009G241801 Sobic002G184200 Sobic002G184200 Sobic009G144600--Sobic002G184200 Sobic004G352000 Sobic004G352000 Sobic009G144600--Sobic004G352000 Sobic002G139400 Sobic002G139400 Sobic009G144600--Sobic002G139400 Sobic002G184300 Sobic002G184300 Sobic009G144600--Sobic002G184300 Sobic001G330100 Sobic001G330100 Sobic009G144600--Sobic001G330100 Sobic002G388900--Sobic008G187001 Sobic001G256700 Sobic001G256700 Sobic002G388900--Sobic001G256700 Sobic009G144700 Sobic009G144700 Sobic002G388900--Sobic009G144700 Sobic002G388900--Sobic001G330100 Sobic002G388900--Sobic009G241801 Sobic009G032000 Sobic009G032000 Sobic002G388900--Sobic009G032000 Sobic002G388900--Sobic004G352000 Sobic002G388900--Sobic004G219800 Sobic004G308900 Sobic004G308900 Sobic002G388900--Sobic004G308900 Sobic004G219800--Sobic001G256700 Sobic004G219800--Sobic001G330100 Sobic004G219800--Sobic004G352000 Sobic001G330400 Sobic001G330400 Sobic004G219800--Sobic001G330400 Sobic004G219800--Sobic009G032000 Sobic004G219800--Sobic008G187001 Sobic004G219800--Sobic002G388900 Sobic007G017500 Sobic007G017500 Sobic004G219800--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic004G219800--Sobic006G075400 Sobic008G187001--Sobic002G388900 Sobic008G187001--Sobic001G256700 Sobic007G036900 Sobic007G036900 Sobic008G187001--Sobic007G036900 Sobic009G224100 Sobic009G224100 Sobic008G187001--Sobic009G224100 Sobic008G187001--Sobic004G219800 Sobic008G187001--Sobic009G032000 Sobic008G187001--Sobic001G330100 Sobic009G122400 Sobic009G122400 Sobic008G187001--Sobic009G122400 Sobic008G187001--Sobic004G352000 Sobic009G241801--Sobic002G388900 Sobic009G241801--Sobic001G330100 Sobic009G241801--Sobic008G187001 Sobic004G097100 Sobic004G097100 Sobic009G241801--Sobic004G097100 Sobic009G241801--Sobic009G144700 Sobic009G241801--Sobic001G256700 Sobic009G241801--Sobic004G219800 Sobic009G241801--Sobic009G032000 Sobic009G241801--Sobic004G308900 Sobic002G184200--Sobic009G224100 Sobic002G184200--Sobic002G139400 Sobic004G243100 Sobic004G243100 Sobic002G184200--Sobic004G243100 Sobic004G221500 Sobic004G221500 Sobic002G184200--Sobic004G221500 Sobic007G067400 Sobic007G067400 Sobic002G184200--Sobic007G067400 Sobic010G084700 Sobic010G084700 Sobic002G184200--Sobic010G084700 Sobic007G155200 Sobic007G155200 Sobic002G184200--Sobic007G155200 Sobic007G155100 Sobic007G155100 Sobic002G184200--Sobic007G155100 Sobic001G423800 Sobic001G423800 Sobic002G184200--Sobic001G423800 Sobic003G370600 Sobic003G370600 Sobic004G352000--Sobic003G370600 Sobic004G352000--Sobic009G144700 Sobic004G352000--Sobic004G219800 Sobic004G352000--Sobic001G256700 Sobic004G352000--Sobic001G330100 Sobic004G352000--Sobic002G388900 Sobic004G108200 Sobic004G108200 Sobic004G352000--Sobic004G108200 Sobic004G352000--Sobic009G032000 Sobic004G352000--Sobic008G187001 Sobic002G139400--Sobic004G243100 Sobic002G139400--Sobic009G224100 Sobic002G139400--Sobic002G184200 Sobic001G192200 Sobic001G192200 Sobic002G139400--Sobic001G192200 Sobic001G231400 Sobic001G231400 Sobic002G139400--Sobic001G231400 Sobic002G251000 Sobic002G251000 Sobic002G139400--Sobic002G251000 Sobic003G282901 Sobic003G282901 Sobic002G139400--Sobic003G282901 Sobic001G018300 Sobic001G018300 Sobic002G139400--Sobic001G018300 Sobic002G139400--Sobic001G423800 Sobic001G363400 Sobic001G363400 Sobic002G184300--Sobic001G363400 Sobic003G230100 Sobic003G230100 Sobic002G184300--Sobic003G230100 Sobic002G358300 Sobic002G358300 Sobic002G184300--Sobic002G358300 Sobic002G184300--Sobic004G097100 Sobic002G184300--Sobic009G032000 Sobic009G205500 Sobic009G205500 Sobic002G184300--Sobic009G205500 Sobic004G246600 Sobic004G246600 Sobic002G184300--Sobic004G246600 Sobic005G013500 Sobic005G013500 Sobic002G184300--Sobic005G013500 Sobic002G184300--Sobic004G308900 Sobic001G330200 Sobic001G330200 Sobic001G330100--Sobic001G330200 Sobic001G330100--Sobic009G144700 Sobic001G330100--Sobic002G388900 Sobic001G330100--Sobic001G256700 Sobic001G330100--Sobic004G219800 Sobic002G395300 Sobic002G395300 Sobic001G330100--Sobic002G395300 Sobic001G330100--Sobic004G108200 Sobic001G330100--Sobic004G352000 Sobic004G294400 Sobic004G294400 Sobic001G330100--Sobic004G294400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.