Gene annotation
Transcriptome id Sobic.004G041900.2,Sobic.004G041900.1
Synonym Sb04g003630
Functional annotation apoptosis-inducing factor 2, putative, expressed
UniProt A0A1Z5RKW4 , C5XUP8
Pfam PF00070
Panther DB PTHR22912
NCBI CDD KOG2495; NADH-dehydrogenase (ubiquinone)
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G44190 : FAD/NAD(P)-binding oxidoreductase family protein
RAP-DB (Rice) LOC_Os02g05680.2,LOC_Os02g05680.1 : apoptosis-inducing factor 2, putative, expressed
MaizeGDB (Corn) Zm00025a034883
Brachypodium KQJ93349
Barley HORVU4Hr1G035700.1 , HORVU6Hr1G022380.5 , HORVU6Hr1G022380.4 , HORVU6Hr1G022380.3 , HORVU6Hr1G022380.2 , HORVU6Hr1G022380.1
Wheat TraesCS6A02G121300 , TraesCS6D02G111400 , TraesCS6B02G149600 , TraesCS6B02G149600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
2 Sobic.007G017500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
3 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
4 Sobic.001G330400 ZOS3-11 - C2H2 zinc finger protein, expressed -
5 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
6 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
8 Sobic.001G031700 nucleobase-ascorbate transporter, putative, expressed -
9 Sobic.003G268600 - -
10 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.003G064200 MYB family transcription factor, putative, expressed -
12 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.006G235100 expressed protein -
14 Sobic.004G141100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
15 Sobic.010G221300 expressed protein -
16 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
17 Sobic.003G125650 - K02183: calmodulin
18 Sobic.001G502400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed -
19 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
20 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic004G041900 Sobic004G041900 Sobic006G075400 Sobic006G075400 Sobic004G041900--Sobic006G075400 Sobic007G017500 Sobic007G017500 Sobic004G041900--Sobic007G017500 Sobic003G043600 Sobic003G043600 Sobic004G041900--Sobic003G043600 Sobic001G330400 Sobic001G330400 Sobic004G041900--Sobic001G330400 Sobic009G184000 Sobic009G184000 Sobic004G041900--Sobic009G184000 Sobic001G318700 Sobic001G318700 Sobic004G041900--Sobic001G318700 Sobic003G228900 Sobic003G228900 Sobic004G041900--Sobic003G228900 Sobic001G031700 Sobic001G031700 Sobic004G041900--Sobic001G031700 Sobic003G268600 Sobic003G268600 Sobic004G041900--Sobic003G268600 Sobic006G075400--Sobic007G017500 Sobic004G294400 Sobic004G294400 Sobic006G075400--Sobic004G294400 Sobic006G075400--Sobic003G228900 Sobic006G075400--Sobic003G043600 Sobic006G075400--Sobic003G268600 Sobic006G075400--Sobic001G330400 Sobic003G432700 Sobic003G432700 Sobic006G075400--Sobic003G432700 Sobic005G107900 Sobic005G107900 Sobic006G075400--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic006G075400--Sobic001G502400 Sobic007G017500--Sobic006G075400 Sobic007G017500--Sobic004G294400 Sobic007G017500--Sobic003G228900 Sobic007G017500--Sobic003G268600 Sobic004G141100 Sobic004G141100 Sobic007G017500--Sobic004G141100 Sobic007G017500--Sobic001G330400 Sobic004G219800 Sobic004G219800 Sobic007G017500--Sobic004G219800 Sobic007G017500--Sobic004G041900 Sobic007G017500--Sobic003G043600 Sobic002G338500 Sobic002G338500 Sobic003G043600--Sobic002G338500 Sobic009G145500 Sobic009G145500 Sobic003G043600--Sobic009G145500 Sobic003G043600--Sobic003G268600 Sobic003G043600--Sobic006G075400 Sobic003G442100 Sobic003G442100 Sobic003G043600--Sobic003G442100 Sobic001G310600 Sobic001G310600 Sobic003G043600--Sobic001G310600 Sobic003G043600--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic003G043600--Sobic009G145700 Sobic003G043600--Sobic001G318700 Sobic001G330400--Sobic003G268600 Sobic001G330400--Sobic006G075400 Sobic001G330400--Sobic004G219800 Sobic001G330400--Sobic007G017500 Sobic009G122400 Sobic009G122400 Sobic001G330400--Sobic009G122400 Sobic001G330400--Sobic004G294400 Sobic001G330400--Sobic001G318700 Sobic002G220000 Sobic002G220000 Sobic001G330400--Sobic002G220000 Sobic001G330100 Sobic001G330100 Sobic001G330400--Sobic001G330100 Sobic001G112200 Sobic001G112200 Sobic009G184000--Sobic001G112200 Sobic007G169700 Sobic007G169700 Sobic009G184000--Sobic007G169700 Sobic006G235100 Sobic006G235100 Sobic009G184000--Sobic006G235100 Sobic009G184000--Sobic001G502400 Sobic009G184000--Sobic003G228900 Sobic009G184000--Sobic003G432700 Sobic001G138600 Sobic001G138600 Sobic009G184000--Sobic001G138600 Sobic008G066401 Sobic008G066401 Sobic009G184000--Sobic008G066401 Sobic002G189100 Sobic002G189100 Sobic009G184000--Sobic002G189100 Sobic001G318700--Sobic001G112200 Sobic001G018300 Sobic001G018300 Sobic001G318700--Sobic001G018300 Sobic004G243100 Sobic004G243100 Sobic001G318700--Sobic004G243100 Sobic002G192000 Sobic002G192000 Sobic001G318700--Sobic002G192000 Sobic003G303100 Sobic003G303100 Sobic001G318700--Sobic003G303100 Sobic002G251000 Sobic002G251000 Sobic001G318700--Sobic002G251000 Sobic001G140900 Sobic001G140900 Sobic001G318700--Sobic001G140900 Sobic001G318700--Sobic006G075400 Sobic001G481100 Sobic001G481100 Sobic001G318700--Sobic001G481100 Sobic003G228900--Sobic006G075400 Sobic010G209200 Sobic010G209200 Sobic003G228900--Sobic010G209200 Sobic003G228900--Sobic009G184000 Sobic004G191400 Sobic004G191400 Sobic003G228900--Sobic004G191400 Sobic003G228900--Sobic003G432700 Sobic003G260300 Sobic003G260300 Sobic003G228900--Sobic003G260300 Sobic003G228900--Sobic007G017500 Sobic003G228900--Sobic009G122400 Sobic001G079300 Sobic001G079300 Sobic003G228900--Sobic001G079300 Sobic001G031700--Sobic004G041900 Sobic001G031700--Sobic007G017500 Sobic001G031700--Sobic006G075400 Sobic001G295200 Sobic001G295200 Sobic001G031700--Sobic001G295200 Sobic007G058400 Sobic007G058400 Sobic001G031700--Sobic007G058400 Sobic001G031700--Sobic003G432700 Sobic010G221300 Sobic010G221300 Sobic001G031700--Sobic010G221300 Sobic001G031700--Sobic004G294400 Sobic001G313600 Sobic001G313600 Sobic001G031700--Sobic001G313600 Sobic003G268600--Sobic003G442100 Sobic003G268600--Sobic001G330400 Sobic003G268600--Sobic003G043600 Sobic003G268600--Sobic006G075400 Sobic005G086600 Sobic005G086600 Sobic003G268600--Sobic005G086600 Sobic003G268600--Sobic007G017500 Sobic003G268600--Sobic008G066401 Sobic003G064200 Sobic003G064200 Sobic003G268600--Sobic003G064200 Sobic003G268600--Sobic009G145500
Octagon: transcription factors


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