Gene annotation
Transcriptome id Sobic.008G022000.1,Sobic.008G022000.2
Synonym G-TMT, Sb08g001960, VTE4, TMT1
Functional annotation Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed
UniProt A0A1B6PBR1 , A0A1B6PAV1
Pfam PF08241
Panther DB PTHR10108 PTHR10108:SF708
NCBI CDD KOG1269; SAM-dependent methyltransferases
KEGG Orthology K05928; tocopherol O-methyltransferase
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G64970 : gamma-tocopherol methyltransferase
RAP-DB (Rice) LOC_Os02g47310.1 : Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed
MaizeGDB (Corn) Zm00025a021689
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
2 Sobic.006G008000 O-methyltransferase, putative, expressed -
3 Sobic.008G066200 expressed protein -
4 Sobic.002G012500 DUF538 domain containing protein, putative, expressed -
5 Sobic.008G158501 - -
6 Sobic.003G079200 - -
7 Sobic.008G158600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.008G036800 alkylresorcinol synthase gene preferentially expressed in root hair (PubMedID : 20348430)@Chalcone and stilbene synthase family("PubMedID : 26759170,PubMedID : 24597475")@chalcone synthase, putative, expressed -
9 Sobic.003G426600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.001G114900 - -
12 Sobic.002G369400 Sulfotransferase family protein (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
13 Sobic.002G294000 purine permease, putative, expressed -
14 Sobic.002G063800 transferase family protein, putative, expressed -
15 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.008G158800 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.001G188800 cysteine-rich repeat secretory protein 55 precursor, putative, expressed -
18 Sobic.010G062300 plant protein of unknown function domain containing protein, expressed -
19 Sobic.003G313100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.008G066401 - -


Gene co-expression network
sample Sobic008G022000 Sobic008G022000 Sobic002G012300 Sobic002G012300 Sobic008G022000--Sobic002G012300 Sobic006G008000 Sobic006G008000 Sobic008G022000--Sobic006G008000 Sobic008G066200 Sobic008G066200 Sobic008G022000--Sobic008G066200 Sobic002G012500 Sobic002G012500 Sobic008G022000--Sobic002G012500 Sobic008G158501 Sobic008G158501 Sobic008G022000--Sobic008G158501 Sobic003G079200 Sobic003G079200 Sobic008G022000--Sobic003G079200 Sobic008G158600 Sobic008G158600 Sobic008G022000--Sobic008G158600 Sobic008G036800 Sobic008G036800 Sobic008G022000--Sobic008G036800 Sobic003G426600 Sobic003G426600 Sobic008G022000--Sobic003G426600 Sobic002G012300--Sobic008G158600 Sobic002G012300--Sobic008G158501 Sobic002G012300--Sobic008G022000 Sobic002G012300--Sobic003G079200 Sobic002G012300--Sobic006G008000 Sobic002G012300--Sobic002G012500 Sobic002G012300--Sobic008G066200 Sobic002G012300--Sobic008G036800 Sobic002G063800 Sobic002G063800 Sobic002G012300--Sobic002G063800 Sobic006G008000--Sobic008G066200 Sobic006G008000--Sobic002G012500 Sobic006G008000--Sobic003G079200 Sobic005G086600 Sobic005G086600 Sobic006G008000--Sobic005G086600 Sobic006G008000--Sobic002G012300 Sobic009G145600 Sobic009G145600 Sobic006G008000--Sobic009G145600 Sobic009G145700 Sobic009G145700 Sobic006G008000--Sobic009G145700 Sobic006G008000--Sobic008G022000 Sobic008G066401 Sobic008G066401 Sobic006G008000--Sobic008G066401 Sobic008G066200--Sobic006G008000 Sobic008G066200--Sobic002G012500 Sobic008G066200--Sobic009G145700 Sobic008G066200--Sobic003G079200 Sobic008G066200--Sobic009G145600 Sobic008G066200--Sobic008G066401 Sobic008G066200--Sobic008G022000 Sobic008G066200--Sobic002G012300 Sobic001G188800 Sobic001G188800 Sobic008G066200--Sobic001G188800 Sobic002G012500--Sobic006G008000 Sobic001G259400 Sobic001G259400 Sobic002G012500--Sobic001G259400 Sobic002G012500--Sobic008G066200 Sobic002G012500--Sobic002G012300 Sobic002G012500--Sobic008G066401 Sobic002G012500--Sobic003G079200 Sobic002G012500--Sobic008G022000 Sobic002G012500--Sobic008G158600 Sobic002G012500--Sobic009G145600 Sobic008G158501--Sobic002G012300 Sobic008G158501--Sobic008G158600 Sobic008G158501--Sobic008G022000 Sobic008G158501--Sobic003G079200 Sobic008G158501--Sobic002G012500 Sobic008G158501--Sobic006G008000 Sobic008G158501--Sobic002G063800 Sobic008G158501--Sobic008G066200 Sobic008G158501--Sobic008G036800 Sobic003G079200--Sobic006G008000 Sobic003G079200--Sobic008G066200 Sobic003G079200--Sobic002G012300 Sobic003G079200--Sobic009G145600 Sobic003G079200--Sobic008G158600 Sobic003G079200--Sobic002G012500 Sobic003G079200--Sobic002G063800 Sobic004G161751 Sobic004G161751 Sobic003G079200--Sobic004G161751 Sobic003G079200--Sobic005G086600 Sobic008G158600--Sobic002G012300 Sobic008G158600--Sobic003G079200 Sobic008G158600--Sobic008G158501 Sobic008G158600--Sobic002G012500 Sobic008G158600--Sobic002G063800 Sobic008G158600--Sobic008G022000 Sobic008G158600--Sobic008G036800 Sobic008G158600--Sobic006G008000 Sobic008G158600--Sobic001G259400 Sobic008G036800--Sobic002G012300 Sobic008G036800--Sobic002G012500 Sobic008G036800--Sobic008G022000 Sobic008G036800--Sobic008G158600 Sobic008G036800--Sobic008G158501 Sobic008G036800--Sobic003G426600 Sobic008G036800--Sobic008G066200 Sobic008G036800--Sobic006G008000 Sobic002G044600 Sobic002G044600 Sobic008G036800--Sobic002G044600 Sobic003G426600--Sobic006G008000 Sobic003G426600--Sobic002G012500 Sobic003G426600--Sobic008G022000 Sobic003G426600--Sobic002G012300 Sobic010G082600 Sobic010G082600 Sobic003G426600--Sobic010G082600 Sobic009G171500 Sobic009G171500 Sobic003G426600--Sobic009G171500 Sobic010G196000 Sobic010G196000 Sobic003G426600--Sobic010G196000 Sobic003G426600--Sobic008G066200 Sobic004G141100 Sobic004G141100 Sobic003G426600--Sobic004G141100
Octagon: transcription factors


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