Gene annotation
Transcriptome id Sobic.001G162233.1
Synonym -
Functional annotation -
UniProt A0A1Z5S5U5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G292600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.005G011900 - -
3 Sobic.008G158600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
5 Sobic.010G156400 expressed protein -
6 Sobic.008G158501 - -
7 Sobic.001G539300 expressed protein -
8 Sobic.001G539300 expressed protein -
9 Sobic.001G539300 expressed protein -
10 Sobic.001G539300 expressed protein -
11 Sobic.001G539300 expressed protein -
12 Sobic.001G539300 expressed protein -
13 Sobic.002G154900 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
14 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
15 Sobic.008G184700 CND41, chloroplast nucleoid DNA binding protein, putative, expressed -
16 Sobic.008G022000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
17 Sobic.008G036800 alkylresorcinol synthase gene preferentially expressed in root hair (PubMedID : 20348430)@Chalcone and stilbene synthase family("PubMedID : 26759170,PubMedID : 24597475")@chalcone synthase, putative, expressed -
18 Sobic.001G246900 MBTB45 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.009G178550 - -
20 Sobic.005G203700 - -


Gene co-expression network
sample Sobic001G162233 Sobic001G162233 Sobic004G292600 Sobic004G292600 Sobic001G162233--Sobic004G292600 Sobic005G011900 Sobic005G011900 Sobic001G162233--Sobic005G011900 Sobic008G158600 Sobic008G158600 Sobic001G162233--Sobic008G158600 Sobic002G012300 Sobic002G012300 Sobic001G162233--Sobic002G012300 Sobic010G156400 Sobic010G156400 Sobic001G162233--Sobic010G156400 Sobic008G158501 Sobic008G158501 Sobic001G162233--Sobic008G158501 Sobic001G539300 Sobic001G539300 Sobic001G162233--Sobic001G539300 Sobic004G292600--Sobic001G539300 Sobic004G292600--Sobic001G162233 Sobic004G292600--Sobic010G156400 Sobic004G292600--Sobic005G011900 Sobic005G011900--Sobic010G156400 Sobic005G011900--Sobic001G539300 Sobic005G011900--Sobic001G162233 Sobic005G011900--Sobic004G292600 Sobic008G158600--Sobic002G012300 Sobic003G079200 Sobic003G079200 Sobic008G158600--Sobic003G079200 Sobic008G158600--Sobic008G158501 Sobic002G012500 Sobic002G012500 Sobic008G158600--Sobic002G012500 Sobic002G063800 Sobic002G063800 Sobic008G158600--Sobic002G063800 Sobic008G022000 Sobic008G022000 Sobic008G158600--Sobic008G022000 Sobic008G036800 Sobic008G036800 Sobic008G158600--Sobic008G036800 Sobic006G008000 Sobic006G008000 Sobic008G158600--Sobic006G008000 Sobic001G259400 Sobic001G259400 Sobic008G158600--Sobic001G259400 Sobic002G012300--Sobic008G158600 Sobic002G012300--Sobic008G158501 Sobic002G012300--Sobic008G022000 Sobic002G012300--Sobic003G079200 Sobic002G012300--Sobic006G008000 Sobic002G012300--Sobic002G012500 Sobic008G066200 Sobic008G066200 Sobic002G012300--Sobic008G066200 Sobic002G012300--Sobic008G036800 Sobic002G012300--Sobic002G063800 Sobic010G156400--Sobic001G539300 Sobic001G246900 Sobic001G246900 Sobic010G156400--Sobic001G246900 Sobic009G178550 Sobic009G178550 Sobic010G156400--Sobic009G178550 Sobic008G184700 Sobic008G184700 Sobic010G156400--Sobic008G184700 Sobic008G158501--Sobic002G012300 Sobic008G158501--Sobic008G158600 Sobic008G158501--Sobic008G022000 Sobic008G158501--Sobic003G079200 Sobic008G158501--Sobic002G012500 Sobic008G158501--Sobic006G008000 Sobic008G158501--Sobic002G063800 Sobic008G158501--Sobic008G066200 Sobic008G158501--Sobic008G036800 Sobic001G539300--Sobic001G539300 Sobic001G539300--Sobic010G156400 Sobic001G539300--Sobic009G178550 Sobic001G539300--Sobic008G184700 Sobic001G539300--Sobic004G292600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.