Gene annotation
Transcriptome id Sobic.007G017500.1
Synonym Sb07g001500
Functional annotation FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed
UniProt A0A1B6PEZ8
Pfam PF04030 PF01565
Panther DB PTHR13878 PTHR13878:SF43
NCBI CDD KOG4730; D-arabinono-1, 4-lactone oxidase
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0003885D-arabinono-1,4-lactone oxidase activity GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT2G46740 : D-arabinono-1,4-lactone oxidase family protein
RAP-DB (Rice) LOC_Os08g02230.1 : FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a030258 , Zm00025a004437 , Zm00025a017395
Brachypodium -
Barley -
Wheat TraesCSU02G116200 , TraesCS5A02G538900 , TraesCSU02G116300 , TraesCS5A02G539000 , TraesCS1D02G095600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
2 Sobic.004G294400 expansin precursor, putative, expressed -
3 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
4 Sobic.003G268600 - -
5 Sobic.004G141100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
6 Sobic.001G330400 ZOS3-11 - C2H2 zinc finger protein, expressed -
7 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.004G041900 apoptosis-inducing factor 2, putative, expressed -
9 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
10 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
11 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
12 Sobic.006G235100 expressed protein -
13 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
14 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
15 Sobic.001G313600 heavy metal-associated domain containing protein, expressed -
16 Sobic.001G481100 DUF581 domain containing protein, expressed -
17 Sobic.001G502400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed -
18 Sobic.003G442100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -
19 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.002G351300 expressed protein -


Gene co-expression network
sample Sobic007G017500 Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic007G017500--Sobic006G075400 Sobic004G294400 Sobic004G294400 Sobic007G017500--Sobic004G294400 Sobic003G228900 Sobic003G228900 Sobic007G017500--Sobic003G228900 Sobic003G268600 Sobic003G268600 Sobic007G017500--Sobic003G268600 Sobic004G141100 Sobic004G141100 Sobic007G017500--Sobic004G141100 Sobic001G330400 Sobic001G330400 Sobic007G017500--Sobic001G330400 Sobic004G219800 Sobic004G219800 Sobic007G017500--Sobic004G219800 Sobic004G041900 Sobic004G041900 Sobic007G017500--Sobic004G041900 Sobic003G043600 Sobic003G043600 Sobic007G017500--Sobic003G043600 Sobic006G075400--Sobic007G017500 Sobic006G075400--Sobic004G294400 Sobic006G075400--Sobic003G228900 Sobic006G075400--Sobic003G043600 Sobic006G075400--Sobic003G268600 Sobic006G075400--Sobic001G330400 Sobic003G432700 Sobic003G432700 Sobic006G075400--Sobic003G432700 Sobic005G107900 Sobic005G107900 Sobic006G075400--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic006G075400--Sobic001G502400 Sobic004G294400--Sobic007G017500 Sobic001G256700 Sobic001G256700 Sobic004G294400--Sobic001G256700 Sobic004G294400--Sobic006G075400 Sobic004G108200 Sobic004G108200 Sobic004G294400--Sobic004G108200 Sobic001G195200 Sobic001G195200 Sobic004G294400--Sobic001G195200 Sobic007G122800 Sobic007G122800 Sobic004G294400--Sobic007G122800 Sobic004G294400--Sobic003G228900 Sobic002G395300 Sobic002G395300 Sobic004G294400--Sobic002G395300 Sobic004G191300 Sobic004G191300 Sobic004G294400--Sobic004G191300 Sobic003G228900--Sobic006G075400 Sobic010G209200 Sobic010G209200 Sobic003G228900--Sobic010G209200 Sobic009G184000 Sobic009G184000 Sobic003G228900--Sobic009G184000 Sobic004G191400 Sobic004G191400 Sobic003G228900--Sobic004G191400 Sobic003G228900--Sobic003G432700 Sobic003G260300 Sobic003G260300 Sobic003G228900--Sobic003G260300 Sobic003G228900--Sobic007G017500 Sobic009G122400 Sobic009G122400 Sobic003G228900--Sobic009G122400 Sobic001G079300 Sobic001G079300 Sobic003G228900--Sobic001G079300 Sobic003G442100 Sobic003G442100 Sobic003G268600--Sobic003G442100 Sobic003G268600--Sobic001G330400 Sobic003G268600--Sobic003G043600 Sobic003G268600--Sobic006G075400 Sobic005G086600 Sobic005G086600 Sobic003G268600--Sobic005G086600 Sobic003G268600--Sobic007G017500 Sobic008G066401 Sobic008G066401 Sobic003G268600--Sobic008G066401 Sobic003G064200 Sobic003G064200 Sobic003G268600--Sobic003G064200 Sobic009G145500 Sobic009G145500 Sobic003G268600--Sobic009G145500 Sobic002G351300 Sobic002G351300 Sobic004G141100--Sobic002G351300 Sobic006G235100 Sobic006G235100 Sobic004G141100--Sobic006G235100 Sobic010G082600 Sobic010G082600 Sobic004G141100--Sobic010G082600 Sobic004G141100--Sobic007G017500 Sobic004G141100--Sobic006G075400 Sobic008G009400 Sobic008G009400 Sobic004G141100--Sobic008G009400 Sobic006G054800 Sobic006G054800 Sobic004G141100--Sobic006G054800 Sobic006G008000 Sobic006G008000 Sobic004G141100--Sobic006G008000 Sobic004G141100--Sobic008G066401 Sobic001G330400--Sobic003G268600 Sobic001G330400--Sobic006G075400 Sobic001G330400--Sobic004G219800 Sobic001G330400--Sobic007G017500 Sobic001G330400--Sobic009G122400 Sobic001G330400--Sobic004G294400 Sobic001G318700 Sobic001G318700 Sobic001G330400--Sobic001G318700 Sobic002G220000 Sobic002G220000 Sobic001G330400--Sobic002G220000 Sobic001G330100 Sobic001G330100 Sobic001G330400--Sobic001G330100 Sobic004G219800--Sobic001G256700 Sobic004G219800--Sobic001G330100 Sobic004G352000 Sobic004G352000 Sobic004G219800--Sobic004G352000 Sobic004G219800--Sobic001G330400 Sobic009G032000 Sobic009G032000 Sobic004G219800--Sobic009G032000 Sobic008G187001 Sobic008G187001 Sobic004G219800--Sobic008G187001 Sobic002G388900 Sobic002G388900 Sobic004G219800--Sobic002G388900 Sobic004G219800--Sobic007G017500 Sobic004G219800--Sobic006G075400 Sobic004G041900--Sobic006G075400 Sobic004G041900--Sobic007G017500 Sobic004G041900--Sobic003G043600 Sobic004G041900--Sobic001G330400 Sobic004G041900--Sobic009G184000 Sobic004G041900--Sobic001G318700 Sobic004G041900--Sobic003G228900 Sobic001G031700 Sobic001G031700 Sobic004G041900--Sobic001G031700 Sobic004G041900--Sobic003G268600 Sobic002G338500 Sobic002G338500 Sobic003G043600--Sobic002G338500 Sobic003G043600--Sobic009G145500 Sobic003G043600--Sobic003G268600 Sobic003G043600--Sobic006G075400 Sobic003G043600--Sobic003G442100 Sobic001G310600 Sobic001G310600 Sobic003G043600--Sobic001G310600 Sobic003G043600--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic003G043600--Sobic009G145700 Sobic003G043600--Sobic001G318700
Octagon: transcription factors


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