Gene annotation
Transcriptome id Sobic.006G216700.1
Synonym SbSAUR47, small auxin up RNA, Sb06g028660
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
expressed protein
UniProt A0A1Z5RF14
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT4G00880 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os01g56240.1 : OsSAUR2 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a009767 , Zm00025a009763
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G230100 expressed protein -
2 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
3 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
4 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
5 Sobic.001G100501 - -
6 Sobic.004G097100 F-box family protein, putative, expressed -
7 Sobic.003G037500 WRKY107, expressed -
8 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.003G349600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-14 - C2H2 zinc finger protein, expressed -
10 Sobic.001G481100 DUF581 domain containing protein, expressed -
11 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
12 Sobic.002G220000 expressed protein -
13 Sobic.003G144800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.002G328400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lc.15 - DUF26 kinases have homology to DUF26 containing loci, expressed -
15 Sobic.001G330200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS3-12 - C2H2 zinc finger protein, expressed -
16 Sobic.001G383700 OsCML27 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
17 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
18 Sobic.009G224200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.001G050100 Cupin domain containing protein, expressed -
20 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -


Gene co-expression network
sample Sobic006G216700 Sobic006G216700 Sobic003G230100 Sobic003G230100 Sobic006G216700--Sobic003G230100 Sobic004G169200 Sobic004G169200 Sobic006G216700--Sobic004G169200 Sobic001G449700 Sobic001G449700 Sobic006G216700--Sobic001G449700 Sobic002G395300 Sobic002G395300 Sobic006G216700--Sobic002G395300 Sobic001G100501 Sobic001G100501 Sobic006G216700--Sobic001G100501 Sobic004G097100 Sobic004G097100 Sobic006G216700--Sobic004G097100 Sobic003G037500 Sobic003G037500 Sobic006G216700--Sobic003G037500 Sobic004G219800 Sobic004G219800 Sobic006G216700--Sobic004G219800 Sobic003G349600 Sobic003G349600 Sobic006G216700--Sobic003G349600 Sobic003G230100--Sobic004G097100 Sobic002G184300 Sobic002G184300 Sobic003G230100--Sobic002G184300 Sobic003G230100--Sobic004G219800 Sobic003G230100--Sobic002G395300 Sobic003G230100--Sobic006G216700 Sobic003G230100--Sobic004G169200 Sobic009G032000 Sobic009G032000 Sobic003G230100--Sobic009G032000 Sobic002G358300 Sobic002G358300 Sobic003G230100--Sobic002G358300 Sobic002G220000 Sobic002G220000 Sobic003G230100--Sobic002G220000 Sobic004G169200--Sobic002G395300 Sobic004G169200--Sobic002G358300 Sobic003G428700 Sobic003G428700 Sobic004G169200--Sobic003G428700 Sobic006G263600 Sobic006G263600 Sobic004G169200--Sobic006G263600 Sobic004G191400 Sobic004G191400 Sobic004G169200--Sobic004G191400 Sobic009G122400 Sobic009G122400 Sobic004G169200--Sobic009G122400 Sobic010G209200 Sobic010G209200 Sobic004G169200--Sobic010G209200 Sobic004G169200--Sobic002G220000 Sobic002G339000 Sobic002G339000 Sobic004G169200--Sobic002G339000 Sobic001G383700 Sobic001G383700 Sobic001G449700--Sobic001G383700 Sobic003G202200 Sobic003G202200 Sobic001G449700--Sobic003G202200 Sobic003G110200 Sobic003G110200 Sobic001G449700--Sobic003G110200 Sobic007G149300 Sobic007G149300 Sobic001G449700--Sobic007G149300 Sobic003G021500 Sobic003G021500 Sobic001G449700--Sobic003G021500 Sobic009G036000 Sobic009G036000 Sobic001G449700--Sobic009G036000 Sobic002G333400 Sobic002G333400 Sobic001G449700--Sobic002G333400 Sobic001G259700 Sobic001G259700 Sobic001G449700--Sobic001G259700 Sobic005G186100 Sobic005G186100 Sobic001G449700--Sobic005G186100 Sobic001G256700 Sobic001G256700 Sobic002G395300--Sobic001G256700 Sobic001G330100 Sobic001G330100 Sobic002G395300--Sobic001G330100 Sobic002G395300--Sobic004G169200 Sobic004G294400 Sobic004G294400 Sobic002G395300--Sobic004G294400 Sobic002G388900 Sobic002G388900 Sobic002G395300--Sobic002G388900 Sobic004G108200 Sobic004G108200 Sobic002G395300--Sobic004G108200 Sobic001G195200 Sobic001G195200 Sobic002G395300--Sobic001G195200 Sobic009G144700 Sobic009G144700 Sobic002G395300--Sobic009G144700 Sobic002G395300--Sobic009G032000 Sobic001G100501--Sobic004G097100 Sobic003G207900 Sobic003G207900 Sobic001G100501--Sobic003G207900 Sobic001G100501--Sobic003G230100 Sobic002G269100 Sobic002G269100 Sobic001G100501--Sobic002G269100 Sobic001G100501--Sobic006G216700 Sobic001G295700 Sobic001G295700 Sobic001G100501--Sobic001G295700 Sobic002G225700 Sobic002G225700 Sobic001G100501--Sobic002G225700 Sobic009G136400 Sobic009G136400 Sobic001G100501--Sobic009G136400 Sobic001G138200 Sobic001G138200 Sobic001G100501--Sobic001G138200 Sobic004G097100--Sobic003G230100 Sobic004G229500 Sobic004G229500 Sobic004G097100--Sobic004G229500 Sobic004G246600 Sobic004G246600 Sobic004G097100--Sobic004G246600 Sobic006G187900 Sobic006G187900 Sobic004G097100--Sobic006G187900 Sobic009G241801 Sobic009G241801 Sobic004G097100--Sobic009G241801 Sobic005G013500 Sobic005G013500 Sobic004G097100--Sobic005G013500 Sobic004G097100--Sobic002G388900 Sobic004G308900 Sobic004G308900 Sobic004G097100--Sobic004G308900 Sobic004G097100--Sobic002G184300 Sobic003G285500 Sobic003G285500 Sobic003G037500--Sobic003G285500 Sobic003G192100 Sobic003G192100 Sobic003G037500--Sobic003G192100 Sobic001G367600 Sobic001G367600 Sobic003G037500--Sobic001G367600 Sobic001G231700 Sobic001G231700 Sobic003G037500--Sobic001G231700 Sobic004G245100 Sobic004G245100 Sobic003G037500--Sobic004G245100 Sobic002G353900 Sobic002G353900 Sobic003G037500--Sobic002G353900 Sobic003G228200 Sobic003G228200 Sobic003G037500--Sobic003G228200 Sobic007G155000 Sobic007G155000 Sobic003G037500--Sobic007G155000 Sobic001G304100 Sobic001G304100 Sobic003G037500--Sobic001G304100 Sobic004G219800--Sobic001G256700 Sobic004G219800--Sobic001G330100 Sobic004G352000 Sobic004G352000 Sobic004G219800--Sobic004G352000 Sobic001G330400 Sobic001G330400 Sobic004G219800--Sobic001G330400 Sobic004G219800--Sobic009G032000 Sobic008G187001 Sobic008G187001 Sobic004G219800--Sobic008G187001 Sobic004G219800--Sobic002G388900 Sobic007G017500 Sobic007G017500 Sobic004G219800--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic004G219800--Sobic006G075400 Sobic004G243100 Sobic004G243100 Sobic003G349600--Sobic004G243100 Sobic009G224100 Sobic009G224100 Sobic003G349600--Sobic009G224100 Sobic003G349600--Sobic001G330100 Sobic007G155200 Sobic007G155200 Sobic003G349600--Sobic007G155200 Sobic002G140400 Sobic002G140400 Sobic003G349600--Sobic002G140400 Sobic003G349600--Sobic008G187001 Sobic007G036900 Sobic007G036900 Sobic003G349600--Sobic007G036900 Sobic002G139400 Sobic002G139400 Sobic003G349600--Sobic002G139400 Sobic002G263400 Sobic002G263400 Sobic003G349600--Sobic002G263400
Octagon: transcription factors


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