Gene annotation
Transcriptome id Sobic.005G086600.1
Synonym Sb05g007043
Functional annotation O-methyltransferase, putative, expressed
UniProt K7WZ97 , A0A1B6PR13
Pfam PF08100 PF00891
Panther DB PTHR11746 PTHR11746:SF86
NCBI CDD KOG3178; Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases
KEGG Orthology -
Gene Ontology GO:0008171; O-methyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G54160 : O-methyltransferase 1
RAP-DB (Rice) LOC_Os05g43940.1 : O-methyltransferase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G008000 O-methyltransferase, putative, expressed -
2 Sobic.003G268600 - -
3 Sobic.003G073380 - -
4 Sobic.003G079200 - -
5 Sobic.006G235100 expressed protein -
6 Sobic.006G007900 SbOMT3 is involved in the biosynthesis of the allelochemical sorgoleone. Highly expressed in rrot hairs.(PubMedID : 17998204)@"Catalyse the A ringspecific 3,5-bis-O-methylation of resveratrol, yielding pterostilbene, preference for alkylresorcinolic-type substrates"(PubMedID : 21902799)@Produced pinostilbene as the major product besides a very small amount of pterostilbene from resveratrol in E.coli.(PubMedID : 24267561)@"Methylation activity in the A ring hydroxyl group against resveratrol as well as 3,5-dihydroxy-4'-methoxystilbene"(PubMedID : 25033820)@Catalytic activity for transferring one methyl group to the hydroxyl group at the 3- or 5-position in resveratrol in E.coli. Weak activity for methylation of both hydroxyl groups to generate pterostilbene in E.coli.(PubMedID : 25715927)@O-methyltransferase, putative, expressed -
7 Sobic.003G442100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -
8 Sobic.004G161751 - -
9 Sobic.001G259400 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
10 Sobic.002G012500 DUF538 domain containing protein, putative, expressed -
11 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
12 Sobic.006G235000 expressed protein -
13 Sobic.008G066200 expressed protein -
14 Sobic.003G269000 STE_MEKK_ste11_MAP3K.7 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
15 Sobic.008G066401 - -
16 Sobic.002G063800 transferase family protein, putative, expressed -
17 Sobic.001G188800 cysteine-rich repeat secretory protein 55 precursor, putative, expressed -
18 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
19 Sobic.004G064500 class I glutamine amidotransferase, putative, expressed -
20 Sobic.003G064200 MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic005G086600 Sobic005G086600 Sobic006G008000 Sobic006G008000 Sobic005G086600--Sobic006G008000 Sobic003G268600 Sobic003G268600 Sobic005G086600--Sobic003G268600 Sobic003G073380 Sobic003G073380 Sobic005G086600--Sobic003G073380 Sobic003G079200 Sobic003G079200 Sobic005G086600--Sobic003G079200 Sobic006G235100 Sobic006G235100 Sobic005G086600--Sobic006G235100 Sobic006G007900 Sobic006G007900 Sobic005G086600--Sobic006G007900 Sobic003G442100 Sobic003G442100 Sobic005G086600--Sobic003G442100 Sobic004G161751 Sobic004G161751 Sobic005G086600--Sobic004G161751 Sobic001G259400 Sobic001G259400 Sobic005G086600--Sobic001G259400 Sobic008G066200 Sobic008G066200 Sobic006G008000--Sobic008G066200 Sobic002G012500 Sobic002G012500 Sobic006G008000--Sobic002G012500 Sobic006G008000--Sobic003G079200 Sobic006G008000--Sobic005G086600 Sobic002G012300 Sobic002G012300 Sobic006G008000--Sobic002G012300 Sobic009G145600 Sobic009G145600 Sobic006G008000--Sobic009G145600 Sobic009G145700 Sobic009G145700 Sobic006G008000--Sobic009G145700 Sobic008G022000 Sobic008G022000 Sobic006G008000--Sobic008G022000 Sobic008G066401 Sobic008G066401 Sobic006G008000--Sobic008G066401 Sobic003G268600--Sobic003G442100 Sobic001G330400 Sobic001G330400 Sobic003G268600--Sobic001G330400 Sobic003G043600 Sobic003G043600 Sobic003G268600--Sobic003G043600 Sobic006G075400 Sobic006G075400 Sobic003G268600--Sobic006G075400 Sobic003G268600--Sobic005G086600 Sobic007G017500 Sobic007G017500 Sobic003G268600--Sobic007G017500 Sobic003G268600--Sobic008G066401 Sobic003G064200 Sobic003G064200 Sobic003G268600--Sobic003G064200 Sobic009G145500 Sobic009G145500 Sobic003G268600--Sobic009G145500 Sobic003G269000 Sobic003G269000 Sobic003G073380--Sobic003G269000 Sobic003G073380--Sobic005G086600 Sobic003G073380--Sobic004G161751 Sobic003G073380--Sobic009G145500 Sobic003G073380--Sobic003G268600 Sobic003G073380--Sobic003G043600 Sobic003G073380--Sobic001G330400 Sobic003G050300 Sobic003G050300 Sobic003G073380--Sobic003G050300 Sobic003G073380--Sobic003G079200 Sobic003G079200--Sobic006G008000 Sobic003G079200--Sobic008G066200 Sobic003G079200--Sobic002G012300 Sobic003G079200--Sobic009G145600 Sobic008G158600 Sobic008G158600 Sobic003G079200--Sobic008G158600 Sobic003G079200--Sobic002G012500 Sobic002G063800 Sobic002G063800 Sobic003G079200--Sobic002G063800 Sobic003G079200--Sobic004G161751 Sobic003G079200--Sobic005G086600 Sobic001G502400 Sobic001G502400 Sobic006G235100--Sobic001G502400 Sobic006G235100--Sobic006G007900 Sobic001G313600 Sobic001G313600 Sobic006G235100--Sobic001G313600 Sobic009G184000 Sobic009G184000 Sobic006G235100--Sobic009G184000 Sobic005G107900 Sobic005G107900 Sobic006G235100--Sobic005G107900 Sobic006G235100--Sobic003G442100 Sobic004G141100 Sobic004G141100 Sobic006G235100--Sobic004G141100 Sobic006G235100--Sobic006G075400 Sobic003G432700 Sobic003G432700 Sobic006G235100--Sobic003G432700 Sobic006G007900--Sobic006G235100 Sobic006G007900--Sobic001G259400 Sobic006G007900--Sobic003G442100 Sobic006G007900--Sobic009G184000 Sobic007G122800 Sobic007G122800 Sobic006G007900--Sobic007G122800 Sobic001G259900 Sobic001G259900 Sobic006G007900--Sobic001G259900 Sobic006G007900--Sobic008G066401 Sobic006G007900--Sobic001G502400 Sobic006G007900--Sobic005G086600 Sobic003G442100--Sobic003G268600 Sobic001G310600 Sobic001G310600 Sobic003G442100--Sobic001G310600 Sobic003G442100--Sobic003G043600 Sobic003G442100--Sobic006G235100 Sobic003G442100--Sobic001G259900 Sobic003G442100--Sobic006G007900 Sobic004G191400 Sobic004G191400 Sobic003G442100--Sobic004G191400 Sobic003G442100--Sobic006G075400 Sobic003G442100--Sobic005G086600 Sobic004G161751--Sobic003G079200 Sobic004G161751--Sobic003G073380 Sobic004G161751--Sobic005G086600 Sobic004G161751--Sobic006G008000 Sobic004G161751--Sobic009G145500 Sobic004G161751--Sobic009G145600 Sobic004G161751--Sobic002G063800 Sobic006G235000 Sobic006G235000 Sobic004G161751--Sobic006G235000 Sobic004G161751--Sobic003G043600 Sobic001G259400--Sobic002G012500 Sobic001G259400--Sobic006G007900 Sobic001G259400--Sobic008G066401 Sobic001G259400--Sobic005G086600 Sobic004G064500 Sobic004G064500 Sobic001G259400--Sobic004G064500 Sobic001G259400--Sobic003G079200 Sobic001G259400--Sobic008G066200 Sobic001G259400--Sobic006G008000 Sobic001G259400--Sobic008G158600
Octagon: transcription factors


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