Gene annotation
Transcriptome id Sobic.001G487600.1
Synonym Sb01g045620
Functional annotation Lectin protein kinase family protein( (PubMedID : 26759170,(PubMedID : 24597475)
protein kinase domain containing protein, expressed
UniProt C5WVW9
Pfam PF00069
Panther DB PTHR27009 PTHR27009:SF15
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G34300 : lectin protein kinase family protein
RAP-DB (Rice) LOC_Os07g04810.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009482 , Zm00025a009483 , Zm00025a000869 , Zm00025a057249
Brachypodium KQJ85080 , KQK21006 , KQK21007 , KQK21008 , KQJ85076 , KQJ85078 , KQJ85079 , KQJ93794 , KQK21010
Barley HORVU2Hr1G017910.2 , HORVU2Hr1G017910.3 , HORVU2Hr1G017910.1 , HORVU2Hr1G017910.6 , HORVU2Hr1G017910.7 , HORVU2Hr1G017910.4 , HORVU2Hr1G017910.5 , HORVU6Hr1G074690.4 , HORVU2Hr1G111780.2 , HORVU2Hr1G111780.3 , HORVU2Hr1G111780.1 , HORVU2Hr1G111780.4 , HORVU2Hr1G111780.5 , HORVU6Hr1G074690.2 , HORVU6Hr1G074690.1 , HORVU2Hr1G111760.1 , HORVU2Hr1G111760.2 , HORVU2Hr1G111760.3 , HORVU2Hr1G111760.4
Wheat TraesCS2A02G427900 , TraesCS7B02G463700 , TraesCS2A02G503800 , TraesCS6A02G301300 , TraesCS2D02G504300 , TraesCS2B02G532100 , TraesCS2D02G105900 , TraesCS2D02G504400 , TraesCS6D02G280700 , TraesCS2D02G425900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G426600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.001G280800 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.002G012500 DUF538 domain containing protein, putative, expressed -
4 Sobic.008G036800 alkylresorcinol synthase gene preferentially expressed in root hair (PubMedID : 20348430)@Chalcone and stilbene synthase family("PubMedID : 26759170,PubMedID : 24597475")@chalcone synthase, putative, expressed -
5 Sobic.003G376100 4,5-DOPA dioxygenase extradiol, putative, expressed K15777: 4,5-DOPA dioxygenase extradiol
6 Sobic.004G022900 expressed protein -
7 Sobic.008G022000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
8 Sobic.008G158600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
11 Sobic.008G066200 expressed protein -
12 Sobic.009G171500 expressed protein -
13 Sobic.008G158501 - -
14 Sobic.008G066401 - -
15 Sobic.006G132800 expressed protein -
16 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.006G010200 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
18 Sobic.004G165100 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@RCN2 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
19 Sobic.004G004400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00016: LDH, L-lactate dehydrogenase
20 Sobic.003G079200 - -


Gene co-expression network
sample Sobic001G487600 Sobic001G487600 Sobic003G426600 Sobic003G426600 Sobic001G487600--Sobic003G426600 Sobic001G280800 Sobic001G280800 Sobic001G487600--Sobic001G280800 Sobic002G012500 Sobic002G012500 Sobic001G487600--Sobic002G012500 Sobic008G036800 Sobic008G036800 Sobic001G487600--Sobic008G036800 Sobic003G376100 Sobic003G376100 Sobic001G487600--Sobic003G376100 Sobic004G022900 Sobic004G022900 Sobic001G487600--Sobic004G022900 Sobic008G022000 Sobic008G022000 Sobic001G487600--Sobic008G022000 Sobic008G158600 Sobic008G158600 Sobic001G487600--Sobic008G158600 Sobic009G145600 Sobic009G145600 Sobic001G487600--Sobic009G145600 Sobic006G008000 Sobic006G008000 Sobic003G426600--Sobic006G008000 Sobic003G426600--Sobic002G012500 Sobic003G426600--Sobic008G022000 Sobic002G012300 Sobic002G012300 Sobic003G426600--Sobic002G012300 Sobic010G082600 Sobic010G082600 Sobic003G426600--Sobic010G082600 Sobic009G171500 Sobic009G171500 Sobic003G426600--Sobic009G171500 Sobic010G196000 Sobic010G196000 Sobic003G426600--Sobic010G196000 Sobic008G066200 Sobic008G066200 Sobic003G426600--Sobic008G066200 Sobic004G141100 Sobic004G141100 Sobic003G426600--Sobic004G141100 Sobic010G198600 Sobic010G198600 Sobic001G280800--Sobic010G198600 Sobic004G336500 Sobic004G336500 Sobic001G280800--Sobic004G336500 Sobic001G279300 Sobic001G279300 Sobic001G280800--Sobic001G279300 Sobic009G069800 Sobic009G069800 Sobic001G280800--Sobic009G069800 Sobic004G004400 Sobic004G004400 Sobic001G280800--Sobic004G004400 Sobic010G225251 Sobic010G225251 Sobic001G280800--Sobic010G225251 Sobic009G145700 Sobic009G145700 Sobic001G280800--Sobic009G145700 Sobic008G066401 Sobic008G066401 Sobic001G280800--Sobic008G066401 Sobic004G109900 Sobic004G109900 Sobic001G280800--Sobic004G109900 Sobic002G012500--Sobic006G008000 Sobic001G259400 Sobic001G259400 Sobic002G012500--Sobic001G259400 Sobic002G012500--Sobic008G066200 Sobic002G012500--Sobic002G012300 Sobic002G012500--Sobic008G066401 Sobic003G079200 Sobic003G079200 Sobic002G012500--Sobic003G079200 Sobic002G012500--Sobic008G022000 Sobic002G012500--Sobic008G158600 Sobic002G012500--Sobic009G145600 Sobic008G036800--Sobic002G012300 Sobic008G036800--Sobic002G012500 Sobic008G036800--Sobic008G022000 Sobic008G036800--Sobic008G158600 Sobic008G158501 Sobic008G158501 Sobic008G036800--Sobic008G158501 Sobic008G036800--Sobic003G426600 Sobic008G036800--Sobic008G066200 Sobic008G036800--Sobic006G008000 Sobic002G044600 Sobic002G044600 Sobic008G036800--Sobic002G044600 Sobic003G376100--Sobic004G141100 Sobic003G376100--Sobic009G145600 Sobic003G376100--Sobic008G066401 Sobic003G376100--Sobic009G145700 Sobic009G200566 Sobic009G200566 Sobic003G376100--Sobic009G200566 Sobic003G376100--Sobic003G426600 Sobic003G376100--Sobic006G008000 Sobic006G054800 Sobic006G054800 Sobic003G376100--Sobic006G054800 Sobic003G043500 Sobic003G043500 Sobic003G376100--Sobic003G043500 Sobic005G069800 Sobic005G069800 Sobic004G022900--Sobic005G069800 Sobic004G022900--Sobic001G487600 Sobic005G070200 Sobic005G070200 Sobic004G022900--Sobic005G070200 Sobic006G162100 Sobic006G162100 Sobic004G022900--Sobic006G162100 Sobic005G069700 Sobic005G069700 Sobic004G022900--Sobic005G069700 Sobic004G316350 Sobic004G316350 Sobic004G022900--Sobic004G316350 Sobic001G242000 Sobic001G242000 Sobic004G022900--Sobic001G242000 Sobic007G215600 Sobic007G215600 Sobic004G022900--Sobic007G215600 Sobic001G462700 Sobic001G462700 Sobic004G022900--Sobic001G462700 Sobic008G022000--Sobic002G012300 Sobic008G022000--Sobic006G008000 Sobic008G022000--Sobic008G066200 Sobic008G022000--Sobic002G012500 Sobic008G022000--Sobic008G158501 Sobic008G022000--Sobic003G079200 Sobic008G022000--Sobic008G158600 Sobic008G022000--Sobic008G036800 Sobic008G022000--Sobic003G426600 Sobic008G158600--Sobic002G012300 Sobic008G158600--Sobic003G079200 Sobic008G158600--Sobic008G158501 Sobic008G158600--Sobic002G012500 Sobic002G063800 Sobic002G063800 Sobic008G158600--Sobic002G063800 Sobic008G158600--Sobic008G022000 Sobic008G158600--Sobic008G036800 Sobic008G158600--Sobic006G008000 Sobic008G158600--Sobic001G259400 Sobic009G145600--Sobic009G145700 Sobic009G145600--Sobic008G066401 Sobic009G145600--Sobic008G066200 Sobic009G145600--Sobic003G079200 Sobic009G145600--Sobic006G008000 Sobic009G145600--Sobic003G043500 Sobic004G245700 Sobic004G245700 Sobic009G145600--Sobic004G245700 Sobic009G145600--Sobic002G012500 Sobic009G145600--Sobic009G200566
Octagon: transcription factors


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