Gene annotation
Transcriptome id Sobic.001G259400.1
Synonym Sb01g023300, JAZ11, JAZ, TIFY3A
Functional annotation tran- scriptional repressor JASMONATE ZIM-DOMAIN (PubMedID : 25711704)
ZIM domain containing protein, putative, expressed
UniProt C5WN75
Pfam PF09425 PF06200
Panther DB PTHR33077 PTHR33077:SF4
NCBI CDD -
KEGG Orthology K13464; jasmonate ZIM domain-containing protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G43440 : jasmonate-zim-domain protein 11
RAP-DB (Rice) LOC_Os03g28940.1 : ZIM domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G012500 DUF538 domain containing protein, putative, expressed -
2 Sobic.006G007900 SbOMT3 is involved in the biosynthesis of the allelochemical sorgoleone. Highly expressed in rrot hairs.(PubMedID : 17998204)@"Catalyse the A ringspecific 3,5-bis-O-methylation of resveratrol, yielding pterostilbene, preference for alkylresorcinolic-type substrates"(PubMedID : 21902799)@Produced pinostilbene as the major product besides a very small amount of pterostilbene from resveratrol in E.coli.(PubMedID : 24267561)@"Methylation activity in the A ring hydroxyl group against resveratrol as well as 3,5-dihydroxy-4'-methoxystilbene"(PubMedID : 25033820)@Catalytic activity for transferring one methyl group to the hydroxyl group at the 3- or 5-position in resveratrol in E.coli. Weak activity for methylation of both hydroxyl groups to generate pterostilbene in E.coli.(PubMedID : 25715927)@O-methyltransferase, putative, expressed -
3 Sobic.008G066401 - -
4 Sobic.005G086600 O-methyltransferase, putative, expressed -
5 Sobic.004G064500 class I glutamine amidotransferase, putative, expressed -
6 Sobic.003G079200 - -
7 Sobic.008G066200 expressed protein -
8 Sobic.006G008000 O-methyltransferase, putative, expressed -
9 Sobic.008G158600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
11 Sobic.003G362700 cytochrome P450, putative, expressed -
12 Sobic.007G122800 expressed protein -
13 Sobic.003G268600 - -
14 Sobic.006G235100 expressed protein -
15 Sobic.002G063800 transferase family protein, putative, expressed -
16 Sobic.009G192600 Protein tyrosine/DOPA decarboxylase 1 (Os)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
17 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.003G142300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.001G259900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein


Gene co-expression network
sample Sobic001G259400 Sobic001G259400 Sobic002G012500 Sobic002G012500 Sobic001G259400--Sobic002G012500 Sobic006G007900 Sobic006G007900 Sobic001G259400--Sobic006G007900 Sobic008G066401 Sobic008G066401 Sobic001G259400--Sobic008G066401 Sobic005G086600 Sobic005G086600 Sobic001G259400--Sobic005G086600 Sobic004G064500 Sobic004G064500 Sobic001G259400--Sobic004G064500 Sobic003G079200 Sobic003G079200 Sobic001G259400--Sobic003G079200 Sobic008G066200 Sobic008G066200 Sobic001G259400--Sobic008G066200 Sobic006G008000 Sobic006G008000 Sobic001G259400--Sobic006G008000 Sobic008G158600 Sobic008G158600 Sobic001G259400--Sobic008G158600 Sobic002G012500--Sobic006G008000 Sobic002G012500--Sobic001G259400 Sobic002G012500--Sobic008G066200 Sobic002G012300 Sobic002G012300 Sobic002G012500--Sobic002G012300 Sobic002G012500--Sobic008G066401 Sobic002G012500--Sobic003G079200 Sobic008G022000 Sobic008G022000 Sobic002G012500--Sobic008G022000 Sobic002G012500--Sobic008G158600 Sobic009G145600 Sobic009G145600 Sobic002G012500--Sobic009G145600 Sobic006G235100 Sobic006G235100 Sobic006G007900--Sobic006G235100 Sobic006G007900--Sobic001G259400 Sobic003G442100 Sobic003G442100 Sobic006G007900--Sobic003G442100 Sobic009G184000 Sobic009G184000 Sobic006G007900--Sobic009G184000 Sobic007G122800 Sobic007G122800 Sobic006G007900--Sobic007G122800 Sobic001G259900 Sobic001G259900 Sobic006G007900--Sobic001G259900 Sobic006G007900--Sobic008G066401 Sobic001G502400 Sobic001G502400 Sobic006G007900--Sobic001G502400 Sobic006G007900--Sobic005G086600 Sobic009G145700 Sobic009G145700 Sobic008G066401--Sobic009G145700 Sobic008G066401--Sobic009G145600 Sobic008G066401--Sobic008G066200 Sobic008G066401--Sobic002G012500 Sobic007G169700 Sobic007G169700 Sobic008G066401--Sobic007G169700 Sobic008G066401--Sobic009G184000 Sobic008G066401--Sobic006G008000 Sobic003G043500 Sobic003G043500 Sobic008G066401--Sobic003G043500 Sobic003G362700 Sobic003G362700 Sobic008G066401--Sobic003G362700 Sobic005G086600--Sobic006G008000 Sobic003G268600 Sobic003G268600 Sobic005G086600--Sobic003G268600 Sobic003G073380 Sobic003G073380 Sobic005G086600--Sobic003G073380 Sobic005G086600--Sobic003G079200 Sobic005G086600--Sobic006G235100 Sobic005G086600--Sobic006G007900 Sobic005G086600--Sobic003G442100 Sobic004G161751 Sobic004G161751 Sobic005G086600--Sobic004G161751 Sobic005G086600--Sobic001G259400 Sobic009G192600 Sobic009G192600 Sobic004G064500--Sobic009G192600 Sobic004G064500--Sobic001G259400 Sobic004G064500--Sobic007G122800 Sobic004G064500--Sobic005G086600 Sobic004G064500--Sobic003G268600 Sobic002G189100 Sobic002G189100 Sobic004G064500--Sobic002G189100 Sobic003G269000 Sobic003G269000 Sobic004G064500--Sobic003G269000 Sobic001G267600 Sobic001G267600 Sobic004G064500--Sobic001G267600 Sobic004G064500--Sobic006G007900 Sobic003G079200--Sobic006G008000 Sobic003G079200--Sobic008G066200 Sobic003G079200--Sobic002G012300 Sobic003G079200--Sobic009G145600 Sobic003G079200--Sobic008G158600 Sobic003G079200--Sobic002G012500 Sobic002G063800 Sobic002G063800 Sobic003G079200--Sobic002G063800 Sobic003G079200--Sobic004G161751 Sobic003G079200--Sobic005G086600 Sobic008G066200--Sobic006G008000 Sobic008G066200--Sobic002G012500 Sobic008G066200--Sobic009G145700 Sobic008G066200--Sobic003G079200 Sobic008G066200--Sobic009G145600 Sobic008G066200--Sobic008G066401 Sobic008G066200--Sobic008G022000 Sobic008G066200--Sobic002G012300 Sobic001G188800 Sobic001G188800 Sobic008G066200--Sobic001G188800 Sobic006G008000--Sobic008G066200 Sobic006G008000--Sobic002G012500 Sobic006G008000--Sobic003G079200 Sobic006G008000--Sobic005G086600 Sobic006G008000--Sobic002G012300 Sobic006G008000--Sobic009G145600 Sobic006G008000--Sobic009G145700 Sobic006G008000--Sobic008G022000 Sobic006G008000--Sobic008G066401 Sobic008G158600--Sobic002G012300 Sobic008G158600--Sobic003G079200 Sobic008G158501 Sobic008G158501 Sobic008G158600--Sobic008G158501 Sobic008G158600--Sobic002G012500 Sobic008G158600--Sobic002G063800 Sobic008G158600--Sobic008G022000 Sobic008G036800 Sobic008G036800 Sobic008G158600--Sobic008G036800 Sobic008G158600--Sobic006G008000 Sobic008G158600--Sobic001G259400
Octagon: transcription factors


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