Gene annotation
Transcriptome id Sobic.008G158600.1
Synonym
Functional annotation LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt -
Pfam PF00234
Panther DB PTHR31731
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G62510 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os03g01320.1 : LTPL116 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a000125
Brachypodium -
Barley HORVU4Hr1G087780.8 , HORVU4Hr1G087780.4 , HORVU4Hr1G087780.5 , HORVU4Hr1G087780.6 , HORVU4Hr1G087780.1 , HORVU4Hr1G087780.7 , HORVU4Hr1G087780.3 , HORVU4Hr1G087770.1 , HORVU4Hr1G087760.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
2 Sobic.003G079200 - -
3 Sobic.008G158501 - -
4 Sobic.002G012500 DUF538 domain containing protein, putative, expressed -
5 Sobic.002G063800 transferase family protein, putative, expressed -
6 Sobic.008G022000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
7 Sobic.008G036800 alkylresorcinol synthase gene preferentially expressed in root hair (PubMedID : 20348430)@Chalcone and stilbene synthase family("PubMedID : 26759170,PubMedID : 24597475")@chalcone synthase, putative, expressed -
8 Sobic.006G008000 O-methyltransferase, putative, expressed -
9 Sobic.001G259400 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
10 Sobic.001G162233 - -
11 Sobic.008G066200 expressed protein -
12 Sobic.005G086600 O-methyltransferase, putative, expressed -
13 Sobic.004G161751 - -
14 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.006G010200 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
16 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
17 Sobic.003G426600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.002G369400 Sulfotransferase family protein (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
19 Sobic.003G313100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.008G066401 - -


Gene co-expression network
sample Sobic008G158600 Sobic008G158600 Sobic002G012300 Sobic002G012300 Sobic008G158600--Sobic002G012300 Sobic003G079200 Sobic003G079200 Sobic008G158600--Sobic003G079200 Sobic008G158501 Sobic008G158501 Sobic008G158600--Sobic008G158501 Sobic002G012500 Sobic002G012500 Sobic008G158600--Sobic002G012500 Sobic002G063800 Sobic002G063800 Sobic008G158600--Sobic002G063800 Sobic008G022000 Sobic008G022000 Sobic008G158600--Sobic008G022000 Sobic008G036800 Sobic008G036800 Sobic008G158600--Sobic008G036800 Sobic006G008000 Sobic006G008000 Sobic008G158600--Sobic006G008000 Sobic001G259400 Sobic001G259400 Sobic008G158600--Sobic001G259400 Sobic002G012300--Sobic008G158600 Sobic002G012300--Sobic008G158501 Sobic002G012300--Sobic008G022000 Sobic002G012300--Sobic003G079200 Sobic002G012300--Sobic006G008000 Sobic002G012300--Sobic002G012500 Sobic008G066200 Sobic008G066200 Sobic002G012300--Sobic008G066200 Sobic002G012300--Sobic008G036800 Sobic002G012300--Sobic002G063800 Sobic003G079200--Sobic006G008000 Sobic003G079200--Sobic008G066200 Sobic003G079200--Sobic002G012300 Sobic009G145600 Sobic009G145600 Sobic003G079200--Sobic009G145600 Sobic003G079200--Sobic008G158600 Sobic003G079200--Sobic002G012500 Sobic003G079200--Sobic002G063800 Sobic004G161751 Sobic004G161751 Sobic003G079200--Sobic004G161751 Sobic005G086600 Sobic005G086600 Sobic003G079200--Sobic005G086600 Sobic008G158501--Sobic002G012300 Sobic008G158501--Sobic008G158600 Sobic008G158501--Sobic008G022000 Sobic008G158501--Sobic003G079200 Sobic008G158501--Sobic002G012500 Sobic008G158501--Sobic006G008000 Sobic008G158501--Sobic002G063800 Sobic008G158501--Sobic008G066200 Sobic008G158501--Sobic008G036800 Sobic002G012500--Sobic006G008000 Sobic002G012500--Sobic001G259400 Sobic002G012500--Sobic008G066200 Sobic002G012500--Sobic002G012300 Sobic008G066401 Sobic008G066401 Sobic002G012500--Sobic008G066401 Sobic002G012500--Sobic003G079200 Sobic002G012500--Sobic008G022000 Sobic002G012500--Sobic008G158600 Sobic002G012500--Sobic009G145600 Sobic002G063800--Sobic003G079200 Sobic006G235000 Sobic006G235000 Sobic002G063800--Sobic006G235000 Sobic010G062300 Sobic010G062300 Sobic002G063800--Sobic010G062300 Sobic002G063800--Sobic006G008000 Sobic002G063800--Sobic002G012300 Sobic002G063800--Sobic008G158600 Sobic002G063800--Sobic009G145600 Sobic002G063800--Sobic005G086600 Sobic002G063800--Sobic002G012500 Sobic008G022000--Sobic002G012300 Sobic008G022000--Sobic006G008000 Sobic008G022000--Sobic008G066200 Sobic008G022000--Sobic002G012500 Sobic008G022000--Sobic008G158501 Sobic008G022000--Sobic003G079200 Sobic008G022000--Sobic008G158600 Sobic008G022000--Sobic008G036800 Sobic003G426600 Sobic003G426600 Sobic008G022000--Sobic003G426600 Sobic008G036800--Sobic002G012300 Sobic008G036800--Sobic002G012500 Sobic008G036800--Sobic008G022000 Sobic008G036800--Sobic008G158600 Sobic008G036800--Sobic008G158501 Sobic008G036800--Sobic003G426600 Sobic008G036800--Sobic008G066200 Sobic008G036800--Sobic006G008000 Sobic002G044600 Sobic002G044600 Sobic008G036800--Sobic002G044600 Sobic006G008000--Sobic008G066200 Sobic006G008000--Sobic002G012500 Sobic006G008000--Sobic003G079200 Sobic006G008000--Sobic005G086600 Sobic006G008000--Sobic002G012300 Sobic006G008000--Sobic009G145600 Sobic009G145700 Sobic009G145700 Sobic006G008000--Sobic009G145700 Sobic006G008000--Sobic008G022000 Sobic006G008000--Sobic008G066401 Sobic001G259400--Sobic002G012500 Sobic006G007900 Sobic006G007900 Sobic001G259400--Sobic006G007900 Sobic001G259400--Sobic008G066401 Sobic001G259400--Sobic005G086600 Sobic004G064500 Sobic004G064500 Sobic001G259400--Sobic004G064500 Sobic001G259400--Sobic003G079200 Sobic001G259400--Sobic008G066200 Sobic001G259400--Sobic006G008000 Sobic001G259400--Sobic008G158600
Octagon: transcription factors


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