Gene annotation
Transcriptome id Sobic.001G031700.1
Synonym Sb01g002960
Functional annotation nucleobase-ascorbate transporter, putative, expressed
UniProt C5WUY7
Pfam PF00860
Panther DB PTHR11119 PTHR11119:SF39
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT5G62890 : Xanthine/uracil permease family protein
RAP-DB (Rice) LOC_Os03g60880.2 : nucleobase-ascorbate transporter, putative, expressed
MaizeGDB (Corn) Zm00025a016410 , Zm00025a006101 , Zm00025a008846
Brachypodium KQK12396 , PNT73881
Barley HORVU5Hr1G114470.3 , HORVU5Hr1G114470.4 , HORVU5Hr1G114470.5 , HORVU5Hr1G114470.6 , HORVU5Hr1G114470.7 , HORVU5Hr1G114470.8 , HORVU5Hr1G114470.9 , HORVU5Hr1G114470.12 , HORVU5Hr1G114470.13 , HORVU5Hr1G114470.10 , HORVU5Hr1G114470.11 , HORVU5Hr1G114470.16 , HORVU5Hr1G114470.17 , HORVU5Hr1G114470.14 , HORVU5Hr1G114470.15 , HORVU5Hr1G114470.1 , HORVU5Hr1G114470.2
Wheat TraesCS5B02G499100 , TraesCS5D02G499100 , TraesCS5A02G485500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G041900 apoptosis-inducing factor 2, putative, expressed -
2 Sobic.007G017500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
3 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
4 Sobic.001G295200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
5 Sobic.007G058400 Superior methylation activity against resveratrol compared with that of sbOMT3(PubMedID : 25033820)@O-methyltransferase, putative, expressed -
6 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
7 Sobic.010G221300 expressed protein -
8 Sobic.004G294400 expansin precursor, putative, expressed -
9 Sobic.001G313600 heavy metal-associated domain containing protein, expressed -
10 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
11 Sobic.006G141700 OsGrx_C2.2 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
12 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
13 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
14 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
15 Sobic.004G141100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
16 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
17 Sobic.010G047100 histone H3, putative, expressed K11253: histone H3
18 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.006G235100 expressed protein -
20 Sobic.003G125650 - K02183: calmodulin


Gene co-expression network
sample Sobic001G031700 Sobic001G031700 Sobic004G041900 Sobic004G041900 Sobic001G031700--Sobic004G041900 Sobic007G017500 Sobic007G017500 Sobic001G031700--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic001G031700--Sobic006G075400 Sobic001G295200 Sobic001G295200 Sobic001G031700--Sobic001G295200 Sobic007G058400 Sobic007G058400 Sobic001G031700--Sobic007G058400 Sobic003G432700 Sobic003G432700 Sobic001G031700--Sobic003G432700 Sobic010G221300 Sobic010G221300 Sobic001G031700--Sobic010G221300 Sobic004G294400 Sobic004G294400 Sobic001G031700--Sobic004G294400 Sobic001G313600 Sobic001G313600 Sobic001G031700--Sobic001G313600 Sobic004G041900--Sobic006G075400 Sobic004G041900--Sobic007G017500 Sobic003G043600 Sobic003G043600 Sobic004G041900--Sobic003G043600 Sobic001G330400 Sobic001G330400 Sobic004G041900--Sobic001G330400 Sobic009G184000 Sobic009G184000 Sobic004G041900--Sobic009G184000 Sobic001G318700 Sobic001G318700 Sobic004G041900--Sobic001G318700 Sobic003G228900 Sobic003G228900 Sobic004G041900--Sobic003G228900 Sobic004G041900--Sobic001G031700 Sobic003G268600 Sobic003G268600 Sobic004G041900--Sobic003G268600 Sobic007G017500--Sobic006G075400 Sobic007G017500--Sobic004G294400 Sobic007G017500--Sobic003G228900 Sobic007G017500--Sobic003G268600 Sobic004G141100 Sobic004G141100 Sobic007G017500--Sobic004G141100 Sobic007G017500--Sobic001G330400 Sobic004G219800 Sobic004G219800 Sobic007G017500--Sobic004G219800 Sobic007G017500--Sobic004G041900 Sobic007G017500--Sobic003G043600 Sobic006G075400--Sobic007G017500 Sobic006G075400--Sobic004G294400 Sobic006G075400--Sobic003G228900 Sobic006G075400--Sobic003G043600 Sobic006G075400--Sobic003G268600 Sobic006G075400--Sobic001G330400 Sobic006G075400--Sobic003G432700 Sobic005G107900 Sobic005G107900 Sobic006G075400--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic006G075400--Sobic001G502400 Sobic006G141700 Sobic006G141700 Sobic001G295200--Sobic006G141700 Sobic001G018900 Sobic001G018900 Sobic001G295200--Sobic001G018900 Sobic006G116700 Sobic006G116700 Sobic001G295200--Sobic006G116700 Sobic001G361600 Sobic001G361600 Sobic001G295200--Sobic001G361600 Sobic005G113300 Sobic005G113300 Sobic001G295200--Sobic005G113300 Sobic003G078200 Sobic003G078200 Sobic001G295200--Sobic003G078200 Sobic001G036900 Sobic001G036900 Sobic001G295200--Sobic001G036900 Sobic007G197800 Sobic007G197800 Sobic001G295200--Sobic007G197800 Sobic009G215200 Sobic009G215200 Sobic001G295200--Sobic009G215200 Sobic004G229400 Sobic004G229400 Sobic007G058400--Sobic004G229400 Sobic003G427800 Sobic003G427800 Sobic007G058400--Sobic003G427800 Sobic007G058400--Sobic007G017500 Sobic007G058400--Sobic001G031700 Sobic004G229500 Sobic004G229500 Sobic007G058400--Sobic004G229500 Sobic005G013500 Sobic005G013500 Sobic007G058400--Sobic005G013500 Sobic007G058400--Sobic006G075400 Sobic009G205500 Sobic009G205500 Sobic007G058400--Sobic009G205500 Sobic002G351300 Sobic002G351300 Sobic007G058400--Sobic002G351300 Sobic003G432700--Sobic005G107900 Sobic003G432700--Sobic001G502400 Sobic003G432700--Sobic003G228900 Sobic005G011300 Sobic005G011300 Sobic003G432700--Sobic005G011300 Sobic003G432700--Sobic001G313600 Sobic003G432700--Sobic009G184000 Sobic003G432700--Sobic006G075400 Sobic001G169500 Sobic001G169500 Sobic003G432700--Sobic001G169500 Sobic007G169700 Sobic007G169700 Sobic003G432700--Sobic007G169700 Sobic006G191800 Sobic006G191800 Sobic010G221300--Sobic006G191800 Sobic010G221300--Sobic004G041900 Sobic010G221300--Sobic001G031700 Sobic010G047100 Sobic010G047100 Sobic010G221300--Sobic010G047100 Sobic003G160700 Sobic003G160700 Sobic010G221300--Sobic003G160700 Sobic003G125650 Sobic003G125650 Sobic010G221300--Sobic003G125650 Sobic004G203700 Sobic004G203700 Sobic010G221300--Sobic004G203700 Sobic010G221300--Sobic009G184000 Sobic002G387900 Sobic002G387900 Sobic010G221300--Sobic002G387900 Sobic004G294400--Sobic007G017500 Sobic001G256700 Sobic001G256700 Sobic004G294400--Sobic001G256700 Sobic004G294400--Sobic006G075400 Sobic004G108200 Sobic004G108200 Sobic004G294400--Sobic004G108200 Sobic001G195200 Sobic001G195200 Sobic004G294400--Sobic001G195200 Sobic007G122800 Sobic007G122800 Sobic004G294400--Sobic007G122800 Sobic004G294400--Sobic003G228900 Sobic002G395300 Sobic002G395300 Sobic004G294400--Sobic002G395300 Sobic004G191300 Sobic004G191300 Sobic004G294400--Sobic004G191300 Sobic001G313600--Sobic005G107900 Sobic001G313600--Sobic001G502400 Sobic009G188000 Sobic009G188000 Sobic001G313600--Sobic009G188000 Sobic006G235100 Sobic006G235100 Sobic001G313600--Sobic006G235100 Sobic001G313600--Sobic003G432700 Sobic001G313600--Sobic005G011300 Sobic001G313600--Sobic006G075400 Sobic001G304100 Sobic001G304100 Sobic001G313600--Sobic001G304100 Sobic001G313600--Sobic009G184000
Octagon: transcription factors


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