Gene annotation
Transcriptome id Sobic.008G184700.1
Synonym Sb08g022640
Functional annotation CND41, chloroplast nucleoid DNA binding protein, putative, expressed
UniProt A0A1Z5R7G7
Pfam PF14543 PF14541
Panther DB PTHR13683 PTHR13683:SF304
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G10770 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os06g20120.1 : CND41, chloroplast nucleoid DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a053305
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G414300 - -
2 Sobic.001G539300 expressed protein -
3 Sobic.001G539300 expressed protein -
4 Sobic.001G539300 expressed protein -
5 Sobic.001G539300 expressed protein -
6 Sobic.001G539300 expressed protein -
7 Sobic.001G539300 expressed protein -
8 Sobic.010G156400 expressed protein -
9 Sobic.009G178550 - -
10 Sobic.004G292600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.001G246900 MBTB45 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
12 Sobic.005G011900 - -
13 Sobic.005G203700 - -
14 Sobic.001G162233 - -
15 Sobic.008G026000 expressed protein -
16 Sobic.003G020400 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
18 Sobic.004G159500 AP2 domain containing protein, expressed K09286: EREBP-like factor
19 Sobic.006G198000 expressed protein -
20 Sobic.002G154900 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase


Gene co-expression network
sample Sobic008G184700 Sobic008G184700 Sobic001G414300 Sobic001G414300 Sobic008G184700--Sobic001G414300 Sobic001G539300 Sobic001G539300 Sobic008G184700--Sobic001G539300 Sobic010G156400 Sobic010G156400 Sobic008G184700--Sobic010G156400 Sobic009G178550 Sobic009G178550 Sobic008G184700--Sobic009G178550 Sobic001G414300--Sobic008G184700 Sobic001G414300--Sobic001G539300 Sobic001G414300--Sobic010G156400 Sobic001G414300--Sobic009G178550 Sobic001G539300--Sobic001G539300 Sobic001G539300--Sobic010G156400 Sobic001G539300--Sobic009G178550 Sobic001G539300--Sobic008G184700 Sobic004G292600 Sobic004G292600 Sobic001G539300--Sobic004G292600 Sobic010G156400--Sobic001G539300 Sobic001G246900 Sobic001G246900 Sobic010G156400--Sobic001G246900 Sobic010G156400--Sobic009G178550 Sobic010G156400--Sobic008G184700 Sobic009G178550--Sobic001G539300 Sobic005G203700 Sobic005G203700 Sobic009G178550--Sobic005G203700 Sobic009G178550--Sobic010G156400 Sobic009G178550--Sobic008G184700
Octagon: transcription factors


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