Gene annotation
Transcriptome id Sobic.006G141700.1
Synonym Sb06g022060
Functional annotation OsGrx_C2.2 - glutaredoxin subgroup I, expressed
UniProt C5YBX1
Pfam PF00462
Panther DB PTHR10168 PTHR10168:SF104
NCBI CDD KOG1752; Glutaredoxin and related proteins
KEGG Orthology K03676; grxC, GLRX, glutaredoxin 3
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT5G40370 : Glutaredoxin family protein
RAP-DB (Rice) LOC_Os04g42930.1 : OsGrx_C2.2 - glutaredoxin subgroup I, expressed
MaizeGDB (Corn) Zm00025a010735
Brachypodium KQJ83488
Barley HORVU2Hr1G087970.2
Wheat TraesCS2B02G381600 , TraesCS2D02G361400 , TraesCS2A02G363600
Populus -


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cDNA sequences
Sobic.006G141700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G295200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
2 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
3 Sobic.004G141100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
4 Sobic.002G375100 ribosomal protein S2, putative, expressed K02998: RP-SAe, small subunit ribosomal protein SAe
5 Sobic.006G116700 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
6 Sobic.001G018900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
7 Sobic.003G426400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.001G313600 heavy metal-associated domain containing protein, expressed -
9 Sobic.003G007600 expressed protein -
10 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
11 Sobic.001G361600 chaperonin, putative, expressed K04078: groES, chaperonin GroES
12 Sobic.003G125650 - K02183: calmodulin
13 Sobic.001G402050 - K02979: RP-S28e, small subunit ribosomal protein S28e
14 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
15 Sobic.001G390300 OsCam1-1 - Calmodulin, expressed K02183: calmodulin
16 Sobic.003G408100 ribosomal protein L13, putative, expressed K02873: RP-L13e, large subunit ribosomal protein L13e
17 Sobic.006G235100 expressed protein -
18 Sobic.001G374700 40S ribosomal protein S21, putative, expressed K02971: RP-S21e, small subunit ribosomal protein S21e
19 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
20 Sobic.007G197800 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e


Gene co-expression network
sample Sobic006G141700 Sobic006G141700 Sobic001G295200 Sobic001G295200 Sobic006G141700--Sobic001G295200 Sobic009G188000 Sobic009G188000 Sobic006G141700--Sobic009G188000 Sobic004G141100 Sobic004G141100 Sobic006G141700--Sobic004G141100 Sobic002G375100 Sobic002G375100 Sobic006G141700--Sobic002G375100 Sobic006G116700 Sobic006G116700 Sobic006G141700--Sobic006G116700 Sobic001G018900 Sobic001G018900 Sobic006G141700--Sobic001G018900 Sobic003G426400 Sobic003G426400 Sobic006G141700--Sobic003G426400 Sobic001G313600 Sobic001G313600 Sobic006G141700--Sobic001G313600 Sobic003G007600 Sobic003G007600 Sobic006G141700--Sobic003G007600 Sobic001G295200--Sobic006G141700 Sobic001G295200--Sobic001G018900 Sobic001G295200--Sobic006G116700 Sobic001G361600 Sobic001G361600 Sobic001G295200--Sobic001G361600 Sobic005G113300 Sobic005G113300 Sobic001G295200--Sobic005G113300 Sobic003G078200 Sobic003G078200 Sobic001G295200--Sobic003G078200 Sobic001G036900 Sobic001G036900 Sobic001G295200--Sobic001G036900 Sobic007G197800 Sobic007G197800 Sobic001G295200--Sobic007G197800 Sobic009G215200 Sobic009G215200 Sobic001G295200--Sobic009G215200 Sobic009G188000--Sobic001G313600 Sobic001G304100 Sobic001G304100 Sobic009G188000--Sobic001G304100 Sobic005G107900 Sobic005G107900 Sobic009G188000--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic009G188000--Sobic001G502400 Sobic001G238400 Sobic001G238400 Sobic009G188000--Sobic001G238400 Sobic006G235100 Sobic006G235100 Sobic009G188000--Sobic006G235100 Sobic003G084400 Sobic003G084400 Sobic009G188000--Sobic003G084400 Sobic008G009400 Sobic008G009400 Sobic009G188000--Sobic008G009400 Sobic009G188000--Sobic001G295200 Sobic002G351300 Sobic002G351300 Sobic004G141100--Sobic002G351300 Sobic004G141100--Sobic006G235100 Sobic010G082600 Sobic010G082600 Sobic004G141100--Sobic010G082600 Sobic007G017500 Sobic007G017500 Sobic004G141100--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic004G141100--Sobic006G075400 Sobic004G141100--Sobic008G009400 Sobic006G054800 Sobic006G054800 Sobic004G141100--Sobic006G054800 Sobic006G008000 Sobic006G008000 Sobic004G141100--Sobic006G008000 Sobic008G066401 Sobic008G066401 Sobic004G141100--Sobic008G066401 Sobic002G375100--Sobic001G018900 Sobic002G375100--Sobic006G116700 Sobic001G374700 Sobic001G374700 Sobic002G375100--Sobic001G374700 Sobic003G408100 Sobic003G408100 Sobic002G375100--Sobic003G408100 Sobic002G375100--Sobic001G036900 Sobic002G375100--Sobic009G215200 Sobic001G016400 Sobic001G016400 Sobic002G375100--Sobic001G016400 Sobic002G375100--Sobic007G197800 Sobic009G050300 Sobic009G050300 Sobic002G375100--Sobic009G050300 Sobic006G116700--Sobic009G050300 Sobic006G116700--Sobic007G197800 Sobic006G116700--Sobic009G215200 Sobic006G116700--Sobic001G018900 Sobic002G081600 Sobic002G081600 Sobic006G116700--Sobic002G081600 Sobic004G008400 Sobic004G008400 Sobic006G116700--Sobic004G008400 Sobic001G130301 Sobic001G130301 Sobic006G116700--Sobic001G130301 Sobic002G200600 Sobic002G200600 Sobic006G116700--Sobic002G200600 Sobic006G116700--Sobic001G036900 Sobic001G018900--Sobic006G116700 Sobic001G018900--Sobic009G215200 Sobic001G018900--Sobic009G050300 Sobic001G018900--Sobic001G036900 Sobic001G018900--Sobic007G197800 Sobic001G018900--Sobic002G375100 Sobic001G018900--Sobic001G130301 Sobic001G018900--Sobic001G016400 Sobic001G018900--Sobic003G408100 Sobic002G055700 Sobic002G055700 Sobic003G426400--Sobic002G055700 Sobic003G303100 Sobic003G303100 Sobic003G426400--Sobic003G303100 Sobic009G111000 Sobic009G111000 Sobic003G426400--Sobic009G111000 Sobic001G367600 Sobic001G367600 Sobic003G426400--Sobic001G367600 Sobic003G043600 Sobic003G043600 Sobic003G426400--Sobic003G043600 Sobic004G237800 Sobic004G237800 Sobic003G426400--Sobic004G237800 Sobic005G063100 Sobic005G063100 Sobic003G426400--Sobic005G063100 Sobic003G426400--Sobic006G141700 Sobic004G203700 Sobic004G203700 Sobic003G426400--Sobic004G203700 Sobic001G313600--Sobic005G107900 Sobic001G313600--Sobic001G502400 Sobic001G313600--Sobic009G188000 Sobic001G313600--Sobic006G235100 Sobic003G432700 Sobic003G432700 Sobic001G313600--Sobic003G432700 Sobic005G011300 Sobic005G011300 Sobic001G313600--Sobic005G011300 Sobic001G313600--Sobic006G075400 Sobic001G313600--Sobic001G304100 Sobic009G184000 Sobic009G184000 Sobic001G313600--Sobic009G184000 Sobic003G299300 Sobic003G299300 Sobic003G007600--Sobic003G299300 Sobic003G007600--Sobic001G238400 Sobic010G270500 Sobic010G270500 Sobic003G007600--Sobic010G270500 Sobic006G103000 Sobic006G103000 Sobic003G007600--Sobic006G103000 Sobic003G007600--Sobic001G304100 Sobic002G017800 Sobic002G017800 Sobic003G007600--Sobic002G017800 Sobic003G007600--Sobic009G111000 Sobic001G318500 Sobic001G318500 Sobic003G007600--Sobic001G318500 Sobic001G402200 Sobic001G402200 Sobic003G007600--Sobic001G402200
Octagon: transcription factors


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