Gene annotation
Transcriptome id Sobic.004G097100.1
Synonym Sb04g007990
Functional annotation F-box family protein, putative, expressed
UniProt C5XYG7
Pfam PF14476
Panther DB PTHR33358 PTHR33358:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G22030 : F-box family protein with a domain of unknown function (DUF295)
RAP-DB (Rice) LOC_Os02g13220.1 : F-box family protein, putative, expressed
MaizeGDB (Corn) Zm00025a020140 , Zm00025a020139 , Zm00025a034539
Brachypodium KQJ94094 , KQJ94095 , KQJ94096
Barley HORVU7Hr1G022340.1 , HORVU6Hr1G019870.1 , HORVU6Hr1G030350.1 , HORVU7Hr1G038560.4 , HORVU6Hr1G019800.1 , HORVU7Hr1G038560.3 , HORVU7Hr1G038560.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G230100 expressed protein -
2 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
3 Sobic.004G246600 expressed protein -
4 Sobic.006G187900 "Significantly enhanced the expression levels by drought stress, decreased markedly by silicon application"(PubMedID : 24813726)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
5 Sobic.009G241801 - -
6 Sobic.005G013500 WRKY52, expressed -
7 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
8 Sobic.004G308900 AP2 domain containing protein, expressed -
9 Sobic.002G184300 heat shock protein DnaJ, putative, expressed -
10 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.009G194400 expressed protein -
12 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
13 Sobic.002G358300 expressed protein -
14 Sobic.009G183900 ICE-like protease p20 domain containing protein, putative, expressed -
15 Sobic.002G269100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
16 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -
17 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.009G144700 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
20 Sobic.001G100501 - -


Gene co-expression network
sample Sobic004G097100 Sobic004G097100 Sobic003G230100 Sobic003G230100 Sobic004G097100--Sobic003G230100 Sobic004G229500 Sobic004G229500 Sobic004G097100--Sobic004G229500 Sobic004G246600 Sobic004G246600 Sobic004G097100--Sobic004G246600 Sobic006G187900 Sobic006G187900 Sobic004G097100--Sobic006G187900 Sobic009G241801 Sobic009G241801 Sobic004G097100--Sobic009G241801 Sobic005G013500 Sobic005G013500 Sobic004G097100--Sobic005G013500 Sobic002G388900 Sobic002G388900 Sobic004G097100--Sobic002G388900 Sobic004G308900 Sobic004G308900 Sobic004G097100--Sobic004G308900 Sobic002G184300 Sobic002G184300 Sobic004G097100--Sobic002G184300 Sobic003G230100--Sobic004G097100 Sobic003G230100--Sobic002G184300 Sobic004G219800 Sobic004G219800 Sobic003G230100--Sobic004G219800 Sobic002G395300 Sobic002G395300 Sobic003G230100--Sobic002G395300 Sobic006G216700 Sobic006G216700 Sobic003G230100--Sobic006G216700 Sobic004G169200 Sobic004G169200 Sobic003G230100--Sobic004G169200 Sobic009G032000 Sobic009G032000 Sobic003G230100--Sobic009G032000 Sobic002G358300 Sobic002G358300 Sobic003G230100--Sobic002G358300 Sobic002G220000 Sobic002G220000 Sobic003G230100--Sobic002G220000 Sobic004G229500--Sobic004G246600 Sobic004G229500--Sobic005G013500 Sobic004G229500--Sobic004G097100 Sobic003G427800 Sobic003G427800 Sobic004G229500--Sobic003G427800 Sobic004G229500--Sobic009G032000 Sobic004G229500--Sobic004G308900 Sobic009G183900 Sobic009G183900 Sobic004G229500--Sobic009G183900 Sobic009G205500 Sobic009G205500 Sobic004G229500--Sobic009G205500 Sobic004G229500--Sobic002G184300 Sobic004G246600--Sobic004G229500 Sobic004G246600--Sobic009G032000 Sobic004G246600--Sobic004G308900 Sobic004G246600--Sobic005G013500 Sobic004G246600--Sobic002G358300 Sobic004G246600--Sobic004G097100 Sobic001G143100 Sobic001G143100 Sobic004G246600--Sobic001G143100 Sobic002G269100 Sobic002G269100 Sobic004G246600--Sobic002G269100 Sobic004G246600--Sobic002G184300 Sobic006G187900--Sobic004G097100 Sobic006G187900--Sobic004G229500 Sobic006G187900--Sobic005G013500 Sobic006G187900--Sobic004G246600 Sobic006G187900--Sobic002G269100 Sobic001G035100 Sobic001G035100 Sobic006G187900--Sobic001G035100 Sobic006G187900--Sobic009G183900 Sobic004G295600 Sobic004G295600 Sobic006G187900--Sobic004G295600 Sobic006G187900--Sobic002G184300 Sobic009G241801--Sobic002G388900 Sobic001G330100 Sobic001G330100 Sobic009G241801--Sobic001G330100 Sobic008G187001 Sobic008G187001 Sobic009G241801--Sobic008G187001 Sobic009G241801--Sobic004G097100 Sobic009G144700 Sobic009G144700 Sobic009G241801--Sobic009G144700 Sobic001G256700 Sobic001G256700 Sobic009G241801--Sobic001G256700 Sobic009G241801--Sobic004G219800 Sobic009G241801--Sobic009G032000 Sobic009G241801--Sobic004G308900 Sobic005G013500--Sobic004G229500 Sobic005G013500--Sobic009G183900 Sobic005G013500--Sobic004G246600 Sobic005G013500--Sobic009G032000 Sobic005G013500--Sobic009G144700 Sobic005G013500--Sobic004G097100 Sobic001G363400 Sobic001G363400 Sobic005G013500--Sobic001G363400 Sobic004G294400 Sobic004G294400 Sobic005G013500--Sobic004G294400 Sobic004G108200 Sobic004G108200 Sobic005G013500--Sobic004G108200 Sobic002G388900--Sobic008G187001 Sobic002G388900--Sobic001G256700 Sobic002G388900--Sobic009G144700 Sobic002G388900--Sobic001G330100 Sobic002G388900--Sobic009G241801 Sobic002G388900--Sobic009G032000 Sobic004G352000 Sobic004G352000 Sobic002G388900--Sobic004G352000 Sobic002G388900--Sobic004G219800 Sobic002G388900--Sobic004G308900 Sobic004G308900--Sobic002G358300 Sobic007G122800 Sobic007G122800 Sobic004G308900--Sobic007G122800 Sobic001G195200 Sobic001G195200 Sobic004G308900--Sobic001G195200 Sobic004G308900--Sobic001G256700 Sobic004G191400 Sobic004G191400 Sobic004G308900--Sobic004G191400 Sobic004G308900--Sobic009G032000 Sobic004G308900--Sobic004G246600 Sobic004G308900--Sobic002G388900 Sobic004G191300 Sobic004G191300 Sobic004G308900--Sobic004G191300 Sobic002G184300--Sobic001G363400 Sobic002G184300--Sobic003G230100 Sobic002G184300--Sobic002G358300 Sobic002G184300--Sobic004G097100 Sobic002G184300--Sobic009G032000 Sobic002G184300--Sobic009G205500 Sobic002G184300--Sobic004G246600 Sobic002G184300--Sobic005G013500 Sobic002G184300--Sobic004G308900
Octagon: transcription factors


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