Gene annotation
Transcriptome id Sobic.001G100501.1
Synonym -
Functional annotation -
UniProt A0A1Z5S536
Pfam -
Panther DB PTHR33983 PTHR33983:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57450 : -
RAP-DB (Rice) LOC_Os03g52410.1 : expressed protein
MaizeGDB (Corn) Zm00025a016868
Brachypodium KQK13350
Barley HORVU4Hr1G010770.5 , HORVU4Hr1G010770.4 , HORVU4Hr1G010770.7 , HORVU4Hr1G010770.6 , HORVU4Hr1G010770.1 , HORVU4Hr1G010770.3 , HORVU4Hr1G010770.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G097100 F-box family protein, putative, expressed -
2 Sobic.003G207900 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
3 Sobic.003G230100 expressed protein -
4 Sobic.002G269100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
5 Sobic.006G216700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@expressed protein -
6 Sobic.001G295700 Triacylglycerol lipase like protein (Os)(PubMedID : 27208977)@triacylglycerol lipase like protein, putative, expressed -
7 Sobic.002G225700 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
8 Sobic.009G136400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha/beta hydrolase fold, putative, expressed -
9 Sobic.001G138200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl transferase 8 domain containing protein, putative, expressed -
10 Sobic.007G118301 - -
11 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
12 Sobic.009G194400 expressed protein -
13 Sobic.007G122500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G370600 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
15 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
16 Sobic.004G246600 expressed protein -
17 Sobic.009G241801 - -
18 Sobic.002G250900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.001G143100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
20 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic001G100501 Sobic001G100501 Sobic004G097100 Sobic004G097100 Sobic001G100501--Sobic004G097100 Sobic003G207900 Sobic003G207900 Sobic001G100501--Sobic003G207900 Sobic003G230100 Sobic003G230100 Sobic001G100501--Sobic003G230100 Sobic002G269100 Sobic002G269100 Sobic001G100501--Sobic002G269100 Sobic006G216700 Sobic006G216700 Sobic001G100501--Sobic006G216700 Sobic001G295700 Sobic001G295700 Sobic001G100501--Sobic001G295700 Sobic002G225700 Sobic002G225700 Sobic001G100501--Sobic002G225700 Sobic009G136400 Sobic009G136400 Sobic001G100501--Sobic009G136400 Sobic001G138200 Sobic001G138200 Sobic001G100501--Sobic001G138200 Sobic004G097100--Sobic003G230100 Sobic004G229500 Sobic004G229500 Sobic004G097100--Sobic004G229500 Sobic004G246600 Sobic004G246600 Sobic004G097100--Sobic004G246600 Sobic006G187900 Sobic006G187900 Sobic004G097100--Sobic006G187900 Sobic009G241801 Sobic009G241801 Sobic004G097100--Sobic009G241801 Sobic005G013500 Sobic005G013500 Sobic004G097100--Sobic005G013500 Sobic002G388900 Sobic002G388900 Sobic004G097100--Sobic002G388900 Sobic004G308900 Sobic004G308900 Sobic004G097100--Sobic004G308900 Sobic002G184300 Sobic002G184300 Sobic004G097100--Sobic002G184300 Sobic003G207900--Sobic001G100501 Sobic006G170000 Sobic006G170000 Sobic003G207900--Sobic006G170000 Sobic003G207900--Sobic001G295700 Sobic004G092800 Sobic004G092800 Sobic003G207900--Sobic004G092800 Sobic003G370600 Sobic003G370600 Sobic003G207900--Sobic003G370600 Sobic003G207900--Sobic001G138200 Sobic003G207900--Sobic004G097100 Sobic003G207900--Sobic009G136400 Sobic007G118301 Sobic007G118301 Sobic003G207900--Sobic007G118301 Sobic003G230100--Sobic004G097100 Sobic003G230100--Sobic002G184300 Sobic004G219800 Sobic004G219800 Sobic003G230100--Sobic004G219800 Sobic002G395300 Sobic002G395300 Sobic003G230100--Sobic002G395300 Sobic003G230100--Sobic006G216700 Sobic004G169200 Sobic004G169200 Sobic003G230100--Sobic004G169200 Sobic009G032000 Sobic009G032000 Sobic003G230100--Sobic009G032000 Sobic002G358300 Sobic002G358300 Sobic003G230100--Sobic002G358300 Sobic002G220000 Sobic002G220000 Sobic003G230100--Sobic002G220000 Sobic001G143100 Sobic001G143100 Sobic002G269100--Sobic001G143100 Sobic002G269100--Sobic004G246600 Sobic004G295600 Sobic004G295600 Sobic002G269100--Sobic004G295600 Sobic002G269100--Sobic004G097100 Sobic002G269100--Sobic004G308900 Sobic002G269100--Sobic002G358300 Sobic009G194400 Sobic009G194400 Sobic002G269100--Sobic009G194400 Sobic002G269100--Sobic004G229500 Sobic002G269100--Sobic006G187900 Sobic006G216700--Sobic003G230100 Sobic006G216700--Sobic004G169200 Sobic001G449700 Sobic001G449700 Sobic006G216700--Sobic001G449700 Sobic006G216700--Sobic002G395300 Sobic006G216700--Sobic001G100501 Sobic006G216700--Sobic004G097100 Sobic003G037500 Sobic003G037500 Sobic006G216700--Sobic003G037500 Sobic006G216700--Sobic004G219800 Sobic003G349600 Sobic003G349600 Sobic006G216700--Sobic003G349600 Sobic001G295700--Sobic002G358300 Sobic001G259700 Sobic001G259700 Sobic001G295700--Sobic001G259700 Sobic001G295700--Sobic002G269100 Sobic001G295700--Sobic004G308900 Sobic001G295700--Sobic004G097100 Sobic001G295700--Sobic001G100501 Sobic001G295700--Sobic002G395300 Sobic001G295700--Sobic004G169200 Sobic001G295700--Sobic003G230100 Sobic002G225700--Sobic001G100501 Sobic007G122500 Sobic007G122500 Sobic002G225700--Sobic007G122500 Sobic010G104300 Sobic010G104300 Sobic002G225700--Sobic010G104300 Sobic006G163401 Sobic006G163401 Sobic002G225700--Sobic006G163401 Sobic002G225700--Sobic002G269100 Sobic002G225700--Sobic004G295600 Sobic002G225700--Sobic001G138200 Sobic002G388800 Sobic002G388800 Sobic002G225700--Sobic002G388800 Sobic006G000800 Sobic006G000800 Sobic002G225700--Sobic006G000800 Sobic009G136400--Sobic001G100501 Sobic009G136400--Sobic007G118301 Sobic009G136400--Sobic001G449700 Sobic009G136400--Sobic002G225700 Sobic009G136400--Sobic006G216700 Sobic009G136400--Sobic001G295700 Sobic009G136400--Sobic001G259700 Sobic009G136400--Sobic003G207900 Sobic001G077600 Sobic001G077600 Sobic009G136400--Sobic001G077600 Sobic001G138200--Sobic002G269100 Sobic001G138200--Sobic001G100501 Sobic001G138200--Sobic002G388800 Sobic001G138200--Sobic002G225700 Sobic001G138200--Sobic004G246600 Sobic001G138200--Sobic001G295700 Sobic001G138200--Sobic004G097100 Sobic001G138200--Sobic003G207900 Sobic001G138200--Sobic001G143100
Octagon: transcription factors


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