Gene annotation
Transcriptome id Sobic.006G198000.1
Synonym Sb06g027020
Functional annotation expressed protein
UniProt C5YF06
Pfam PF12442
Panther DB PTHR33530
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g58460.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G026000 expressed protein -
2 Sobic.004G292600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.009G197100 O-methyltransferase, putative, expressed -
4 Sobic.001G162233 - -
5 Sobic.001G246900 MBTB45 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
6 Sobic.001G539300 expressed protein -
7 Sobic.001G539300 expressed protein -
8 Sobic.001G539300 expressed protein -
9 Sobic.001G539300 expressed protein -
10 Sobic.001G539300 expressed protein -
11 Sobic.001G539300 expressed protein -
12 Sobic.008G036800 alkylresorcinol synthase gene preferentially expressed in root hair (PubMedID : 20348430)@Chalcone and stilbene synthase family("PubMedID : 26759170,PubMedID : 24597475")@chalcone synthase, putative, expressed -
13 Sobic.001G062132 - -
14 Sobic.010G156400 expressed protein -
15 Sobic.008G158600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.004G165100 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@RCN2 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
17 Sobic.001G487600 Lectin protein kinase family protein("PubMedID : 26759170,PubMedID : 24597475")@protein kinase domain containing protein, expressed -
18 Sobic.002G044600 plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.008G158501 - -
20 Sobic.008G184700 CND41, chloroplast nucleoid DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic006G198000 Sobic006G198000 Sobic008G026000 Sobic008G026000 Sobic006G198000--Sobic008G026000 Sobic004G292600 Sobic004G292600 Sobic006G198000--Sobic004G292600 Sobic009G197100 Sobic009G197100 Sobic006G198000--Sobic009G197100 Sobic001G162233 Sobic001G162233 Sobic006G198000--Sobic001G162233 Sobic001G246900 Sobic001G246900 Sobic006G198000--Sobic001G246900 Sobic001G539300 Sobic001G539300 Sobic006G198000--Sobic001G539300 Sobic008G026000--Sobic006G198000 Sobic008G026000--Sobic004G292600 Sobic008G026000--Sobic009G197100 Sobic004G165100 Sobic004G165100 Sobic008G026000--Sobic004G165100 Sobic008G184700 Sobic008G184700 Sobic008G026000--Sobic008G184700 Sobic008G026000--Sobic001G539300 Sobic004G292600--Sobic001G539300 Sobic004G292600--Sobic001G162233 Sobic010G156400 Sobic010G156400 Sobic004G292600--Sobic010G156400 Sobic005G011900 Sobic005G011900 Sobic004G292600--Sobic005G011900 Sobic009G197100--Sobic006G198000 Sobic009G197100--Sobic008G026000 Sobic009G197100--Sobic004G292600 Sobic008G036800 Sobic008G036800 Sobic009G197100--Sobic008G036800 Sobic002G044600 Sobic002G044600 Sobic009G197100--Sobic002G044600 Sobic009G197100--Sobic001G162233 Sobic009G197100--Sobic001G539300 Sobic001G162233--Sobic004G292600 Sobic001G162233--Sobic005G011900 Sobic008G158600 Sobic008G158600 Sobic001G162233--Sobic008G158600 Sobic002G012300 Sobic002G012300 Sobic001G162233--Sobic002G012300 Sobic001G162233--Sobic010G156400 Sobic008G158501 Sobic008G158501 Sobic001G162233--Sobic008G158501 Sobic001G162233--Sobic001G539300 Sobic001G246900--Sobic010G156400 Sobic001G246900--Sobic001G539300 Sobic001G246900--Sobic008G184700 Sobic001G246900--Sobic004G292600 Sobic001G539300--Sobic001G539300 Sobic001G539300--Sobic010G156400 Sobic009G178550 Sobic009G178550 Sobic001G539300--Sobic009G178550 Sobic001G539300--Sobic008G184700 Sobic001G539300--Sobic004G292600
Octagon: transcription factors


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