Gene annotation
Transcriptome id Sobic.007G118301.1
Synonym -
Functional annotation -
UniProt A0A1Z5RAB5
Pfam PF03106
Panther DB PTHR32096 PTHR32096:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G11070 : WRKY family transcription factor
RAP-DB (Rice) LOC_Os08g29660.1 : WRKY69, expressed
MaizeGDB (Corn) Zm00025a030972 , Zm00025a006015
Brachypodium KQK04778 , KQK04775 , KQJ98088
Barley HORVU1Hr1G090190.1 , HORVU1Hr1G090190.2 , HORVU1Hr1G090190.3 , HORVU1Hr1G090190.4 , HORVU1Hr1G090190.5 , HORVU1Hr1G090190.6 , HORVU1Hr1G090190.7 , HORVU1Hr1G090190.8 , HORVU6Hr1G013890.3 , HORVU6Hr1G013890.2 , HORVU1Hr1G090130.4 , HORVU1Hr1G090110.1 , HORVU1Hr1G090130.6 , HORVU1Hr1G090130.2 , HORVU1Hr1G090130.3
Wheat TraesCS2D02G168600 , TraesCS6A02G080500 , TraesCS6B02G108000 , TraesCS6D02G074200 , TraesCS2B02G187500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G100501 - -
2 Sobic.009G136400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha/beta hydrolase fold, putative, expressed -
3 Sobic.006G259000 AP2 domain containing protein, expressed K09286: EREBP-like factor
4 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.003G207900 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
6 Sobic.006G216700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@expressed protein -
7 Sobic.001G295700 Triacylglycerol lipase like protein (Os)(PubMedID : 27208977)@triacylglycerol lipase like protein, putative, expressed -
8 Sobic.010G105300 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
9 Sobic.003G230100 expressed protein -
10 Sobic.004G297100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
11 Sobic.010G102000 U-box protein CMPG1, putative, expressed -
12 Sobic.001G138200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl transferase 8 domain containing protein, putative, expressed -
13 Sobic.001G489500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.010G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G232800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
16 Sobic.003G416500 SRC2 protein, putative, expressed -
17 Sobic.002G225700 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
18 Sobic.001G088300 - -
19 Sobic.010G071000 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.010G234000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -


Gene co-expression network
sample Sobic007G118301 Sobic007G118301 Sobic001G100501 Sobic001G100501 Sobic007G118301--Sobic001G100501 Sobic009G136400 Sobic009G136400 Sobic007G118301--Sobic009G136400 Sobic006G259000 Sobic006G259000 Sobic007G118301--Sobic006G259000 Sobic001G195100 Sobic001G195100 Sobic007G118301--Sobic001G195100 Sobic003G207900 Sobic003G207900 Sobic007G118301--Sobic003G207900 Sobic006G216700 Sobic006G216700 Sobic007G118301--Sobic006G216700 Sobic001G295700 Sobic001G295700 Sobic007G118301--Sobic001G295700 Sobic010G105300 Sobic010G105300 Sobic007G118301--Sobic010G105300 Sobic003G230100 Sobic003G230100 Sobic007G118301--Sobic003G230100 Sobic004G097100 Sobic004G097100 Sobic001G100501--Sobic004G097100 Sobic001G100501--Sobic003G207900 Sobic001G100501--Sobic003G230100 Sobic002G269100 Sobic002G269100 Sobic001G100501--Sobic002G269100 Sobic001G100501--Sobic006G216700 Sobic001G100501--Sobic001G295700 Sobic002G225700 Sobic002G225700 Sobic001G100501--Sobic002G225700 Sobic001G100501--Sobic009G136400 Sobic001G138200 Sobic001G138200 Sobic001G100501--Sobic001G138200 Sobic009G136400--Sobic001G100501 Sobic009G136400--Sobic007G118301 Sobic001G449700 Sobic001G449700 Sobic009G136400--Sobic001G449700 Sobic009G136400--Sobic002G225700 Sobic009G136400--Sobic006G216700 Sobic009G136400--Sobic001G295700 Sobic001G259700 Sobic001G259700 Sobic009G136400--Sobic001G259700 Sobic009G136400--Sobic003G207900 Sobic001G077600 Sobic001G077600 Sobic009G136400--Sobic001G077600 Sobic003G416500 Sobic003G416500 Sobic006G259000--Sobic003G416500 Sobic002G323900 Sobic002G323900 Sobic006G259000--Sobic002G323900 Sobic010G023200 Sobic010G023200 Sobic006G259000--Sobic010G023200 Sobic007G077100 Sobic007G077100 Sobic006G259000--Sobic007G077100 Sobic006G259000--Sobic010G105300 Sobic001G064900 Sobic001G064900 Sobic006G259000--Sobic001G064900 Sobic001G489500 Sobic001G489500 Sobic006G259000--Sobic001G489500 Sobic004G086800 Sobic004G086800 Sobic006G259000--Sobic004G086800 Sobic009G217500 Sobic009G217500 Sobic006G259000--Sobic009G217500 Sobic001G314800 Sobic001G314800 Sobic001G195100--Sobic001G314800 Sobic003G102200 Sobic003G102200 Sobic001G195100--Sobic003G102200 Sobic004G297100 Sobic004G297100 Sobic001G195100--Sobic004G297100 Sobic001G059400 Sobic001G059400 Sobic001G195100--Sobic001G059400 Sobic001G195100--Sobic007G118301 Sobic007G090300 Sobic007G090300 Sobic001G195100--Sobic007G090300 Sobic005G109000 Sobic005G109000 Sobic001G195100--Sobic005G109000 Sobic001G088300 Sobic001G088300 Sobic001G195100--Sobic001G088300 Sobic003G296300 Sobic003G296300 Sobic001G195100--Sobic003G296300 Sobic003G207900--Sobic001G100501 Sobic006G170000 Sobic006G170000 Sobic003G207900--Sobic006G170000 Sobic003G207900--Sobic001G295700 Sobic004G092800 Sobic004G092800 Sobic003G207900--Sobic004G092800 Sobic003G370600 Sobic003G370600 Sobic003G207900--Sobic003G370600 Sobic003G207900--Sobic001G138200 Sobic003G207900--Sobic004G097100 Sobic003G207900--Sobic009G136400 Sobic003G207900--Sobic007G118301 Sobic006G216700--Sobic003G230100 Sobic004G169200 Sobic004G169200 Sobic006G216700--Sobic004G169200 Sobic006G216700--Sobic001G449700 Sobic002G395300 Sobic002G395300 Sobic006G216700--Sobic002G395300 Sobic006G216700--Sobic001G100501 Sobic006G216700--Sobic004G097100 Sobic003G037500 Sobic003G037500 Sobic006G216700--Sobic003G037500 Sobic004G219800 Sobic004G219800 Sobic006G216700--Sobic004G219800 Sobic003G349600 Sobic003G349600 Sobic006G216700--Sobic003G349600 Sobic002G358300 Sobic002G358300 Sobic001G295700--Sobic002G358300 Sobic001G295700--Sobic001G259700 Sobic001G295700--Sobic002G269100 Sobic004G308900 Sobic004G308900 Sobic001G295700--Sobic004G308900 Sobic001G295700--Sobic004G097100 Sobic001G295700--Sobic001G100501 Sobic001G295700--Sobic002G395300 Sobic001G295700--Sobic004G169200 Sobic001G295700--Sobic003G230100 Sobic010G102000 Sobic010G102000 Sobic010G105300--Sobic010G102000 Sobic010G105300--Sobic006G259000 Sobic010G105300--Sobic003G416500 Sobic010G105300--Sobic010G023200 Sobic010G105300--Sobic009G217500 Sobic010G105300--Sobic007G077100 Sobic010G105300--Sobic001G489500 Sobic010G105300--Sobic001G064900 Sobic002G341900 Sobic002G341900 Sobic010G105300--Sobic002G341900 Sobic003G230100--Sobic004G097100 Sobic002G184300 Sobic002G184300 Sobic003G230100--Sobic002G184300 Sobic003G230100--Sobic004G219800 Sobic003G230100--Sobic002G395300 Sobic003G230100--Sobic006G216700 Sobic003G230100--Sobic004G169200 Sobic009G032000 Sobic009G032000 Sobic003G230100--Sobic009G032000 Sobic003G230100--Sobic002G358300 Sobic002G220000 Sobic002G220000 Sobic003G230100--Sobic002G220000
Octagon: transcription factors


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