Gene annotation
Transcriptome id Sobic.003G268600.1,Sobic.003G268600.2
Synonym Sb03g032100
Functional annotation -
UniProt C5XHJ2 , A0A1B6Q5K0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g50350.2 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G442100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -
2 Sobic.001G330400 ZOS3-11 - C2H2 zinc finger protein, expressed -
3 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
4 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
5 Sobic.005G086600 O-methyltransferase, putative, expressed -
6 Sobic.007G017500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
7 Sobic.008G066401 - -
8 Sobic.003G064200 MYB family transcription factor, putative, expressed -
9 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.003G073380 - -
11 Sobic.004G191400 - -
12 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.006G235000 expressed protein -
14 Sobic.006G007900 SbOMT3 is involved in the biosynthesis of the allelochemical sorgoleone. Highly expressed in rrot hairs.(PubMedID : 17998204)@"Catalyse the A ringspecific 3,5-bis-O-methylation of resveratrol, yielding pterostilbene, preference for alkylresorcinolic-type substrates"(PubMedID : 21902799)@Produced pinostilbene as the major product besides a very small amount of pterostilbene from resveratrol in E.coli.(PubMedID : 24267561)@"Methylation activity in the A ring hydroxyl group against resveratrol as well as 3,5-dihydroxy-4'-methoxystilbene"(PubMedID : 25033820)@Catalytic activity for transferring one methyl group to the hydroxyl group at the 3- or 5-position in resveratrol in E.coli. Weak activity for methylation of both hydroxyl groups to generate pterostilbene in E.coli.(PubMedID : 25715927)@O-methyltransferase, putative, expressed -
15 Sobic.006G235100 expressed protein -
16 Sobic.007G122800 expressed protein -
17 Sobic.004G294400 expansin precursor, putative, expressed -
18 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.001G310600 expressed protein -


Gene co-expression network
sample Sobic003G268600 Sobic003G268600 Sobic003G442100 Sobic003G442100 Sobic003G268600--Sobic003G442100 Sobic001G330400 Sobic001G330400 Sobic003G268600--Sobic001G330400 Sobic003G043600 Sobic003G043600 Sobic003G268600--Sobic003G043600 Sobic006G075400 Sobic006G075400 Sobic003G268600--Sobic006G075400 Sobic005G086600 Sobic005G086600 Sobic003G268600--Sobic005G086600 Sobic007G017500 Sobic007G017500 Sobic003G268600--Sobic007G017500 Sobic008G066401 Sobic008G066401 Sobic003G268600--Sobic008G066401 Sobic003G064200 Sobic003G064200 Sobic003G268600--Sobic003G064200 Sobic009G145500 Sobic009G145500 Sobic003G268600--Sobic009G145500 Sobic003G442100--Sobic003G268600 Sobic001G310600 Sobic001G310600 Sobic003G442100--Sobic001G310600 Sobic003G442100--Sobic003G043600 Sobic006G235100 Sobic006G235100 Sobic003G442100--Sobic006G235100 Sobic001G259900 Sobic001G259900 Sobic003G442100--Sobic001G259900 Sobic006G007900 Sobic006G007900 Sobic003G442100--Sobic006G007900 Sobic004G191400 Sobic004G191400 Sobic003G442100--Sobic004G191400 Sobic003G442100--Sobic006G075400 Sobic003G442100--Sobic005G086600 Sobic001G330400--Sobic003G268600 Sobic001G330400--Sobic006G075400 Sobic004G219800 Sobic004G219800 Sobic001G330400--Sobic004G219800 Sobic001G330400--Sobic007G017500 Sobic009G122400 Sobic009G122400 Sobic001G330400--Sobic009G122400 Sobic004G294400 Sobic004G294400 Sobic001G330400--Sobic004G294400 Sobic001G318700 Sobic001G318700 Sobic001G330400--Sobic001G318700 Sobic002G220000 Sobic002G220000 Sobic001G330400--Sobic002G220000 Sobic001G330100 Sobic001G330100 Sobic001G330400--Sobic001G330100 Sobic002G338500 Sobic002G338500 Sobic003G043600--Sobic002G338500 Sobic003G043600--Sobic009G145500 Sobic003G043600--Sobic003G268600 Sobic003G043600--Sobic006G075400 Sobic003G043600--Sobic003G442100 Sobic003G043600--Sobic001G310600 Sobic009G184000 Sobic009G184000 Sobic003G043600--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic003G043600--Sobic009G145700 Sobic003G043600--Sobic001G318700 Sobic006G075400--Sobic007G017500 Sobic006G075400--Sobic004G294400 Sobic003G228900 Sobic003G228900 Sobic006G075400--Sobic003G228900 Sobic006G075400--Sobic003G043600 Sobic006G075400--Sobic003G268600 Sobic006G075400--Sobic001G330400 Sobic003G432700 Sobic003G432700 Sobic006G075400--Sobic003G432700 Sobic005G107900 Sobic005G107900 Sobic006G075400--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic006G075400--Sobic001G502400 Sobic006G008000 Sobic006G008000 Sobic005G086600--Sobic006G008000 Sobic005G086600--Sobic003G268600 Sobic003G073380 Sobic003G073380 Sobic005G086600--Sobic003G073380 Sobic003G079200 Sobic003G079200 Sobic005G086600--Sobic003G079200 Sobic005G086600--Sobic006G235100 Sobic005G086600--Sobic006G007900 Sobic005G086600--Sobic003G442100 Sobic004G161751 Sobic004G161751 Sobic005G086600--Sobic004G161751 Sobic001G259400 Sobic001G259400 Sobic005G086600--Sobic001G259400 Sobic007G017500--Sobic006G075400 Sobic007G017500--Sobic004G294400 Sobic007G017500--Sobic003G228900 Sobic007G017500--Sobic003G268600 Sobic004G141100 Sobic004G141100 Sobic007G017500--Sobic004G141100 Sobic007G017500--Sobic001G330400 Sobic007G017500--Sobic004G219800 Sobic004G041900 Sobic004G041900 Sobic007G017500--Sobic004G041900 Sobic007G017500--Sobic003G043600 Sobic008G066401--Sobic009G145700 Sobic009G145600 Sobic009G145600 Sobic008G066401--Sobic009G145600 Sobic008G066200 Sobic008G066200 Sobic008G066401--Sobic008G066200 Sobic002G012500 Sobic002G012500 Sobic008G066401--Sobic002G012500 Sobic007G169700 Sobic007G169700 Sobic008G066401--Sobic007G169700 Sobic008G066401--Sobic009G184000 Sobic008G066401--Sobic006G008000 Sobic003G043500 Sobic003G043500 Sobic008G066401--Sobic003G043500 Sobic003G362700 Sobic003G362700 Sobic008G066401--Sobic003G362700 Sobic003G064200--Sobic003G268600 Sobic003G064200--Sobic003G442100 Sobic009G184100 Sobic009G184100 Sobic003G064200--Sobic009G184100 Sobic003G064200--Sobic009G184000 Sobic003G064200--Sobic004G191400 Sobic003G064200--Sobic009G122400 Sobic003G064200--Sobic008G066401 Sobic010G209200 Sobic010G209200 Sobic003G064200--Sobic010G209200 Sobic003G064200--Sobic001G318700 Sobic009G145500--Sobic003G043600 Sobic009G145500--Sobic003G073380 Sobic004G148200 Sobic004G148200 Sobic009G145500--Sobic004G148200 Sobic001G231400 Sobic001G231400 Sobic009G145500--Sobic001G231400 Sobic009G145500--Sobic003G268600 Sobic009G145500--Sobic002G338500 Sobic006G235000 Sobic006G235000 Sobic009G145500--Sobic006G235000 Sobic009G145500--Sobic009G145600 Sobic006G268800 Sobic006G268800 Sobic009G145500--Sobic006G268800
Octagon: transcription factors


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