Gene annotation
Transcriptome id Sobic.008G066200.1
Synonym ATCPNIFS, CPNIFS, ATNFS2, SUFS, ATSUFS, Sb08g005510
Functional annotation expressed protein
UniProt A0A1B6PBN6
Pfam PF00266
Panther DB PTHR11601 PTHR11601:SF46
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G08490 : chloroplastic NIFS-like cysteine desulfurase
RAP-DB (Rice) LOC_Os12g08850.1 : expressed protein
MaizeGDB (Corn) Zm00025a029625
Brachypodium KQJ89002 , PNT65335
Barley HORVU4Hr1G016990.3 , HORVU4Hr1G016990.2 , HORVU4Hr1G016990.6 , HORVU4Hr1G016990.5 , HORVU4Hr1G016990.4 , HORVU2Hr1G086050.8 , HORVU2Hr1G086050.5 , HORVU2Hr1G086050.4 , HORVU2Hr1G086050.1 , HORVU2Hr1G086050.3 , HORVU2Hr1G086050.2 , HORVU3Hr1G069210.1
Wheat TraesCS2B02G404800 , TraesCS4D02G102400 , TraesCS2A02G355700 , TraesCS4B02G105600 , TraesCS2D02G352600 , TraesCS3B02G316300 , TraesCS2B02G372600 , TraesCS2D02G384200 , TraesCS2D02G384000 , TraesCS3D02G282600 , TraesCS4A02G201400 , TraesCS2D02G384500 , TraesCS2D02G139200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G008000 O-methyltransferase, putative, expressed -
2 Sobic.002G012500 DUF538 domain containing protein, putative, expressed -
3 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.003G079200 - -
5 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.008G066401 - -
7 Sobic.008G022000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
8 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
9 Sobic.001G188800 cysteine-rich repeat secretory protein 55 precursor, putative, expressed -
10 Sobic.005G086600 O-methyltransferase, putative, expressed -
11 Sobic.003G313100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.001G259400 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
13 Sobic.004G109900 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.008G158501 - -
15 Sobic.004G161751 - -
16 Sobic.009G200566 - -
17 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
18 Sobic.010G082600 EF hand family protein, putative, expressed -
19 Sobic.006G101100 expressed protein -
20 Sobic.003G426600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic008G066200 Sobic008G066200 Sobic006G008000 Sobic006G008000 Sobic008G066200--Sobic006G008000 Sobic002G012500 Sobic002G012500 Sobic008G066200--Sobic002G012500 Sobic009G145700 Sobic009G145700 Sobic008G066200--Sobic009G145700 Sobic003G079200 Sobic003G079200 Sobic008G066200--Sobic003G079200 Sobic009G145600 Sobic009G145600 Sobic008G066200--Sobic009G145600 Sobic008G066401 Sobic008G066401 Sobic008G066200--Sobic008G066401 Sobic008G022000 Sobic008G022000 Sobic008G066200--Sobic008G022000 Sobic002G012300 Sobic002G012300 Sobic008G066200--Sobic002G012300 Sobic001G188800 Sobic001G188800 Sobic008G066200--Sobic001G188800 Sobic006G008000--Sobic008G066200 Sobic006G008000--Sobic002G012500 Sobic006G008000--Sobic003G079200 Sobic005G086600 Sobic005G086600 Sobic006G008000--Sobic005G086600 Sobic006G008000--Sobic002G012300 Sobic006G008000--Sobic009G145600 Sobic006G008000--Sobic009G145700 Sobic006G008000--Sobic008G022000 Sobic006G008000--Sobic008G066401 Sobic002G012500--Sobic006G008000 Sobic001G259400 Sobic001G259400 Sobic002G012500--Sobic001G259400 Sobic002G012500--Sobic008G066200 Sobic002G012500--Sobic002G012300 Sobic002G012500--Sobic008G066401 Sobic002G012500--Sobic003G079200 Sobic002G012500--Sobic008G022000 Sobic008G158600 Sobic008G158600 Sobic002G012500--Sobic008G158600 Sobic002G012500--Sobic009G145600 Sobic009G145700--Sobic009G145600 Sobic009G145700--Sobic008G066401 Sobic009G145700--Sobic008G066200 Sobic009G145700--Sobic006G008000 Sobic001G112200 Sobic001G112200 Sobic009G145700--Sobic001G112200 Sobic003G043600 Sobic003G043600 Sobic009G145700--Sobic003G043600 Sobic003G043500 Sobic003G043500 Sobic009G145700--Sobic003G043500 Sobic009G184000 Sobic009G184000 Sobic009G145700--Sobic009G184000 Sobic009G145700--Sobic003G079200 Sobic003G079200--Sobic006G008000 Sobic003G079200--Sobic008G066200 Sobic003G079200--Sobic002G012300 Sobic003G079200--Sobic009G145600 Sobic003G079200--Sobic008G158600 Sobic003G079200--Sobic002G012500 Sobic002G063800 Sobic002G063800 Sobic003G079200--Sobic002G063800 Sobic004G161751 Sobic004G161751 Sobic003G079200--Sobic004G161751 Sobic003G079200--Sobic005G086600 Sobic009G145600--Sobic009G145700 Sobic009G145600--Sobic008G066401 Sobic009G145600--Sobic008G066200 Sobic009G145600--Sobic003G079200 Sobic009G145600--Sobic006G008000 Sobic009G145600--Sobic003G043500 Sobic004G245700 Sobic004G245700 Sobic009G145600--Sobic004G245700 Sobic009G145600--Sobic002G012500 Sobic009G200566 Sobic009G200566 Sobic009G145600--Sobic009G200566 Sobic008G066401--Sobic009G145700 Sobic008G066401--Sobic009G145600 Sobic008G066401--Sobic008G066200 Sobic008G066401--Sobic002G012500 Sobic007G169700 Sobic007G169700 Sobic008G066401--Sobic007G169700 Sobic008G066401--Sobic009G184000 Sobic008G066401--Sobic006G008000 Sobic008G066401--Sobic003G043500 Sobic003G362700 Sobic003G362700 Sobic008G066401--Sobic003G362700 Sobic008G022000--Sobic002G012300 Sobic008G022000--Sobic006G008000 Sobic008G022000--Sobic008G066200 Sobic008G022000--Sobic002G012500 Sobic008G158501 Sobic008G158501 Sobic008G022000--Sobic008G158501 Sobic008G022000--Sobic003G079200 Sobic008G022000--Sobic008G158600 Sobic008G036800 Sobic008G036800 Sobic008G022000--Sobic008G036800 Sobic003G426600 Sobic003G426600 Sobic008G022000--Sobic003G426600 Sobic002G012300--Sobic008G158600 Sobic002G012300--Sobic008G158501 Sobic002G012300--Sobic008G022000 Sobic002G012300--Sobic003G079200 Sobic002G012300--Sobic006G008000 Sobic002G012300--Sobic002G012500 Sobic002G012300--Sobic008G066200 Sobic002G012300--Sobic008G036800 Sobic002G012300--Sobic002G063800 Sobic001G188800--Sobic006G008000 Sobic001G188800--Sobic008G066200 Sobic001G188800--Sobic005G086600 Sobic001G188800--Sobic003G079200 Sobic001G188800--Sobic002G012300 Sobic001G188800--Sobic008G022000 Sobic001G188800--Sobic004G161751 Sobic001G188800--Sobic002G012500 Sobic001G114900 Sobic001G114900 Sobic001G188800--Sobic001G114900
Octagon: transcription factors


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