Gene annotation
| Transcriptome id | Sobic.008G026000.1 |
|---|---|
| Synonym | |
| Functional annotation | expressed protein |
| UniProt | A0A1B6PAZ4 |
| Pfam | - |
| Panther DB | PTHR33177 PTHR33177:SF1 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | - |
|---|---|
| RAP-DB (Rice) | LOC_Os12g06130.1 : expressed protein |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.006G198000 | expressed protein | - |
| 2 | Sobic.004G292600 | LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 3 | Sobic.009G197100 | O-methyltransferase, putative, expressed | - |
| 4 | Sobic.004G165100 | Up-regulation in phyB-1 mutant(PubMedID : 26893475)@RCN2 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed | - |
| 5 | Sobic.008G184700 | CND41, chloroplast nucleoid DNA binding protein, putative, expressed | - |
| 6 | Sobic.001G539300 | expressed protein | - |
| 7 | Sobic.001G539300 | expressed protein | - |
| 8 | Sobic.001G539300 | expressed protein | - |
| 9 | Sobic.001G539300 | expressed protein | - |
| 10 | Sobic.001G539300 | expressed protein | - |
| 11 | Sobic.001G539300 | expressed protein | - |
| 12 | Sobic.001G162233 | - | - |
| 13 | Sobic.003G430500 | OsCML23 - Calmodulin-related calcium sensor protein, expressed | K13448: calcium-binding protein CML |
| 14 | Sobic.001G246900 | MBTB45 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed | K10523: speckle-type POZ protein |
| 15 | Sobic.008G036800 | alkylresorcinol synthase gene preferentially expressed in root hair (PubMedID : 20348430)@Chalcone and stilbene synthase family("PubMedID : 26759170,PubMedID : 24597475")@chalcone synthase, putative, expressed | - |
| 16 | Sobic.001G414300 | - | - |
| 17 | Sobic.001G062132 | - | - |
| 18 | Sobic.010G156400 | expressed protein | - |
| 19 | Sobic.002G044600 | plastocyanin-like domain containing protein, putative, expressed | - |
| 20 | Sobic.009G178550 | - | - |
Gene co-expression network
Octagon: transcription factors
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