Gene annotation
Transcriptome id Sobic.008G187001.1
Synonym -
Functional annotation -
UniProt A0A1Z5R8F4
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF654
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36890 : Duplicated homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os08g15020.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a047090 , Zm00025a029124 , Zm00025a055298 , Zm00025a015471 , Zm00025a011116
Brachypodium KQK03128 , KQK00034 , KQK04064 , KQJ99288 , KQK02077 , PNT70109 , KQK09332
Barley HORVU1Hr1G084170.3 , HORVU1Hr1G084170.1 , HORVU1Hr1G084170.7 , HORVU1Hr1G084170.6 , HORVU1Hr1G084170.5 , HORVU1Hr1G084170.4 , HORVU1Hr1G084170.8
Wheat TraesCS1A02G252600 , TraesCS6A02G344700 , TraesCS5A02G534400 , TraesCS1B02G265400 , TraesCS3D02G109800 , TraesCS6B02G377400 , TraesCS1D02G415000 , TraesCS1D02G252300 , TraesCS1D02G387100 , TraesCS1B02G401700 , TraesCS1A02G379700 , TraesCS6B02G324600 , TraesCS6B02G324600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
2 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
3 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
4 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
5 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
8 Sobic.009G122400 expressed protein -
9 Sobic.004G352000 cytochrome P450, putative, expressed -
10 Sobic.009G241801 - -
11 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
12 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
13 Sobic.009G144700 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
15 Sobic.004G308900 AP2 domain containing protein, expressed -
16 Sobic.004G004500 lactate/malate dehydrogenase, putative, expressed K00016: LDH, L-lactate dehydrogenase
17 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
18 Sobic.009G144600 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.001G195200 cytochrome P450, putative, expressed -
20 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic008G187001 Sobic008G187001 Sobic002G388900 Sobic002G388900 Sobic008G187001--Sobic002G388900 Sobic001G256700 Sobic001G256700 Sobic008G187001--Sobic001G256700 Sobic007G036900 Sobic007G036900 Sobic008G187001--Sobic007G036900 Sobic009G224100 Sobic009G224100 Sobic008G187001--Sobic009G224100 Sobic004G219800 Sobic004G219800 Sobic008G187001--Sobic004G219800 Sobic009G032000 Sobic009G032000 Sobic008G187001--Sobic009G032000 Sobic001G330100 Sobic001G330100 Sobic008G187001--Sobic001G330100 Sobic009G122400 Sobic009G122400 Sobic008G187001--Sobic009G122400 Sobic004G352000 Sobic004G352000 Sobic008G187001--Sobic004G352000 Sobic002G388900--Sobic008G187001 Sobic002G388900--Sobic001G256700 Sobic009G144700 Sobic009G144700 Sobic002G388900--Sobic009G144700 Sobic002G388900--Sobic001G330100 Sobic009G241801 Sobic009G241801 Sobic002G388900--Sobic009G241801 Sobic002G388900--Sobic009G032000 Sobic002G388900--Sobic004G352000 Sobic002G388900--Sobic004G219800 Sobic004G308900 Sobic004G308900 Sobic002G388900--Sobic004G308900 Sobic001G256700--Sobic008G187001 Sobic004G004500 Sobic004G004500 Sobic001G256700--Sobic004G004500 Sobic001G256700--Sobic002G388900 Sobic004G294400 Sobic004G294400 Sobic001G256700--Sobic004G294400 Sobic001G256700--Sobic004G219800 Sobic002G395300 Sobic002G395300 Sobic001G256700--Sobic002G395300 Sobic002G339000 Sobic002G339000 Sobic001G256700--Sobic002G339000 Sobic001G256700--Sobic001G330100 Sobic001G195200 Sobic001G195200 Sobic001G256700--Sobic001G195200 Sobic007G036900--Sobic004G004500 Sobic007G036900--Sobic008G187001 Sobic004G229800 Sobic004G229800 Sobic007G036900--Sobic004G229800 Sobic007G036900--Sobic001G256700 Sobic004G141200 Sobic004G141200 Sobic007G036900--Sobic004G141200 Sobic007G036900--Sobic002G339000 Sobic003G364600 Sobic003G364600 Sobic007G036900--Sobic003G364600 Sobic001G108200 Sobic001G108200 Sobic007G036900--Sobic001G108200 Sobic001G079300 Sobic001G079300 Sobic007G036900--Sobic001G079300 Sobic004G243100 Sobic004G243100 Sobic009G224100--Sobic004G243100 Sobic002G139400 Sobic002G139400 Sobic009G224100--Sobic002G139400 Sobic002G184200 Sobic002G184200 Sobic009G224100--Sobic002G184200 Sobic009G224100--Sobic008G187001 Sobic007G155200 Sobic007G155200 Sobic009G224100--Sobic007G155200 Sobic001G423800 Sobic001G423800 Sobic009G224100--Sobic001G423800 Sobic009G224100--Sobic002G388900 Sobic001G192200 Sobic001G192200 Sobic009G224100--Sobic001G192200 Sobic009G224100--Sobic001G330100 Sobic004G219800--Sobic001G256700 Sobic004G219800--Sobic001G330100 Sobic004G219800--Sobic004G352000 Sobic001G330400 Sobic001G330400 Sobic004G219800--Sobic001G330400 Sobic004G219800--Sobic009G032000 Sobic004G219800--Sobic008G187001 Sobic004G219800--Sobic002G388900 Sobic007G017500 Sobic007G017500 Sobic004G219800--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic004G219800--Sobic006G075400 Sobic009G032000--Sobic001G256700 Sobic009G032000--Sobic002G388900 Sobic009G032000--Sobic004G219800 Sobic002G358300 Sobic002G358300 Sobic009G032000--Sobic002G358300 Sobic009G032000--Sobic004G308900 Sobic004G246600 Sobic004G246600 Sobic009G032000--Sobic004G246600 Sobic009G032000--Sobic001G330100 Sobic005G013500 Sobic005G013500 Sobic009G032000--Sobic005G013500 Sobic009G032000--Sobic002G395300 Sobic001G330200 Sobic001G330200 Sobic001G330100--Sobic001G330200 Sobic001G330100--Sobic009G144700 Sobic001G330100--Sobic002G388900 Sobic001G330100--Sobic001G256700 Sobic001G330100--Sobic004G219800 Sobic001G330100--Sobic002G395300 Sobic004G108200 Sobic004G108200 Sobic001G330100--Sobic004G108200 Sobic001G330100--Sobic004G352000 Sobic001G330100--Sobic004G294400 Sobic004G191400 Sobic004G191400 Sobic009G122400--Sobic004G191400 Sobic010G209200 Sobic010G209200 Sobic009G122400--Sobic010G209200 Sobic004G191300 Sobic004G191300 Sobic009G122400--Sobic004G191300 Sobic003G428700 Sobic003G428700 Sobic009G122400--Sobic003G428700 Sobic003G228900 Sobic003G228900 Sobic009G122400--Sobic003G228900 Sobic009G122400--Sobic001G079300 Sobic009G122400--Sobic001G330400 Sobic009G122400--Sobic001G256700 Sobic009G122400--Sobic002G388900 Sobic003G370600 Sobic003G370600 Sobic004G352000--Sobic003G370600 Sobic004G352000--Sobic009G144700 Sobic004G352000--Sobic004G219800 Sobic004G352000--Sobic001G256700 Sobic004G352000--Sobic001G330100 Sobic004G352000--Sobic002G388900 Sobic004G352000--Sobic004G108200 Sobic004G352000--Sobic009G032000 Sobic004G352000--Sobic008G187001
Octagon: transcription factors


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