Gene annotation
Transcriptome id Sobic.009G224200.1
Synonym Sb09g027770
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YV32
Pfam PF14009
Panther DB PTHR33052 PTHR33052:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G03280 : -
RAP-DB (Rice) LOC_Os05g47960.1 : expressed protein
MaizeGDB (Corn) Zm00025a036541
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G230100 expressed protein -
2 Sobic.006G263600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
4 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
5 Sobic.004G191400 - -
6 Sobic.002G358300 expressed protein -
7 Sobic.001G079300 helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.006G216700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@expressed protein -
9 Sobic.001G431500 gibberellin receptor GID1L2, putative, expressed -
10 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.007G122800 expressed protein -
12 Sobic.001G259700 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
13 Sobic.005G021800 harpin-induced protein 1 domain containing protein, expressed -
14 Sobic.003G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.002G220000 expressed protein -
16 Sobic.004G308900 AP2 domain containing protein, expressed -
17 Sobic.009G122400 expressed protein -
18 Sobic.002G328400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lc.15 - DUF26 kinases have homology to DUF26 containing loci, expressed -
19 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
20 Sobic.004G191300 - -


Gene co-expression network
sample Sobic009G224200 Sobic009G224200 Sobic003G230100 Sobic003G230100 Sobic009G224200--Sobic003G230100 Sobic006G263600 Sobic006G263600 Sobic009G224200--Sobic006G263600 Sobic004G169200 Sobic004G169200 Sobic009G224200--Sobic004G169200 Sobic002G395300 Sobic002G395300 Sobic009G224200--Sobic002G395300 Sobic004G191400 Sobic004G191400 Sobic009G224200--Sobic004G191400 Sobic002G358300 Sobic002G358300 Sobic009G224200--Sobic002G358300 Sobic001G079300 Sobic001G079300 Sobic009G224200--Sobic001G079300 Sobic006G216700 Sobic006G216700 Sobic009G224200--Sobic006G216700 Sobic001G431500 Sobic001G431500 Sobic009G224200--Sobic001G431500 Sobic004G097100 Sobic004G097100 Sobic003G230100--Sobic004G097100 Sobic002G184300 Sobic002G184300 Sobic003G230100--Sobic002G184300 Sobic004G219800 Sobic004G219800 Sobic003G230100--Sobic004G219800 Sobic003G230100--Sobic002G395300 Sobic003G230100--Sobic006G216700 Sobic003G230100--Sobic004G169200 Sobic009G032000 Sobic009G032000 Sobic003G230100--Sobic009G032000 Sobic003G230100--Sobic002G358300 Sobic002G220000 Sobic002G220000 Sobic003G230100--Sobic002G220000 Sobic001G259700 Sobic001G259700 Sobic006G263600--Sobic001G259700 Sobic006G263600--Sobic004G169200 Sobic009G247900 Sobic009G247900 Sobic006G263600--Sobic009G247900 Sobic009G036000 Sobic009G036000 Sobic006G263600--Sobic009G036000 Sobic001G383700 Sobic001G383700 Sobic006G263600--Sobic001G383700 Sobic003G324400 Sobic003G324400 Sobic006G263600--Sobic003G324400 Sobic007G213800 Sobic007G213800 Sobic006G263600--Sobic007G213800 Sobic006G263600--Sobic001G079300 Sobic002G282300 Sobic002G282300 Sobic006G263600--Sobic002G282300 Sobic004G169200--Sobic002G395300 Sobic004G169200--Sobic002G358300 Sobic003G428700 Sobic003G428700 Sobic004G169200--Sobic003G428700 Sobic004G169200--Sobic006G263600 Sobic004G169200--Sobic004G191400 Sobic009G122400 Sobic009G122400 Sobic004G169200--Sobic009G122400 Sobic010G209200 Sobic010G209200 Sobic004G169200--Sobic010G209200 Sobic004G169200--Sobic002G220000 Sobic002G339000 Sobic002G339000 Sobic004G169200--Sobic002G339000 Sobic001G256700 Sobic001G256700 Sobic002G395300--Sobic001G256700 Sobic001G330100 Sobic001G330100 Sobic002G395300--Sobic001G330100 Sobic002G395300--Sobic004G169200 Sobic004G294400 Sobic004G294400 Sobic002G395300--Sobic004G294400 Sobic002G388900 Sobic002G388900 Sobic002G395300--Sobic002G388900 Sobic004G108200 Sobic004G108200 Sobic002G395300--Sobic004G108200 Sobic001G195200 Sobic001G195200 Sobic002G395300--Sobic001G195200 Sobic009G144700 Sobic009G144700 Sobic002G395300--Sobic009G144700 Sobic002G395300--Sobic009G032000 Sobic004G191300 Sobic004G191300 Sobic004G191400--Sobic004G191300 Sobic004G191400--Sobic001G079300 Sobic004G191400--Sobic009G122400 Sobic004G191400--Sobic010G209200 Sobic007G122800 Sobic007G122800 Sobic004G191400--Sobic007G122800 Sobic003G228900 Sobic003G228900 Sobic004G191400--Sobic003G228900 Sobic004G308900 Sobic004G308900 Sobic004G191400--Sobic004G308900 Sobic004G191400--Sobic003G428700 Sobic004G191400--Sobic004G294400 Sobic002G358300--Sobic004G308900 Sobic002G358300--Sobic007G122800 Sobic002G358300--Sobic001G195200 Sobic002G358300--Sobic009G032000 Sobic002G358300--Sobic004G191400 Sobic002G358300--Sobic004G169200 Sobic002G358300--Sobic004G191300 Sobic002G358300--Sobic002G395300 Sobic002G358300--Sobic004G294400 Sobic001G079300--Sobic004G191400 Sobic001G079300--Sobic004G191300 Sobic001G079300--Sobic010G209200 Sobic001G079300--Sobic003G228900 Sobic001G138600 Sobic001G138600 Sobic001G079300--Sobic001G138600 Sobic001G079300--Sobic009G122400 Sobic003G260300 Sobic003G260300 Sobic001G079300--Sobic003G260300 Sobic004G141200 Sobic004G141200 Sobic001G079300--Sobic004G141200 Sobic009G184000 Sobic009G184000 Sobic001G079300--Sobic009G184000 Sobic006G216700--Sobic003G230100 Sobic006G216700--Sobic004G169200 Sobic001G449700 Sobic001G449700 Sobic006G216700--Sobic001G449700 Sobic006G216700--Sobic002G395300 Sobic001G100501 Sobic001G100501 Sobic006G216700--Sobic001G100501 Sobic006G216700--Sobic004G097100 Sobic003G037500 Sobic003G037500 Sobic006G216700--Sobic003G037500 Sobic006G216700--Sobic004G219800 Sobic003G349600 Sobic003G349600 Sobic006G216700--Sobic003G349600 Sobic003G265200 Sobic003G265200 Sobic001G431500--Sobic003G265200 Sobic002G328400 Sobic002G328400 Sobic001G431500--Sobic002G328400 Sobic004G315200 Sobic004G315200 Sobic001G431500--Sobic004G315200 Sobic001G431500--Sobic003G260300 Sobic001G431500--Sobic004G191400 Sobic003G093000 Sobic003G093000 Sobic001G431500--Sobic003G093000 Sobic002G189100 Sobic002G189100 Sobic001G431500--Sobic002G189100 Sobic001G431500--Sobic010G209200 Sobic001G431500--Sobic002G220000
Octagon: transcription factors


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