Gene annotation
Transcriptome id Sobic.001G431500.1
Synonym CXE17, AtCXE17, Sb01g040580
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt C5WQT2
Pfam PF12695
Panther DB PTHR23024 PTHR23024:SF93
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G16080 : carboxyesterase 17
RAP-DB (Rice) LOC_Os03g15270.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a001609 , Zm00025a052830
Brachypodium KQK14953 , KQK22496
Barley HORVU4Hr1G062060.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G265200 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
2 Sobic.002G328400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lc.15 - DUF26 kinases have homology to DUF26 containing loci, expressed -
3 Sobic.004G315200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
4 Sobic.003G260300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.004G191400 - -
6 Sobic.003G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
8 Sobic.010G209200 WRKY28, expressed -
9 Sobic.002G220000 expressed protein -
10 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
11 Sobic.006G157500 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
12 Sobic.001G079300 helix-loop-helix DNA-binding domain containing protein, expressed -
13 Sobic.009G122400 expressed protein -
14 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
15 Sobic.009G192600 Protein tyrosine/DOPA decarboxylase 1 (Os)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
16 Sobic.006G263600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.004G191300 - -
19 Sobic.007G122800 expressed protein -
20 Sobic.003G268600 - -


Gene co-expression network
sample Sobic001G431500 Sobic001G431500 Sobic003G265200 Sobic003G265200 Sobic001G431500--Sobic003G265200 Sobic002G328400 Sobic002G328400 Sobic001G431500--Sobic002G328400 Sobic004G315200 Sobic004G315200 Sobic001G431500--Sobic004G315200 Sobic003G260300 Sobic003G260300 Sobic001G431500--Sobic003G260300 Sobic004G191400 Sobic004G191400 Sobic001G431500--Sobic004G191400 Sobic003G093000 Sobic003G093000 Sobic001G431500--Sobic003G093000 Sobic002G189100 Sobic002G189100 Sobic001G431500--Sobic002G189100 Sobic010G209200 Sobic010G209200 Sobic001G431500--Sobic010G209200 Sobic002G220000 Sobic002G220000 Sobic001G431500--Sobic002G220000 Sobic006G157500 Sobic006G157500 Sobic003G265200--Sobic006G157500 Sobic003G265200--Sobic003G260300 Sobic003G265200--Sobic002G328400 Sobic003G265200--Sobic001G431500 Sobic002G336600 Sobic002G336600 Sobic003G265200--Sobic002G336600 Sobic001G259900 Sobic001G259900 Sobic003G265200--Sobic001G259900 Sobic009G184000 Sobic009G184000 Sobic003G265200--Sobic009G184000 Sobic003G228900 Sobic003G228900 Sobic003G265200--Sobic003G228900 Sobic003G043600 Sobic003G043600 Sobic003G265200--Sobic003G043600 Sobic009G141500 Sobic009G141500 Sobic002G328400--Sobic009G141500 Sobic001G259700 Sobic001G259700 Sobic002G328400--Sobic001G259700 Sobic002G328400--Sobic003G265200 Sobic002G328400--Sobic004G191400 Sobic002G328400--Sobic003G260300 Sobic004G169200 Sobic004G169200 Sobic002G328400--Sobic004G169200 Sobic001G079300 Sobic001G079300 Sobic002G328400--Sobic001G079300 Sobic006G263600 Sobic006G263600 Sobic002G328400--Sobic006G263600 Sobic002G328400--Sobic001G431500 Sobic001G330400 Sobic001G330400 Sobic004G315200--Sobic001G330400 Sobic003G269000 Sobic003G269000 Sobic004G315200--Sobic003G269000 Sobic004G315200--Sobic001G431500 Sobic004G315200--Sobic002G220000 Sobic004G064500 Sobic004G064500 Sobic004G315200--Sobic004G064500 Sobic002G063800 Sobic002G063800 Sobic004G315200--Sobic002G063800 Sobic002G184300 Sobic002G184300 Sobic004G315200--Sobic002G184300 Sobic003G268600 Sobic003G268600 Sobic004G315200--Sobic003G268600 Sobic004G315200--Sobic003G093000 Sobic003G260300--Sobic003G228900 Sobic003G260300--Sobic001G079300 Sobic003G260300--Sobic004G191400 Sobic006G075400 Sobic006G075400 Sobic003G260300--Sobic006G075400 Sobic003G432700 Sobic003G432700 Sobic003G260300--Sobic003G432700 Sobic001G502400 Sobic001G502400 Sobic003G260300--Sobic001G502400 Sobic003G260300--Sobic009G184000 Sobic004G191300 Sobic004G191300 Sobic003G260300--Sobic004G191300 Sobic001G195200 Sobic001G195200 Sobic003G260300--Sobic001G195200 Sobic004G191400--Sobic004G191300 Sobic004G191400--Sobic001G079300 Sobic009G122400 Sobic009G122400 Sobic004G191400--Sobic009G122400 Sobic004G191400--Sobic010G209200 Sobic007G122800 Sobic007G122800 Sobic004G191400--Sobic007G122800 Sobic004G191400--Sobic003G228900 Sobic004G308900 Sobic004G308900 Sobic004G191400--Sobic004G308900 Sobic003G428700 Sobic003G428700 Sobic004G191400--Sobic003G428700 Sobic004G294400 Sobic004G294400 Sobic004G191400--Sobic004G294400 Sobic003G093000--Sobic002G220000 Sobic003G092900 Sobic003G092900 Sobic003G093000--Sobic003G092900 Sobic003G093000--Sobic002G189100 Sobic004G222500 Sobic004G222500 Sobic003G093000--Sobic004G222500 Sobic003G093000--Sobic003G428700 Sobic003G093000--Sobic004G191400 Sobic003G093000--Sobic003G228900 Sobic003G093000--Sobic009G122400 Sobic010G259300 Sobic010G259300 Sobic003G093000--Sobic010G259300 Sobic002G189100--Sobic003G228900 Sobic002G189100--Sobic003G093000 Sobic009G192600 Sobic009G192600 Sobic002G189100--Sobic009G192600 Sobic002G189100--Sobic009G184000 Sobic003G142300 Sobic003G142300 Sobic002G189100--Sobic003G142300 Sobic002G189100--Sobic010G209200 Sobic002G189100--Sobic002G220000 Sobic002G189100--Sobic004G191400 Sobic001G267600 Sobic001G267600 Sobic002G189100--Sobic001G267600 Sobic010G209200--Sobic009G122400 Sobic010G209200--Sobic004G191400 Sobic010G209200--Sobic003G428700 Sobic010G209200--Sobic003G228900 Sobic010G209200--Sobic001G079300 Sobic010G209200--Sobic004G191300 Sobic001G138600 Sobic001G138600 Sobic010G209200--Sobic001G138600 Sobic007G213800 Sobic007G213800 Sobic010G209200--Sobic007G213800 Sobic010G209200--Sobic009G184000 Sobic002G220000--Sobic003G093000 Sobic001G035100 Sobic001G035100 Sobic002G220000--Sobic001G035100 Sobic002G220000--Sobic001G330400 Sobic002G220000--Sobic003G428700 Sobic002G220000--Sobic003G092900 Sobic002G220000--Sobic009G122400 Sobic002G220000--Sobic004G169200 Sobic002G220000--Sobic002G189100 Sobic004G219800 Sobic004G219800 Sobic002G220000--Sobic004G219800
Octagon: transcription factors


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